RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 TGS1Q96RS0 853 aaKnown RBP4.25□□□□□ -1.73
CPNE3-204ENST00000517862 SRPK1Q96SB4 655 aaKnown RBP4.25□□□□□ -1.73
CPNE3-204ENST00000517862 CDK5RAP2Q96SN8 1893 aa4.25□□□□□ -1.73
CPNE3-204ENST00000517862 SLC9A7Q96T83 725 aa4.25□□□□□ -1.73
CPNE3-204ENST00000517862 NOC4LQ9BVI4 516 aaKnown RBP4.25□□□□□ -1.73
CPNE3-204ENST00000517862 PHF7Q9BWX1 381 aaPredicted RBP4.25□□□□□ -1.73
CPNE3-204ENST00000517862 FZD8Q9H461 694 aa4.25□□□□□ -1.73
CPNE3-204ENST00000517862 LIN7BQ9HAP6 207 aa4.25□□□□□ -1.73
CPNE3-204ENST00000517862 SLC6A14Q9UN76 642 aa4.25□□□□□ -1.73
CPNE3-204ENST00000517862 SLC45A1Q9Y2W3 748 aa4.25□□□□□ -1.73
CPNE3-204ENST00000517862 PCDHAC2Q9Y5I4 1007 aa4.25□□□□□ -1.73
CPNE3-204ENST00000517862 NUP98P52948 1817 aa4.25□□□□□ -1.73
CPNE3-204ENST00000517862 COL11A1P12107 1806 aaPredicted RBP4.24□□□□□ -1.73
CPNE3-204ENST00000517862 A0A1W2PQ45 241 aaPredicted RBP4.24□□□□□ -1.73
CPNE3-204ENST00000517862 A0A1W2PQY0 241 aa4.24□□□□□ -1.73
CPNE3-204ENST00000517862 UFL1O94874 794 aa4.24□□□□□ -1.73
CPNE3-204ENST00000517862 PF4P02776 101 aa4.24□□□□□ -1.73
CPNE3-204ENST00000517862 GPTP24298 496 aa4.24□□□□□ -1.73
CPNE3-204ENST00000517862 CRKP46108 304 aa4.24□□□□□ -1.73
CPNE3-204ENST00000517862 LIG3P49916 1009 aa4.24□□□□□ -1.73
CPNE3-204ENST00000517862 ERVK-21P61565 698 aa4.24□□□□□ -1.73
CPNE3-204ENST00000517862 MESP2Q0VG99 397 aa4.24□□□□□ -1.73
CPNE3-204ENST00000517862 TNFAIP1Q13829 316 aa4.24□□□□□ -1.73
CPNE3-204ENST00000517862 NFE2L2Q16236 605 aa4.24□□□□□ -1.73
CPNE3-204ENST00000517862 AMOTQ4VCS5 1084 aa4.24□□□□□ -1.73
CPNE3-204ENST00000517862 SNAP47Q5SQN1 464 aa4.24□□□□□ -1.73
CPNE3-204ENST00000517862 SUSD4Q5VX71 490 aa4.24□□□□□ -1.73
CPNE3-204ENST00000517862 WFDC8Q8IUA0 241 aa4.24□□□□□ -1.73
CPNE3-204ENST00000517862 RELL1Q8IUW5 271 aa4.24□□□□□ -1.73
CPNE3-204ENST00000517862 PHC3Q8NDX5 983 aa4.24□□□□□ -1.73
CPNE3-204ENST00000517862 GIMAP7Q8NHV1 300 aa4.24□□□□□ -1.73
CPNE3-204ENST00000517862 PHOSPHO2Q8TCD6 241 aa4.24□□□□□ -1.73
CPNE3-204ENST00000517862 ATRIPQ8WXE1 791 aa4.24□□□□□ -1.73
CPNE3-204ENST00000517862 NEK1Q96PY6 1258 aa4.24□□□□□ -1.73
CPNE3-204ENST00000517862 PPP1R16BQ96T49 567 aa4.24□□□□□ -1.73
CPNE3-204ENST00000517862 TCF12Q99081 682 aa4.24□□□□□ -1.73
CPNE3-204ENST00000517862 APBA2Q99767 749 aa4.24□□□□□ -1.73
CPNE3-204ENST00000517862 ZKSCAN3Q9BRR0 538 aa4.24□□□□□ -1.73
CPNE3-204ENST00000517862 RSRP1Q9BUV0 290 aa4.24□□□□□ -1.73
CPNE3-204ENST00000517862 TRIM55Q9BYV6 548 aa4.24□□□□□ -1.73
CPNE3-204ENST00000517862 NSUN3Q9H649 340 aaKnown RBP4.24□□□□□ -1.73
CPNE3-204ENST00000517862 CWC22Q9HCG8 908 aaKnown RBP4.24□□□□□ -1.73
CPNE3-204ENST00000517862 INCENPQ9NQS7 918 aa4.24□□□□□ -1.73
CPNE3-204ENST00000517862 SNTG2Q9NY99 539 aa4.24□□□□□ -1.73
CPNE3-204ENST00000517862 ZFATQ9P243 1243 aa4.24□□□□□ -1.73
CPNE3-204ENST00000517862 SALL4Q9UJQ4 1053 aa4.24□□□□□ -1.73
CPNE3-204ENST00000517862 SORCS3Q9UPU3 1222 aa4.24□□□□□ -1.73
CPNE3-204ENST00000517862 NEUROG3Q9Y4Z2 214 aa4.24□□□□□ -1.73
CPNE3-204ENST00000517862 IBTKQ9P2D0 1353 aaPredicted RBP4.24□□□□□ -1.73
CPNE3-204ENST00000517862 CENPEQ02224 2701 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 MAST3O60307 1309 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 MROH7Q68CQ1 1323 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 BOD1L1Q8NFC6 3051 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 SPTBN1Q01082 2364 aaKnown RBP4.23□□□□□ -1.73
CPNE3-204ENST00000517862 TMEM238LA0A1B0GVL6 79 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 FAM221BA6H8Z2 402 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 WDR64B1ANS9 1081 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 CXCL11O14625 94 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 TLR3O15455 904 aaKnown RBP4.23□□□□□ -1.73
CPNE3-204ENST00000517862 SLC28A2O43868 658 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 TBX10O75333 385 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 PAGE1O75459 146 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 TSPAN15O95858 294 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 RARAP10276 462 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 EDN3P14138 238 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 GARTP22102 1010 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 GRIA4P48058 902 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 NOVA1P51513 510 aaKnown RBP4.23□□□□□ -1.73
CPNE3-204ENST00000517862 CCL23P55773 120 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 MSMPQ1L6U9 139 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 SPRED3Q2MJR0 410 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 GOLM1Q8NBJ4 401 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 TRPV1Q8NER1 839 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 CPLX3Q8WVH0 158 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 UTP4Q969X6 686 aaKnown RBP4.23□□□□□ -1.73
CPNE3-204ENST00000517862 SEC16BQ96JE7 1060 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 TEPSINQ96N21 525 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 SGPP1Q9BX95 441 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 TMEM39BQ9GZU3 492 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 EPC1Q9H2F5 836 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 KANSL2Q9H9L4 492 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 STARD7Q9NQZ5 370 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 SEMA4GQ9NTN9 838 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 IL17BQ9UHF5 180 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 PPT2Q9UMR5 302 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 LEMD3Q9Y2U8 911 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 MSRB2Q9Y3D2 182 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 TSC2P49815 1807 aa4.23□□□□□ -1.73
CPNE3-204ENST00000517862 UBN2Q6ZU65 1347 aa4.22□□□□□ -1.73
CPNE3-204ENST00000517862 ANKHD1Q8IWZ3 2542 aaKnown RBP4.22□□□□□ -1.73
CPNE3-204ENST00000517862 BLACEA4D250 179 aa4.22□□□□□ -1.73
CPNE3-204ENST00000517862 ENC1O14682 589 aa4.22□□□□□ -1.73
CPNE3-204ENST00000517862 SMAD7O15105 426 aaKnown RBP4.22□□□□□ -1.73
CPNE3-204ENST00000517862 KLF4O43474 513 aa4.22□□□□□ -1.73
CPNE3-204ENST00000517862 TBC1D4O60343 1298 aa4.22□□□□□ -1.73
CPNE3-204ENST00000517862 RAB11FIP3O75154 756 aa4.22□□□□□ -1.73
CPNE3-204ENST00000517862 NTSR2O95665 410 aa4.22□□□□□ -1.73
CPNE3-204ENST00000517862 EYA4O95677 639 aa4.22□□□□□ -1.73
CPNE3-204ENST00000517862 CAPNS1P04632 268 aa4.22□□□□□ -1.73
CPNE3-204ENST00000517862 NFKB1P19838 968 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms