RNA–Protein interactions for RNA: ENST00000517857.1

TOP1MT-203, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 2

Gene TOP1MT, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-203ENST00000517857 TSHZ1Q6ZSZ6 1077 aa16.27■□□□□ 0.2
TOP1MT-203ENST00000517857 SNX29Q8TEQ0 813 aa16.27■□□□□ 0.2
TOP1MT-203ENST00000517857 FOXD4L4Q8WXT5 416 aaPredicted RBP16.27■□□□□ 0.2
TOP1MT-203ENST00000517857 APBB2Q92870 758 aa16.27■□□□□ 0.2
TOP1MT-203ENST00000517857 SLC9A7Q96T83 725 aa16.27■□□□□ 0.2
TOP1MT-203ENST00000517857 OSBPL7Q9BZF2 842 aa16.27■□□□□ 0.2
TOP1MT-203ENST00000517857 PPME1Q9Y570 386 aa16.27■□□□□ 0.2
TOP1MT-203ENST00000517857 RANBP2P49792 3224 aaKnown RBP16.27■□□□□ 0.19
TOP1MT-203ENST00000517857 ABHD14A-ACY1A0A1B0GW23 586 aa16.26■□□□□ 0.19
TOP1MT-203ENST00000517857 VWA3AA6NCI4 1184 aa16.26■□□□□ 0.19
TOP1MT-203ENST00000517857 GRXCR1A8MXD5 290 aa16.26■□□□□ 0.19
TOP1MT-203ENST00000517857 ZBTB39O15060 712 aa16.26■□□□□ 0.19
TOP1MT-203ENST00000517857 MAFO75444 373 aaPredicted RBP16.26■□□□□ 0.19
TOP1MT-203ENST00000517857 LYPLA2O95372 231 aa16.26■□□□□ 0.19
TOP1MT-203ENST00000517857 RFC5P40937 340 aa16.26■□□□□ 0.19
TOP1MT-203ENST00000517857 WDR5P61964 334 aaKnown RBP16.26■□□□□ 0.19
TOP1MT-203ENST00000517857 SMAD3P84022 425 aaKnown RBP16.26■□□□□ 0.19
TOP1MT-203ENST00000517857 PAK2Q13177 524 aa16.26■□□□□ 0.19
TOP1MT-203ENST00000517857 SF3A1Q15459 793 aaKnown RBP16.26■□□□□ 0.19
TOP1MT-203ENST00000517857 FAM173BQ6P4H8 233 aa16.26■□□□□ 0.19
TOP1MT-203ENST00000517857 POTEGQ6S5H5 508 aa16.26■□□□□ 0.19
TOP1MT-203ENST00000517857 CATSPER3Q86XQ3 398 aa16.26■□□□□ 0.19
TOP1MT-203ENST00000517857 EXOC8Q8IYI6 725 aa16.26■□□□□ 0.19
TOP1MT-203ENST00000517857 LINC01465Q8N7H1 131 aa16.26■□□□□ 0.19
TOP1MT-203ENST00000517857 ZNF579Q8NAF0 562 aaKnown RBP16.26■□□□□ 0.19
TOP1MT-203ENST00000517857 PIGOQ8TEQ8 1089 aa16.26■□□□□ 0.19
TOP1MT-203ENST00000517857 ZNF668Q96K58 619 aaPredicted RBP16.26■□□□□ 0.19
TOP1MT-203ENST00000517857 OSMRQ99650 979 aa16.26■□□□□ 0.19
TOP1MT-203ENST00000517857 POLR3CQ9BUI4 534 aaPredicted RBP16.26■□□□□ 0.19
TOP1MT-203ENST00000517857 ZSCAN16Q9H4T2 348 aaPredicted RBP16.26■□□□□ 0.19
TOP1MT-203ENST00000517857 STK24Q9Y6E0 443 aa16.26■□□□□ 0.19
TOP1MT-203ENST00000517857 KDM3AQ9Y4C1 1321 aa16.25■□□□□ 0.19
TOP1MT-203ENST00000517857 A0A087WWV3 80 aa16.25■□□□□ 0.19
TOP1MT-203ENST00000517857 PP2D1A8MPX8 630 aa16.25■□□□□ 0.19
TOP1MT-203ENST00000517857 SPATA31C1P0DKV0 1188 aa16.25■□□□□ 0.19
TOP1MT-203ENST00000517857 RPA1P27694 616 aa16.25■□□□□ 0.19
TOP1MT-203ENST00000517857 CD52P31358 61 aa16.25■□□□□ 0.19
TOP1MT-203ENST00000517857 NLRP11P59045 1033 aaKnown RBP16.25■□□□□ 0.19
TOP1MT-203ENST00000517857 DRP2Q13474 957 aa16.25■□□□□ 0.19
TOP1MT-203ENST00000517857 PDIA5Q14554 519 aa16.25■□□□□ 0.19
TOP1MT-203ENST00000517857 EMC2Q15006 297 aa16.25■□□□□ 0.19
TOP1MT-203ENST00000517857 ZRSR1Q15695 479 aaKnown RBP16.25■□□□□ 0.19
TOP1MT-203ENST00000517857 KRT79Q5XKE5 535 aa16.25■□□□□ 0.19
TOP1MT-203ENST00000517857 ARL6IP4Q66PJ3 421 aaKnown RBP16.25■□□□□ 0.19
TOP1MT-203ENST00000517857 IGSF22Q8N9C0 903 aa16.25■□□□□ 0.19
TOP1MT-203ENST00000517857 USP38Q8NB14 1042 aa16.25■□□□□ 0.19
TOP1MT-203ENST00000517857 NLRP7Q8WX94 980 aa16.25■□□□□ 0.19
TOP1MT-203ENST00000517857 CEP89Q96ST8 783 aa16.25■□□□□ 0.19
TOP1MT-203ENST00000517857 MTRQ99707 1265 aa16.25■□□□□ 0.19
TOP1MT-203ENST00000517857 ANKEF1Q9NU02 776 aa16.25■□□□□ 0.19
TOP1MT-203ENST00000517857 SUCLA2Q9P2R7 463 aaPredicted RBP16.25■□□□□ 0.19
TOP1MT-203ENST00000517857 USO1O60763 962 aaKnown RBP16.24■□□□□ 0.19
TOP1MT-203ENST00000517857 RPS6KA5O75582 802 aa16.24■□□□□ 0.19
TOP1MT-203ENST00000517857 AMHP03971 560 aa16.24■□□□□ 0.19
TOP1MT-203ENST00000517857 GPC3P51654 580 aa16.24■□□□□ 0.19
TOP1MT-203ENST00000517857 CRYBB1P53674 252 aaPredicted RBP16.24■□□□□ 0.19
TOP1MT-203ENST00000517857 DEFB103AP81534 67 aa16.24■□□□□ 0.19
TOP1MT-203ENST00000517857 CEBPZQ03701 1054 aaKnown RBP16.24■□□□□ 0.19
TOP1MT-203ENST00000517857 NFX1Q12986 1120 aaKnown RBP16.24■□□□□ 0.19
TOP1MT-203ENST00000517857 RAB30Q15771 203 aa16.24■□□□□ 0.19
TOP1MT-203ENST00000517857 IL17AQ16552 155 aa16.24■□□□□ 0.19
TOP1MT-203ENST00000517857 RHPN2Q8IUC4 686 aa16.24■□□□□ 0.19
TOP1MT-203ENST00000517857 MYOCDQ8IZQ8 938 aa16.24■□□□□ 0.19
TOP1MT-203ENST00000517857 NACC1Q96RE7 527 aa16.24■□□□□ 0.19
TOP1MT-203ENST00000517857 DHX33Q9H6R0 707 aaKnown RBP16.24■□□□□ 0.19
TOP1MT-203ENST00000517857 AGO3Q9H9G7 860 aaKnown RBP16.24■□□□□ 0.19
TOP1MT-203ENST00000517857 CDHR5Q9HBB8 845 aa16.24■□□□□ 0.19
TOP1MT-203ENST00000517857 ATP6V0A4Q9HBG4 840 aa16.24■□□□□ 0.19
TOP1MT-203ENST00000517857 MSRAQ9UJ68 235 aa16.24■□□□□ 0.19
TOP1MT-203ENST00000517857 CLIC4Q9Y696 253 aa16.24■□□□□ 0.19
TOP1MT-203ENST00000517857 SQORQ9Y6N5 450 aa16.24■□□□□ 0.19
TOP1MT-203ENST00000517857 IGKV6-21A0A0C4DH24 114 aa16.23■□□□□ 0.19
TOP1MT-203ENST00000517857 ARHGEF35A5YM69 484 aa16.23■□□□□ 0.19
TOP1MT-203ENST00000517857 GAS2O43903 313 aaKnown RBP16.23■□□□□ 0.19
TOP1MT-203ENST00000517857 GPR32O75388 356 aa16.23■□□□□ 0.19
TOP1MT-203ENST00000517857 PDIA4P13667 645 aaKnown RBP16.23■□□□□ 0.19
TOP1MT-203ENST00000517857 DNAJB2P25686 324 aa16.23■□□□□ 0.19
TOP1MT-203ENST00000517857 PBX2P40425 430 aa16.23■□□□□ 0.19
TOP1MT-203ENST00000517857 RARRES1P49788 294 aa16.23■□□□□ 0.19
TOP1MT-203ENST00000517857 RABGGTBP53611 331 aa16.23■□□□□ 0.19
TOP1MT-203ENST00000517857 MKRN4PQ13434 485 aaPredicted RBP16.23■□□□□ 0.19
TOP1MT-203ENST00000517857 ODR4Q5SWX8 454 aa16.23■□□□□ 0.19
TOP1MT-203ENST00000517857 ZNF697Q5TEC3 545 aa16.23■□□□□ 0.19
TOP1MT-203ENST00000517857 FAM117BQ6P1L5 589 aa16.23■□□□□ 0.19
TOP1MT-203ENST00000517857 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.23■□□□□ 0.19
TOP1MT-203ENST00000517857 ZNF710Q8N1W2 664 aa16.23■□□□□ 0.19
TOP1MT-203ENST00000517857 TMEM40Q8WWA1 233 aa16.23■□□□□ 0.19
TOP1MT-203ENST00000517857 TCP11Q8WWU5 503 aa16.23■□□□□ 0.19
TOP1MT-203ENST00000517857 PSPC1Q8WXF1 523 aaKnown RBP16.23■□□□□ 0.19
TOP1MT-203ENST00000517857 TMEM143Q96AN5 459 aa16.23■□□□□ 0.19
TOP1MT-203ENST00000517857 CDK5RAP3Q96JB5 506 aa16.23■□□□□ 0.19
TOP1MT-203ENST00000517857 NLRP4Q96MN2 994 aa16.23■□□□□ 0.19
TOP1MT-203ENST00000517857 ZBED2Q9BTP6 218 aa16.23■□□□□ 0.19
TOP1MT-203ENST00000517857 PBX4Q9BYU1 374 aa16.23■□□□□ 0.19
TOP1MT-203ENST00000517857 DDX19AQ9NUU7 478 aaKnown RBP16.23■□□□□ 0.19
TOP1MT-203ENST00000517857 PADI3Q9ULW8 664 aa16.23■□□□□ 0.19
TOP1MT-203ENST00000517857 KIAA1024Q9UPX6 916 aa16.23■□□□□ 0.19
TOP1MT-203ENST00000517857 NOC2LQ9Y3T9 749 aaKnown RBP16.23■□□□□ 0.19
TOP1MT-203ENST00000517857 DGAT1O75907 488 aa16.22■□□□□ 0.19
TOP1MT-203ENST00000517857 ZSCAN22P10073 491 aaPredicted RBP16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms