RNA–Protein interactions for RNA: ENST00000517838.5

PVT1-206, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 518 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-206ENST00000517838 HSDL1Q3SXM5 330 aa8.4□□□□□ -1.06
PVT1-206ENST00000517838 CELF3Q5SZQ8 465 aaKnown RBP8.4□□□□□ -1.06
PVT1-206ENST00000517838 ATL3Q6DD88 541 aa8.4□□□□□ -1.06
PVT1-206ENST00000517838 PPP1R18Q6NYC8 613 aa8.4□□□□□ -1.06
PVT1-206ENST00000517838 FIBCD1Q8N539 461 aa8.4□□□□□ -1.06
PVT1-206ENST00000517838 SEPT8Q92599 483 aa8.4□□□□□ -1.06
PVT1-206ENST00000517838 ATP6V0A1Q93050 837 aa8.4□□□□□ -1.06
PVT1-206ENST00000517838 POP1Q99575 1024 aaKnown RBP8.4□□□□□ -1.06
PVT1-206ENST00000517838 ZKSCAN3Q9BRR0 538 aa8.4□□□□□ -1.06
PVT1-206ENST00000517838 MYL10Q9BUA6 226 aa8.4□□□□□ -1.06
PVT1-206ENST00000517838 SLC26A6Q9BXS9 759 aa8.4□□□□□ -1.06
PVT1-206ENST00000517838 MAF1Q9H063 256 aa8.4□□□□□ -1.06
PVT1-206ENST00000517838 LY9Q9HBG7 655 aa8.4□□□□□ -1.06
PVT1-206ENST00000517838 PTPRSQ13332 1948 aa8.4□□□□□ -1.06
PVT1-206ENST00000517838 TANC1Q9C0D5 1861 aa8.39□□□□□ -1.07
PVT1-206ENST00000517838 ABCB11O95342 1321 aa8.39□□□□□ -1.07
PVT1-206ENST00000517838 CCDC196A0A1B0GTZ2 297 aa8.39□□□□□ -1.07
PVT1-206ENST00000517838 C17orf102A2RUQ5 167 aa8.39□□□□□ -1.07
PVT1-206ENST00000517838 EYA4O95677 639 aa8.39□□□□□ -1.07
PVT1-206ENST00000517838 RB1P06400 928 aa8.39□□□□□ -1.07
PVT1-206ENST00000517838 CTSHP09668 335 aa8.39□□□□□ -1.07
PVT1-206ENST00000517838 CCDC192P0DO97 292 aa8.39□□□□□ -1.07
PVT1-206ENST00000517838 CTNNB1P35222 781 aa8.39□□□□□ -1.07
PVT1-206ENST00000517838 EVCP57679 992 aa8.39□□□□□ -1.07
PVT1-206ENST00000517838 USP46P62068 366 aa8.39□□□□□ -1.07
PVT1-206ENST00000517838 ZXDAP98168 799 aa8.39□□□□□ -1.07
PVT1-206ENST00000517838 ARHGEF16Q5VV41 709 aa8.39□□□□□ -1.07
PVT1-206ENST00000517838 BRAPQ7Z569 592 aa8.39□□□□□ -1.07
PVT1-206ENST00000517838 IQCA1Q86XH1 822 aa8.39□□□□□ -1.07
PVT1-206ENST00000517838 MCF2L2Q86YR7 1114 aa8.39□□□□□ -1.07
PVT1-206ENST00000517838 FBXL6Q8N531 539 aa8.39□□□□□ -1.07
PVT1-206ENST00000517838 THAP11Q96EK4 314 aa8.39□□□□□ -1.07
PVT1-206ENST00000517838 MSLNLQ96KJ4 702 aa8.39□□□□□ -1.07
PVT1-206ENST00000517838 LMAN2LQ9H0V9 348 aa8.39□□□□□ -1.07
PVT1-206ENST00000517838 RNPEPQ9H4A4 650 aa8.39□□□□□ -1.07
PVT1-206ENST00000517838 IGFLR1Q9H665 355 aa8.39□□□□□ -1.07
PVT1-206ENST00000517838 BCAS3Q9H6U6 928 aa8.39□□□□□ -1.07
PVT1-206ENST00000517838 PXMP2Q9NR77 195 aa8.39□□□□□ -1.07
PVT1-206ENST00000517838 FAM86C1Q9NVL1 165 aa8.39□□□□□ -1.07
PVT1-206ENST00000517838 CLEC1BQ9P126 229 aa8.39□□□□□ -1.07
PVT1-206ENST00000517838 CD207Q9UJ71 328 aa8.39□□□□□ -1.07
PVT1-206ENST00000517838 SLC27A5Q9Y2P5 690 aa8.39□□□□□ -1.07
PVT1-206ENST00000517838 MYH15Q9Y2K3 1946 aa8.39□□□□□ -1.07
PVT1-206ENST00000517838 ZNF318Q5VUA4 2279 aa8.38□□□□□ -1.07
PVT1-206ENST00000517838 LOC730098B7Z3J9 87 aa8.38□□□□□ -1.07
PVT1-206ENST00000517838 H3BRB1 525 aa8.38□□□□□ -1.07
PVT1-206ENST00000517838 OPLAHO14841 1288 aa8.38□□□□□ -1.07
PVT1-206ENST00000517838 HOXA2O43364 376 aa8.38□□□□□ -1.07
PVT1-206ENST00000517838 GFRA3O60609 400 aa8.38□□□□□ -1.07
PVT1-206ENST00000517838 KINO60870 393 aaKnown RBP8.38□□□□□ -1.07
PVT1-206ENST00000517838 GGPS1O95749 300 aa8.38□□□□□ -1.07
PVT1-206ENST00000517838 ADH1BP00325 375 aa8.38□□□□□ -1.07
PVT1-206ENST00000517838 SMIM10L2AP0DMW4 78 aa8.38□□□□□ -1.07
PVT1-206ENST00000517838 SMIM10L2BP0DMW5 78 aa8.38□□□□□ -1.07
PVT1-206ENST00000517838 LIG1P18858 919 aa8.38□□□□□ -1.07
PVT1-206ENST00000517838 LIFRP42702 1097 aa8.38□□□□□ -1.07
PVT1-206ENST00000517838 ZRSR1Q15695 479 aaKnown RBP8.38□□□□□ -1.07
PVT1-206ENST00000517838 PKN1Q16512 942 aa8.38□□□□□ -1.07
PVT1-206ENST00000517838 CDC37Q16543 378 aaPredicted RBP8.38□□□□□ -1.07
PVT1-206ENST00000517838 QRICH1Q2TAL8 776 aa8.38□□□□□ -1.07
PVT1-206ENST00000517838 GPATCH4Q5T3I0 446 aaKnown RBP8.38□□□□□ -1.07
PVT1-206ENST00000517838 SASS6Q6UVJ0 657 aa8.38□□□□□ -1.07
PVT1-206ENST00000517838 CATIPQ7Z7H3 387 aa8.38□□□□□ -1.07
PVT1-206ENST00000517838 VSIG10LQ86VR7 867 aa8.38□□□□□ -1.07
PVT1-206ENST00000517838 SUGP1Q8IWZ8 645 aaKnown RBP8.38□□□□□ -1.07
PVT1-206ENST00000517838 ADGRF4Q8IZF3 695 aa8.38□□□□□ -1.07
PVT1-206ENST00000517838 ZNF654Q8IZM8 581 aa8.38□□□□□ -1.07
PVT1-206ENST00000517838 TMTC2Q8N394 836 aa8.38□□□□□ -1.07
PVT1-206ENST00000517838 FSIP1Q8NA03 581 aa8.38□□□□□ -1.07
PVT1-206ENST00000517838 CLP1Q92989 425 aaKnown RBP8.38□□□□□ -1.07
PVT1-206ENST00000517838 PHKBQ93100 1093 aa8.38□□□□□ -1.07
PVT1-206ENST00000517838 SPATA33Q96N06 139 aa8.38□□□□□ -1.07
PVT1-206ENST00000517838 PRRX2Q99811 253 aa8.38□□□□□ -1.07
PVT1-206ENST00000517838 C11orf84Q9BUA3 381 aaPredicted RBP8.38□□□□□ -1.07
PVT1-206ENST00000517838 CLSTN2Q9H4D0 955 aa8.38□□□□□ -1.07
PVT1-206ENST00000517838 TUT1Q9H6E5 874 aaKnown RBP8.38□□□□□ -1.07
PVT1-206ENST00000517838 RC3H2Q9HBD1 1191 aaKnown RBP8.38□□□□□ -1.07
PVT1-206ENST00000517838 SETD4Q9NVD3 440 aa8.38□□□□□ -1.07
PVT1-206ENST00000517838 DACT1Q9NYF0 836 aa8.38□□□□□ -1.07
PVT1-206ENST00000517838 ZSWIM5Q9P217 1185 aa8.38□□□□□ -1.07
PVT1-206ENST00000517838 PLAGL2Q9UPG8 496 aa8.38□□□□□ -1.07
PVT1-206ENST00000517838 MYH4Q9Y623 1939 aa8.38□□□□□ -1.07
PVT1-206ENST00000517838 TCHHQ07283 1943 aa8.37□□□□□ -1.07
PVT1-206ENST00000517838 STK36Q9NRP7 1315 aa8.37□□□□□ -1.07
PVT1-206ENST00000517838 ENPP3O14638 875 aa8.37□□□□□ -1.07
PVT1-206ENST00000517838 CAND2O75155 1236 aa8.37□□□□□ -1.07
PVT1-206ENST00000517838 CSPG5O95196 566 aa8.37□□□□□ -1.07
PVT1-206ENST00000517838 CFBP00751 764 aa8.37□□□□□ -1.07
PVT1-206ENST00000517838 MMP1P03956 469 aa8.37□□□□□ -1.07
PVT1-206ENST00000517838 PCP11498 1178 aaKnown RBP8.37□□□□□ -1.07
PVT1-206ENST00000517838 MYCLP12524 364 aaPredicted RBP8.37□□□□□ -1.07
PVT1-206ENST00000517838 XBP1P17861 261 aa8.37□□□□□ -1.07
PVT1-206ENST00000517838 UBA1P22314 1058 aaKnown RBP8.37□□□□□ -1.07
PVT1-206ENST00000517838 DNAJB1P25685 340 aa8.37□□□□□ -1.07
PVT1-206ENST00000517838 ADD1P35611 737 aaKnown RBP8.37□□□□□ -1.07
PVT1-206ENST00000517838 HSD17B4P51659 736 aa8.37□□□□□ -1.07
PVT1-206ENST00000517838 VCPP55072 806 aaKnown RBP8.37□□□□□ -1.07
PVT1-206ENST00000517838 ADAM17P78536 824 aa8.37□□□□□ -1.07
PVT1-206ENST00000517838 CBX2Q14781 532 aaPredicted RBP8.37□□□□□ -1.07
PVT1-206ENST00000517838 CAMK4Q16566 473 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms