RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 COL6A1P12109 1028 aa7.61□□□□□ -1.19
CCDC6-203ENST00000518638 AFMP43652 599 aa7.61□□□□□ -1.19
CCDC6-203ENST00000518638 CACNB3P54284 484 aa7.61□□□□□ -1.19
CCDC6-203ENST00000518638 YARSP54577 528 aaKnown RBP7.61□□□□□ -1.19
CCDC6-203ENST00000518638 CASP7P55210 303 aa7.61□□□□□ -1.19
CCDC6-203ENST00000518638 APOBEC3HQ6NTF7 200 aaKnown RBP7.61□□□□□ -1.19
CCDC6-203ENST00000518638 PRR23BQ6ZRT6 265 aa7.61□□□□□ -1.19
CCDC6-203ENST00000518638 FAM214BQ7L5A3 538 aa7.61□□□□□ -1.19
CCDC6-203ENST00000518638 SLFN12Q8IYM2 578 aa7.61□□□□□ -1.19
CCDC6-203ENST00000518638 ANKRD13CQ8N6S4 541 aa7.61□□□□□ -1.19
CCDC6-203ENST00000518638 DNAAF4Q8WXU2 420 aa7.61□□□□□ -1.19
CCDC6-203ENST00000518638 FAM84BQ96KN1 310 aaPredicted RBP7.61□□□□□ -1.19
CCDC6-203ENST00000518638 DPH2Q9BQC3 489 aaPredicted RBP7.61□□□□□ -1.19
CCDC6-203ENST00000518638 CTNND2Q9UQB3 1225 aa7.61□□□□□ -1.19
CCDC6-203ENST00000518638 ZHX2Q9Y6X8 837 aa7.61□□□□□ -1.19
CCDC6-203ENST00000518638 MROH5Q6ZUA9 1318 aa7.6□□□□□ -1.19
CCDC6-203ENST00000518638 UPK3BL1B0FP48 263 aa7.6□□□□□ -1.19
CCDC6-203ENST00000518638 UPK3BL2E5RIL1 263 aa7.6□□□□□ -1.19
CCDC6-203ENST00000518638 MSCO60682 206 aa7.6□□□□□ -1.19
CCDC6-203ENST00000518638 DNAJA2O60884 412 aa7.6□□□□□ -1.19
CCDC6-203ENST00000518638 GLI1P08151 1106 aa7.6□□□□□ -1.19
CCDC6-203ENST00000518638 CDK11BP21127 795 aaKnown RBP7.6□□□□□ -1.19
CCDC6-203ENST00000518638 ERCC5P28715 1186 aaPredicted RBP7.6□□□□□ -1.19
CCDC6-203ENST00000518638 MCM4P33991 863 aa7.6□□□□□ -1.19
CCDC6-203ENST00000518638 ZEB1P37275 1124 aaPredicted RBP7.6□□□□□ -1.19
CCDC6-203ENST00000518638 GYG1P46976 350 aa7.6□□□□□ -1.19
CCDC6-203ENST00000518638 CLCQ05315 142 aa7.6□□□□□ -1.19
CCDC6-203ENST00000518638 CHAF1AQ13111 956 aaPredicted RBP7.6□□□□□ -1.19
CCDC6-203ENST00000518638 IKZF1Q13422 519 aa7.6□□□□□ -1.19
CCDC6-203ENST00000518638 MAP3K21Q5TCX8 1036 aa7.6□□□□□ -1.19
CCDC6-203ENST00000518638 LETMD1Q6P1Q0 360 aa7.6□□□□□ -1.19
CCDC6-203ENST00000518638 GK5Q6ZS86 529 aa7.6□□□□□ -1.19
CCDC6-203ENST00000518638 CCDC146Q8IYE0 955 aa7.6□□□□□ -1.19
CCDC6-203ENST00000518638 RASGRP4Q8TDF6 673 aa7.6□□□□□ -1.19
CCDC6-203ENST00000518638 ATXN2LQ8WWM7 1075 aaKnown RBP7.6□□□□□ -1.19
CCDC6-203ENST00000518638 SPATA32Q96LK8 384 aa7.6□□□□□ -1.19
CCDC6-203ENST00000518638 HEXIM2Q96MH2 286 aaKnown RBP7.6□□□□□ -1.19
CCDC6-203ENST00000518638 C1QTNF1Q9BXJ1 281 aa7.6□□□□□ -1.19
CCDC6-203ENST00000518638 TNKS2Q9H2K2 1166 aa7.6□□□□□ -1.19
CCDC6-203ENST00000518638 CCSER2Q9H7U1 834 aa7.6□□□□□ -1.19
CCDC6-203ENST00000518638 GTF2IRD1Q9UHL9 959 aa7.6□□□□□ -1.19
CCDC6-203ENST00000518638 AFG3L2Q9Y4W6 797 aa7.6□□□□□ -1.19
CCDC6-203ENST00000518638 SNX11Q9Y5W9 270 aa7.6□□□□□ -1.19
CCDC6-203ENST00000518638 LOC285556D6RIA3 1793 aa7.6□□□□□ -1.19
CCDC6-203ENST00000518638 LTBP2Q14767 1821 aa7.59□□□□□ -1.19
CCDC6-203ENST00000518638 CTNND1O60716 968 aaKnown RBP7.59□□□□□ -1.19
CCDC6-203ENST00000518638 KRT1P04264 644 aa7.59□□□□□ -1.19
CCDC6-203ENST00000518638 ZKSCAN1P17029 563 aaPredicted RBP7.59□□□□□ -1.19
CCDC6-203ENST00000518638 ITIH2P19823 946 aa7.59□□□□□ -1.19
CCDC6-203ENST00000518638 ZP2Q05996 745 aa7.59□□□□□ -1.19
CCDC6-203ENST00000518638 LRRC26Q2I0M4 334 aa7.59□□□□□ -1.19
CCDC6-203ENST00000518638 WDR66Q8TBY9 1149 aa7.59□□□□□ -1.19
CCDC6-203ENST00000518638 CYB5D2Q8WUJ1 264 aa7.59□□□□□ -1.19
CCDC6-203ENST00000518638 ASB11Q8WXH4 323 aa7.59□□□□□ -1.19
CCDC6-203ENST00000518638 MYLIPQ8WY64 445 aa7.59□□□□□ -1.19
CCDC6-203ENST00000518638 GPRASP2Q96D09 838 aa7.59□□□□□ -1.19
CCDC6-203ENST00000518638 DRC1Q96MC2 740 aa7.59□□□□□ -1.19
CCDC6-203ENST00000518638 ACBD3Q9H3P7 528 aa7.59□□□□□ -1.19
CCDC6-203ENST00000518638 KLHL3Q9UH77 587 aa7.59□□□□□ -1.19
CCDC6-203ENST00000518638 MAPK8IP1Q9UQF2 711 aa7.59□□□□□ -1.19
CCDC6-203ENST00000518638 LRRFIP2Q9Y608 721 aaKnown RBP7.59□□□□□ -1.19
CCDC6-203ENST00000518638 FRMPD3Q5JV73 1810 aa7.59□□□□□ -1.19
CCDC6-203ENST00000518638 PHIPQ8WWQ0 1821 aa7.59□□□□□ -1.19
CCDC6-203ENST00000518638 VCANP13611 3396 aa7.59□□□□□ -1.2
CCDC6-203ENST00000518638 CHURC1-FNTBB4DL54 471 aa7.58□□□□□ -1.2
CCDC6-203ENST00000518638 FOXO4P98177 505 aa7.58□□□□□ -1.2
CCDC6-203ENST00000518638 TCP10Q12799 353 aa7.58□□□□□ -1.2
CCDC6-203ENST00000518638 MAP3K12Q12852 859 aa7.58□□□□□ -1.2
CCDC6-203ENST00000518638 COL9A2Q14055 689 aaPredicted RBP7.58□□□□□ -1.2
CCDC6-203ENST00000518638 FYB2Q5VWT5 728 aa7.58□□□□□ -1.2
CCDC6-203ENST00000518638 ZNF746Q6NUN9 644 aaPredicted RBP7.58□□□□□ -1.2
CCDC6-203ENST00000518638 LMBR1LQ6UX01 489 aa7.58□□□□□ -1.2
CCDC6-203ENST00000518638 C8orf58Q8NAV2 365 aa7.58□□□□□ -1.2
CCDC6-203ENST00000518638 FBXO15Q8NCQ5 510 aaPredicted RBP7.58□□□□□ -1.2
CCDC6-203ENST00000518638 RIN3Q8TB24 985 aa7.58□□□□□ -1.2
CCDC6-203ENST00000518638 SREK1Q8WXA9 508 aaKnown RBP7.58□□□□□ -1.2
CCDC6-203ENST00000518638 TRIB2Q92519 343 aa7.58□□□□□ -1.2
CCDC6-203ENST00000518638 PRDM5Q9NQX1 630 aaPredicted RBP7.58□□□□□ -1.2
CCDC6-203ENST00000518638 GMIPQ9P107 970 aa7.58□□□□□ -1.2
CCDC6-203ENST00000518638 MORF4L1Q9UBU8 362 aa7.58□□□□□ -1.2
CCDC6-203ENST00000518638 GJD2Q9UKL4 321 aa7.58□□□□□ -1.2
CCDC6-203ENST00000518638 MYBBP1AQ9BQG0 1328 aaKnown RBP7.57□□□□□ -1.2
CCDC6-203ENST00000518638 TRIM75PA6NK02 468 aa7.57□□□□□ -1.2
CCDC6-203ENST00000518638 SLC22A31A6NKX4 558 aa7.57□□□□□ -1.2
CCDC6-203ENST00000518638 MEIS3P2A8K0S8 358 aa7.57□□□□□ -1.2
CCDC6-203ENST00000518638 NPIPB6E9PJ23 425 aa7.57□□□□□ -1.2
CCDC6-203ENST00000518638 DNM1LO00429 736 aa7.57□□□□□ -1.2
CCDC6-203ENST00000518638 ENTPD3O75355 529 aa7.57□□□□□ -1.2
CCDC6-203ENST00000518638 IFIT1P09914 478 aaKnown RBP7.57□□□□□ -1.2
CCDC6-203ENST00000518638 MAPK4P31152 587 aa7.57□□□□□ -1.2
CCDC6-203ENST00000518638 RGS2P41220 211 aa7.57□□□□□ -1.2
CCDC6-203ENST00000518638 C22orf34Q6ZV56 151 aa7.57□□□□□ -1.2
CCDC6-203ENST00000518638 CCAR1Q8IX12 1150 aaKnown RBP7.57□□□□□ -1.2
CCDC6-203ENST00000518638 DNAJB8Q8NHS0 232 aa7.57□□□□□ -1.2
CCDC6-203ENST00000518638 KIRREL1Q96J84 757 aa7.57□□□□□ -1.2
CCDC6-203ENST00000518638 THEGQ9P2T0 379 aa7.57□□□□□ -1.2
CCDC6-203ENST00000518638 TPX2Q9ULW0 747 aaKnown RBP7.57□□□□□ -1.2
CCDC6-203ENST00000518638 ATRNL1Q5VV63 1379 aa7.57□□□□□ -1.2
CCDC6-203ENST00000518638 PLXNB2O15031 1838 aa7.57□□□□□ -1.2
CCDC6-203ENST00000518638 GRM8O00222 908 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms