RNA–Protein interactions for RNA: ENST00000517730.5

PCM1-204, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-204ENST00000517730 GALNTL6Q49A17 601 aa16.49■□□□□ 0.23
PCM1-204ENST00000517730 HERC4Q5GLZ8 1057 aaPredicted RBP16.49■□□□□ 0.23
PCM1-204ENST00000517730 NAIF1Q69YI7 327 aaPredicted RBP16.49■□□□□ 0.23
PCM1-204ENST00000517730 DZIP1Q86YF9 867 aaKnown RBP16.49■□□□□ 0.23
PCM1-204ENST00000517730 RBM46Q8TBY0 533 aaKnown RBP16.49■□□□□ 0.23
PCM1-204ENST00000517730 CNKSR1Q969H4 720 aa16.49■□□□□ 0.23
PCM1-204ENST00000517730 FGFBP2Q9BYJ0 223 aa16.49■□□□□ 0.23
PCM1-204ENST00000517730 AGAP1Q9UPQ3 857 aa16.49■□□□□ 0.23
PCM1-204ENST00000517730 L3MBTL1Q9Y468 752 aa16.49■□□□□ 0.23
PCM1-204ENST00000517730 USP15Q9Y4E8 981 aaPredicted RBP16.49■□□□□ 0.23
PCM1-204ENST00000517730 UBOX5O94941 541 aa16.49■□□□□ 0.23
PCM1-204ENST00000517730 OAS1P00973 400 aaKnown RBP16.49■□□□□ 0.23
PCM1-204ENST00000517730 GCKP35557 465 aa16.49■□□□□ 0.23
PCM1-204ENST00000517730 JAM2P57087 298 aa16.49■□□□□ 0.23
PCM1-204ENST00000517730 ECM1Q16610 540 aa16.49■□□□□ 0.23
PCM1-204ENST00000517730 INTS5Q6P9B9 1019 aaKnown RBP16.49■□□□□ 0.23
PCM1-204ENST00000517730 ANKRD27Q96NW4 1050 aa16.49■□□□□ 0.23
PCM1-204ENST00000517730 ABCF3Q9NUQ8 709 aa16.49■□□□□ 0.23
PCM1-204ENST00000517730 MTRF1LQ9UGC7 380 aaKnown RBP16.49■□□□□ 0.23
PCM1-204ENST00000517730 DDX3XO00571 662 aaKnown RBP eCLIP16.48■□□□□ 0.235e-15■■□□□ 13.9
PCM1-204ENST00000517730 KIAA0391O15091 583 aaKnown RBP16.48■□□□□ 0.23
PCM1-204ENST00000517730 DDX3YO15523 660 aaKnown RBP16.48■□□□□ 0.23
PCM1-204ENST00000517730 RASA1P20936 1047 aa16.48■□□□□ 0.23
PCM1-204ENST00000517730 PLTPP55058 493 aa16.48■□□□□ 0.23
PCM1-204ENST00000517730 IFI35P80217 286 aaPredicted RBP16.48■□□□□ 0.23
PCM1-204ENST00000517730 SLC29A2Q14542 456 aa16.48■□□□□ 0.23
PCM1-204ENST00000517730 TNFAIP8L3Q5GJ75 292 aa16.48■□□□□ 0.23
PCM1-204ENST00000517730 JAMLQ86YT9 394 aa16.48■□□□□ 0.23
PCM1-204ENST00000517730 U2AF1L4Q8WU68 220 aaKnown RBP16.48■□□□□ 0.23
PCM1-204ENST00000517730 RFFLQ8WZ73 363 aa16.48■□□□□ 0.23
PCM1-204ENST00000517730 SPDL1Q96EA4 605 aa16.48■□□□□ 0.23
PCM1-204ENST00000517730 ACSBG1Q96GR2 724 aa16.48■□□□□ 0.23
PCM1-204ENST00000517730 ECT2Q9H8V3 914 aa16.48■□□□□ 0.23
PCM1-204ENST00000517730 HOMER3Q9NSC5 361 aa16.48■□□□□ 0.23
PCM1-204ENST00000517730 TRAF3IP3Q9Y228 551 aa16.48■□□□□ 0.23
PCM1-204ENST00000517730 SUN1O94901 812 aa16.48■□□□□ 0.23
PCM1-204ENST00000517730 XRCC5P13010 732 aaKnown RBP16.48■□□□□ 0.23
PCM1-204ENST00000517730 HSPA6P17066 643 aa16.48■□□□□ 0.23
PCM1-204ENST00000517730 ALDH5A1P51649 535 aaPredicted RBP16.48■□□□□ 0.23
PCM1-204ENST00000517730 CCNHP51946 323 aaPredicted RBP16.48■□□□□ 0.23
PCM1-204ENST00000517730 GALCP54803 685 aa16.48■□□□□ 0.23
PCM1-204ENST00000517730 MAPK7Q13164 816 aa16.48■□□□□ 0.23
PCM1-204ENST00000517730 CNGA2Q16280 664 aa16.48■□□□□ 0.23
PCM1-204ENST00000517730 ZDHHC24Q6UX98 284 aa16.48■□□□□ 0.23
PCM1-204ENST00000517730 MXD3Q9BW11 206 aa16.48■□□□□ 0.23
PCM1-204ENST00000517730 PITPNM2Q9BZ72 1349 aa16.47■□□□□ 0.23
PCM1-204ENST00000517730 O00370 1275 aa16.47■□□□□ 0.23
PCM1-204ENST00000517730 EDIL3O43854 480 aa16.47■□□□□ 0.23
PCM1-204ENST00000517730 LUC7L3O95232 432 aaKnown RBP16.47■□□□□ 0.23
PCM1-204ENST00000517730 TMEM253P0C7T8 217 aa16.47■□□□□ 0.23
PCM1-204ENST00000517730 LMNB1P20700 586 aa16.47■□□□□ 0.23
PCM1-204ENST00000517730 COPS2P61201 443 aa16.47■□□□□ 0.23
PCM1-204ENST00000517730 KCNJ2P63252 427 aa16.47■□□□□ 0.23
PCM1-204ENST00000517730 BNIP1Q12981 228 aa16.47■□□□□ 0.23
PCM1-204ENST00000517730 EPHA7Q15375 998 aa16.47■□□□□ 0.23
PCM1-204ENST00000517730 KCTD19Q17RG1 926 aaPredicted RBP16.47■□□□□ 0.23
PCM1-204ENST00000517730 CDCA2Q69YH5 1023 aaPredicted RBP16.47■□□□□ 0.23
PCM1-204ENST00000517730 USP17L2Q6R6M4 530 aa16.47■□□□□ 0.23
PCM1-204ENST00000517730 RIOX1Q9H6W3 641 aa16.47■□□□□ 0.23
PCM1-204ENST00000517730 METTL14Q9HCE5 456 aaKnown RBP16.47■□□□□ 0.23
PCM1-204ENST00000517730 VAT1LQ9HCJ6 419 aa16.47■□□□□ 0.23
PCM1-204ENST00000517730 CORO1CQ9ULV4 474 aaPredicted RBP16.47■□□□□ 0.23
PCM1-204ENST00000517730 NR2E1Q9Y466 385 aa16.47■□□□□ 0.23
PCM1-204ENST00000517730 PODXLO00592 558 aa16.47■□□□□ 0.23
PCM1-204ENST00000517730 PLA2G4BP0C869 781 aa16.47■□□□□ 0.23
PCM1-204ENST00000517730 PPATQ06203 517 aa16.47■□□□□ 0.23
PCM1-204ENST00000517730 CAPRIN2Q6IMN6 1127 aaKnown RBP16.47■□□□□ 0.23
PCM1-204ENST00000517730 MFSD5Q6N075 450 aa16.47■□□□□ 0.23
PCM1-204ENST00000517730 GPBP1Q86WP2 473 aa16.47■□□□□ 0.23
PCM1-204ENST00000517730 KLHL29Q96CT2 875 aa16.47■□□□□ 0.23
PCM1-204ENST00000517730 ZNF570Q96NI8 536 aa16.47■□□□□ 0.23
PCM1-204ENST00000517730 SPATS2LQ9NUQ6 558 aaKnown RBP16.47■□□□□ 0.23
PCM1-204ENST00000517730 SLC5A4Q9NY91 659 aa16.47■□□□□ 0.23
PCM1-204ENST00000517730 RPTORQ8N122 1335 aa16.46■□□□□ 0.23
PCM1-204ENST00000517730 IGF2BP3O00425 579 aaKnown RBP eCLIP16.46■□□□□ 0.23
PCM1-204ENST00000517730 DIAPH2O60879 1101 aa16.46■□□□□ 0.23
PCM1-204ENST00000517730 SMNDC1O75940 238 aaKnown RBP eCLIP16.46■□□□□ 0.23
PCM1-204ENST00000517730 CCNG1P51959 295 aa16.46■□□□□ 0.23
PCM1-204ENST00000517730 PRPF4BQ13523 1007 aaKnown RBP16.46■□□□□ 0.23
PCM1-204ENST00000517730 PLS1Q14651 629 aa16.46■□□□□ 0.23
PCM1-204ENST00000517730 DCAF12L1Q5VU92 463 aa16.46■□□□□ 0.23
PCM1-204ENST00000517730 DNAAF5Q86Y56 855 aa16.46■□□□□ 0.23
PCM1-204ENST00000517730 FBXO25Q8TCJ0 367 aa16.46■□□□□ 0.23
PCM1-204ENST00000517730 RUNDC3BQ96NL0 473 aa16.46■□□□□ 0.23
PCM1-204ENST00000517730 ROPN1BQ9BZX4 212 aaPredicted RBP16.46■□□□□ 0.23
PCM1-204ENST00000517730 ROPN1Q9HAT0 212 aaPredicted RBP16.46■□□□□ 0.23
PCM1-204ENST00000517730 ARHGEF3Q9NR81 526 aa16.46■□□□□ 0.23
PCM1-204ENST00000517730 DDX25Q9UHL0 483 aaKnown RBP16.46■□□□□ 0.23
PCM1-204ENST00000517730 SNX24Q9Y343 169 aa16.46■□□□□ 0.23
PCM1-204ENST00000517730 GTPBP10A4D1E9 387 aaKnown RBP16.46■□□□□ 0.22
PCM1-204ENST00000517730 RASGRF2O14827 1237 aa16.46■□□□□ 0.22
PCM1-204ENST00000517730 MARCH6O60337 910 aa16.46■□□□□ 0.22
PCM1-204ENST00000517730 CHRNA3P32297 505 aa16.46■□□□□ 0.22
PCM1-204ENST00000517730 STAT1P42224 750 aa16.46■□□□□ 0.22
PCM1-204ENST00000517730 LACTBP83111 547 aaPredicted RBP16.46■□□□□ 0.22
PCM1-204ENST00000517730 NEDD1Q8NHV4 660 aa16.46■□□□□ 0.22
PCM1-204ENST00000517730 SLC30A5Q8TAD4 765 aa16.46■□□□□ 0.22
PCM1-204ENST00000517730 SLC35G2Q8TBE7 412 aa16.46■□□□□ 0.22
PCM1-204ENST00000517730 CTNNBL1Q8WYA6 563 aaPredicted RBP16.46■□□□□ 0.22
PCM1-204ENST00000517730 SAAL1Q96ER3 474 aa16.46■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms