RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 FAM189BP81408 668 aa13.07□□□□□ -0.32
TRAPPC9-203ENST00000517667 UBE2SQ16763 222 aa13.07□□□□□ -0.32
TRAPPC9-203ENST00000517667 ZNF484Q5JVG2 852 aa13.07□□□□□ -0.32
TRAPPC9-203ENST00000517667 KIAA0319LQ8IZA0 1049 aa13.07□□□□□ -0.32
TRAPPC9-203ENST00000517667 ZDHHC14Q8IZN3 488 aa13.07□□□□□ -0.32
TRAPPC9-203ENST00000517667 ABI1Q8IZP0 508 aa13.07□□□□□ -0.32
TRAPPC9-203ENST00000517667 PLCD3Q8N3E9 789 aa13.07□□□□□ -0.32
TRAPPC9-203ENST00000517667 TDRD5Q8NAT2 981 aaKnown RBP13.07□□□□□ -0.32
TRAPPC9-203ENST00000517667 IGDCC4Q8TDY8 1250 aa13.07□□□□□ -0.32
TRAPPC9-203ENST00000517667 RUFY2Q8WXA3 655 aa13.07□□□□□ -0.32
TRAPPC9-203ENST00000517667 MXRA8Q9BRK3 442 aa13.07□□□□□ -0.32
TRAPPC9-203ENST00000517667 DZANK1Q9NVP4 752 aa13.07□□□□□ -0.32
TRAPPC9-203ENST00000517667 USTQ9Y2C2 406 aa13.07□□□□□ -0.32
TRAPPC9-203ENST00000517667 DENND4AQ7Z401 1863 aa13.07□□□□□ -0.32
TRAPPC9-203ENST00000517667 IGKV6D-21A0A0A0MT36 114 aa13.06□□□□□ -0.32
TRAPPC9-203ENST00000517667 CALM1P0DP23 149 aa13.06□□□□□ -0.32
TRAPPC9-203ENST00000517667 CALM2P0DP24 149 aa13.06□□□□□ -0.32
TRAPPC9-203ENST00000517667 CALM3P0DP25 149 aa13.06□□□□□ -0.32
TRAPPC9-203ENST00000517667 ANTXR2P58335 489 aa13.06□□□□□ -0.32
TRAPPC9-203ENST00000517667 CASC1Q6TDU7 716 aa13.06□□□□□ -0.32
TRAPPC9-203ENST00000517667 FRMD5Q7Z6J6 570 aa13.06□□□□□ -0.32
TRAPPC9-203ENST00000517667 TMTC2Q8N394 836 aa13.06□□□□□ -0.32
TRAPPC9-203ENST00000517667 MRPL43Q8N983 215 aaKnown RBP13.06□□□□□ -0.32
TRAPPC9-203ENST00000517667 MYL10Q9BUA6 226 aa13.06□□□□□ -0.32
TRAPPC9-203ENST00000517667 LY9Q9HBG7 655 aa13.06□□□□□ -0.32
TRAPPC9-203ENST00000517667 SPG21Q9NZD8 308 aa13.06□□□□□ -0.32
TRAPPC9-203ENST00000517667 MYH9P35579 1960 aaKnown RBP13.06□□□□□ -0.32
TRAPPC9-203ENST00000517667 C2orf71A6NGG8 1288 aa13.05□□□□□ -0.32
TRAPPC9-203ENST00000517667 BACH1O14867 736 aa13.05□□□□□ -0.32
TRAPPC9-203ENST00000517667 PLEKHA8P1O95397 391 aa13.05□□□□□ -0.32
TRAPPC9-203ENST00000517667 ZSCAN20P17040 1043 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC9-203ENST00000517667 ITGB3BPQ13352 177 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC9-203ENST00000517667 KIZQ2M2Z5 673 aa13.05□□□□□ -0.32
TRAPPC9-203ENST00000517667 CEP55Q53EZ4 464 aa13.05□□□□□ -0.32
TRAPPC9-203ENST00000517667 KIAA1841Q6NSI8 718 aa13.05□□□□□ -0.32
TRAPPC9-203ENST00000517667 FAM228AQ86W67 206 aa13.05□□□□□ -0.32
TRAPPC9-203ENST00000517667 MB21D2Q8IYB1 491 aaPredicted RBP13.05□□□□□ -0.32
TRAPPC9-203ENST00000517667 ADSSL1Q8N142 457 aa13.05□□□□□ -0.32
TRAPPC9-203ENST00000517667 SRBD1Q8N5C6 995 aaKnown RBP13.05□□□□□ -0.32
TRAPPC9-203ENST00000517667 CASD1Q96PB1 797 aa13.05□□□□□ -0.32
TRAPPC9-203ENST00000517667 OSMRQ99650 979 aa13.05□□□□□ -0.32
TRAPPC9-203ENST00000517667 CDHR5Q9HBB8 845 aa13.05□□□□□ -0.32
TRAPPC9-203ENST00000517667 AGO4Q9HCK5 861 aaKnown RBP13.05□□□□□ -0.32
TRAPPC9-203ENST00000517667 DNAH14Q0VDD8 3507 aa13.04□□□□□ -0.32
TRAPPC9-203ENST00000517667 CARNS1A5YM72 827 aa13.04□□□□□ -0.32
TRAPPC9-203ENST00000517667 CCDC69A6NI79 296 aa13.04□□□□□ -0.32
TRAPPC9-203ENST00000517667 FOSP01100 380 aaPredicted RBP13.04□□□□□ -0.32
TRAPPC9-203ENST00000517667 GIT2Q14161 759 aa13.04□□□□□ -0.32
TRAPPC9-203ENST00000517667 DSC3Q14574 896 aa13.04□□□□□ -0.32
TRAPPC9-203ENST00000517667 ATAT1Q5SQI0 421 aa13.04□□□□□ -0.32
TRAPPC9-203ENST00000517667 ABHD15Q6UXT9 468 aa13.04□□□□□ -0.32
TRAPPC9-203ENST00000517667 NFXL1Q6ZNB6 911 aa13.04□□□□□ -0.32
TRAPPC9-203ENST00000517667 LRRC55Q6ZSA7 311 aa13.04□□□□□ -0.32
TRAPPC9-203ENST00000517667 HEATR3Q7Z4Q2 680 aa13.04□□□□□ -0.32
TRAPPC9-203ENST00000517667 ZNF710Q8N1W2 664 aa13.04□□□□□ -0.32
TRAPPC9-203ENST00000517667 CYP2W1Q8TAV3 490 aa13.04□□□□□ -0.32
TRAPPC9-203ENST00000517667 RSPH1Q8WYR4 309 aa13.04□□□□□ -0.32
TRAPPC9-203ENST00000517667 MRPL9Q9BYD2 267 aaKnown RBP13.04□□□□□ -0.32
TRAPPC9-203ENST00000517667 ZNF302Q9NR11 478 aa13.04□□□□□ -0.32
TRAPPC9-203ENST00000517667 CDH22Q9UJ99 828 aa13.04□□□□□ -0.32
TRAPPC9-203ENST00000517667 DBR1Q9UK59 544 aaKnown RBP13.04□□□□□ -0.32
TRAPPC9-203ENST00000517667 CLASP2O75122 1294 aaKnown RBP13.03□□□□□ -0.32
TRAPPC9-203ENST00000517667 GPR32O75388 356 aa13.03□□□□□ -0.32
TRAPPC9-203ENST00000517667 C22orf31O95567 290 aa13.03□□□□□ -0.32
TRAPPC9-203ENST00000517667 EOMESO95936 686 aa13.03□□□□□ -0.32
TRAPPC9-203ENST00000517667 ASGR2P07307 311 aa13.03□□□□□ -0.32
TRAPPC9-203ENST00000517667 ARP10275 920 aa13.03□□□□□ -0.32
TRAPPC9-203ENST00000517667 AOC1P19801 751 aa13.03□□□□□ -0.32
TRAPPC9-203ENST00000517667 CA8P35219 290 aa13.03□□□□□ -0.32
TRAPPC9-203ENST00000517667 PBX3P40426 434 aa13.03□□□□□ -0.32
TRAPPC9-203ENST00000517667 PTH1RQ03431 593 aa13.03□□□□□ -0.32
TRAPPC9-203ENST00000517667 RARS2Q5T160 578 aaKnown RBP13.03□□□□□ -0.32
TRAPPC9-203ENST00000517667 PPP1R18Q6NYC8 613 aa13.03□□□□□ -0.32
TRAPPC9-203ENST00000517667 MIS18BP1Q6P0N0 1132 aa13.03□□□□□ -0.32
TRAPPC9-203ENST00000517667 PDXDC2PQ6P474 469 aa13.03□□□□□ -0.32
TRAPPC9-203ENST00000517667 NIPA1Q7RTP0 329 aa13.03□□□□□ -0.32
TRAPPC9-203ENST00000517667 CCDC60Q8IWA6 550 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC9-203ENST00000517667 SLC39A11Q8N1S5 342 aa13.03□□□□□ -0.32
TRAPPC9-203ENST00000517667 TMEM87AQ8NBN3 555 aa13.03□□□□□ -0.32
TRAPPC9-203ENST00000517667 FLCNQ8NFG4 579 aa13.03□□□□□ -0.32
TRAPPC9-203ENST00000517667 BBXQ8WY36 941 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC9-203ENST00000517667 ACSF2Q96CM8 615 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC9-203ENST00000517667 TMEM169Q96HH4 297 aa13.03□□□□□ -0.32
TRAPPC9-203ENST00000517667 TMEM87BQ96K49 555 aa13.03□□□□□ -0.32
TRAPPC9-203ENST00000517667 SMOC2Q9H3U7 446 aa13.03□□□□□ -0.32
TRAPPC9-203ENST00000517667 CYP26B1Q9NR63 512 aa13.03□□□□□ -0.32
TRAPPC9-203ENST00000517667 LIMD1Q9UGP4 676 aa13.03□□□□□ -0.32
TRAPPC9-203ENST00000517667 CEP131Q9UPN4 1083 aa13.03□□□□□ -0.32
TRAPPC9-203ENST00000517667 ZBTB42B2RXF5 422 aa13.02□□□□□ -0.33
TRAPPC9-203ENST00000517667 MEIS1O00470 390 aa13.02□□□□□ -0.33
TRAPPC9-203ENST00000517667 CCNE2O96020 404 aa13.02□□□□□ -0.33
TRAPPC9-203ENST00000517667 MCM5P33992 734 aa13.02□□□□□ -0.33
TRAPPC9-203ENST00000517667 ALDH7A1P49419 539 aaKnown RBP13.02□□□□□ -0.33
TRAPPC9-203ENST00000517667 CWF19L1Q69YN2 538 aaKnown RBP13.02□□□□□ -0.33
TRAPPC9-203ENST00000517667 CKAP2LQ8IYA6 745 aa13.02□□□□□ -0.33
TRAPPC9-203ENST00000517667 CCDC105Q8IYK2 499 aa13.02□□□□□ -0.33
TRAPPC9-203ENST00000517667 CMTR1Q8N1G2 835 aaKnown RBP13.02□□□□□ -0.33
TRAPPC9-203ENST00000517667 METTL13Q8N6R0 699 aa13.02□□□□□ -0.33
TRAPPC9-203ENST00000517667 MAP7D2Q96T17 732 aa13.02□□□□□ -0.33
TRAPPC9-203ENST00000517667 PPP1R16BQ96T49 567 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms