RNA–Protein interactions for RNA: ENST00000517534.5

CTNNA1-203, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 416 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-203ENST00000517534 PKN1Q16512 942 aa9.49□□□□□ -0.89
CTNNA1-203ENST00000517534 PFKFB3Q16875 520 aaPredicted RBP9.49□□□□□ -0.89
CTNNA1-203ENST00000517534 CSPP1Q1MSJ5 1256 aa9.49□□□□□ -0.89
CTNNA1-203ENST00000517534 KIZQ2M2Z5 673 aa9.49□□□□□ -0.89
CTNNA1-203ENST00000517534 RNF20Q5VTR2 975 aa9.49□□□□□ -0.89
CTNNA1-203ENST00000517534 FAM160B1Q5W0V3 765 aa9.49□□□□□ -0.89
CTNNA1-203ENST00000517534 PDXDC2PQ6P474 469 aa9.49□□□□□ -0.89
CTNNA1-203ENST00000517534 SLC24A5Q71RS6 500 aa9.49□□□□□ -0.89
CTNNA1-203ENST00000517534 RBM23Q86U06 439 aaKnown RBP9.49□□□□□ -0.89
CTNNA1-203ENST00000517534 ALYREFQ86V81 257 aaKnown RBP9.49□□□□□ -0.89
CTNNA1-203ENST00000517534 FAM228AQ86W67 206 aa9.49□□□□□ -0.89
CTNNA1-203ENST00000517534 LINC01465Q8N7H1 131 aa9.49□□□□□ -0.89
CTNNA1-203ENST00000517534 VN1R2Q8NFZ6 395 aa9.49□□□□□ -0.89
CTNNA1-203ENST00000517534 EDAQ92838 391 aa9.49□□□□□ -0.89
CTNNA1-203ENST00000517534 KCNB2Q92953 911 aa9.49□□□□□ -0.89
CTNNA1-203ENST00000517534 PPP2R3CQ969Q6 453 aa9.49□□□□□ -0.89
CTNNA1-203ENST00000517534 FBXL18Q96ME1 805 aa9.49□□□□□ -0.89
CTNNA1-203ENST00000517534 ZMYND12Q9H0C1 365 aa9.49□□□□□ -0.89
CTNNA1-203ENST00000517534 C1orf112Q9NSG2 853 aa9.49□□□□□ -0.89
CTNNA1-203ENST00000517534 TYW1Q9NV66 732 aaKnown RBP9.49□□□□□ -0.89
CTNNA1-203ENST00000517534 LRFN2Q9ULH4 789 aa9.49□□□□□ -0.89
CTNNA1-203ENST00000517534 PCDHB7Q9Y5E2 793 aa9.49□□□□□ -0.89
CTNNA1-203ENST00000517534 ZNF318Q5VUA4 2279 aa9.49□□□□□ -0.89
CTNNA1-203ENST00000517534 KAT6AQ92794 2004 aa9.48□□□□□ -0.89
CTNNA1-203ENST00000517534 ESYT2A0FGR8 921 aa9.48□□□□□ -0.89
CTNNA1-203ENST00000517534 TBKBP1A7MCY6 615 aa9.48□□□□□ -0.89
CTNNA1-203ENST00000517534 FSCN2O14926 492 aa9.48□□□□□ -0.89
CTNNA1-203ENST00000517534 PER2O15055 1255 aa9.48□□□□□ -0.89
CTNNA1-203ENST00000517534 FGFR1P11362 822 aa9.48□□□□□ -0.89
CTNNA1-203ENST00000517534 CPA1P15085 419 aa9.48□□□□□ -0.89
CTNNA1-203ENST00000517534 IBSPP21815 317 aaPredicted RBP9.48□□□□□ -0.89
CTNNA1-203ENST00000517534 CIITAP33076 1130 aa9.48□□□□□ -0.89
CTNNA1-203ENST00000517534 RBM10P98175 930 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-203ENST00000517534 NHLH1Q02575 133 aa9.48□□□□□ -0.89
CTNNA1-203ENST00000517534 KCNC3Q14003 757 aa9.48□□□□□ -0.89
CTNNA1-203ENST00000517534 ZNF746Q6NUN9 644 aaPredicted RBP9.48□□□□□ -0.89
CTNNA1-203ENST00000517534 MIS18BP1Q6P0N0 1132 aa9.48□□□□□ -0.89
CTNNA1-203ENST00000517534 LRRC55Q6ZSA7 311 aa9.48□□□□□ -0.89
CTNNA1-203ENST00000517534 LENG9Q96B70 501 aa9.48□□□□□ -0.89
CTNNA1-203ENST00000517534 OSMRQ99650 979 aa9.48□□□□□ -0.89
CTNNA1-203ENST00000517534 KCNH6Q9H252 994 aa9.48□□□□□ -0.89
CTNNA1-203ENST00000517534 ADAMTS10Q9H324 1103 aa9.48□□□□□ -0.89
CTNNA1-203ENST00000517534 CWH43Q9H720 699 aa9.48□□□□□ -0.89
CTNNA1-203ENST00000517534 ELAC1Q9H777 363 aaKnown RBP9.48□□□□□ -0.89
CTNNA1-203ENST00000517534 TBC1D22BQ9NU19 505 aa9.48□□□□□ -0.89
CTNNA1-203ENST00000517534 RNF19AQ9NV58 838 aa9.48□□□□□ -0.89
CTNNA1-203ENST00000517534 BARX2Q9UMQ3 279 aaPredicted RBP9.48□□□□□ -0.89
CTNNA1-203ENST00000517534 USP15Q9Y4E8 981 aaPredicted RBP9.48□□□□□ -0.89
CTNNA1-203ENST00000517534 PCDHB12Q9Y5F1 795 aa9.48□□□□□ -0.89
CTNNA1-203ENST00000517534 USP34Q70CQ2 3546 aa9.47□□□□□ -0.89
CTNNA1-203ENST00000517534 RALGAPA2Q2PPJ7 1873 aa9.47□□□□□ -0.89
CTNNA1-203ENST00000517534 DENND3A2RUS2 1198 aa9.47□□□□□ -0.89
CTNNA1-203ENST00000517534 ZNF862O60290 1169 aa9.47□□□□□ -0.89
CTNNA1-203ENST00000517534 FGF18O76093 207 aa9.47□□□□□ -0.89
CTNNA1-203ENST00000517534 VTNP04004 478 aa9.47□□□□□ -0.89
CTNNA1-203ENST00000517534 PLCB3Q01970 1234 aa9.47□□□□□ -0.89
CTNNA1-203ENST00000517534 APOBRQ0VD83 1088 aa9.47□□□□□ -0.89
CTNNA1-203ENST00000517534 KRT32Q14532 448 aa9.47□□□□□ -0.89
CTNNA1-203ENST00000517534 DUSP6Q16828 381 aa9.47□□□□□ -0.89
CTNNA1-203ENST00000517534 ODR4Q5SWX8 454 aa9.47□□□□□ -0.89
CTNNA1-203ENST00000517534 BMP8AQ7Z5Y6 402 aa9.47□□□□□ -0.89
CTNNA1-203ENST00000517534 COLGALT1Q8NBJ5 622 aa9.47□□□□□ -0.89
CTNNA1-203ENST00000517534 SUSD6Q92537 303 aa9.47□□□□□ -0.89
CTNNA1-203ENST00000517534 MFSD14AQ96MC6 490 aa9.47□□□□□ -0.89
CTNNA1-203ENST00000517534 PPP1R16BQ96T49 567 aa9.47□□□□□ -0.89
CTNNA1-203ENST00000517534 ZNF577Q9BSK1 485 aa9.47□□□□□ -0.89
CTNNA1-203ENST00000517534 S1PR5Q9H228 398 aa9.47□□□□□ -0.89
CTNNA1-203ENST00000517534 TLE6Q9H808 572 aa9.47□□□□□ -0.89
CTNNA1-203ENST00000517534 ATP6V0A4Q9HBG4 840 aa9.47□□□□□ -0.89
CTNNA1-203ENST00000517534 TLR9Q9NR96 1032 aa9.47□□□□□ -0.89
CTNNA1-203ENST00000517534 TMEM161AQ9NX61 479 aa9.47□□□□□ -0.89
CTNNA1-203ENST00000517534 GABBR1Q9UBS5 961 aa9.47□□□□□ -0.89
CTNNA1-203ENST00000517534 PCDHA10Q9Y5I2 948 aa9.47□□□□□ -0.89
CTNNA1-203ENST00000517534 ZFHX2Q9C0A1 2572 aaPredicted RBP9.46□□□□□ -0.89
CTNNA1-203ENST00000517534 CCDC196A0A1B0GTZ2 297 aa9.46□□□□□ -0.9
CTNNA1-203ENST00000517534 MAGEB2O15479 319 aa9.46□□□□□ -0.9
CTNNA1-203ENST00000517534 PRPF3O43395 683 aaKnown RBP9.46□□□□□ -0.9
CTNNA1-203ENST00000517534 PSAPP07602 524 aa9.46□□□□□ -0.9
CTNNA1-203ENST00000517534 HMGB1P09429 215 aaKnown RBP9.46□□□□□ -0.9
CTNNA1-203ENST00000517534 METAP2P50579 478 aaKnown RBP eCLIP9.46□□□□□ -0.9
CTNNA1-203ENST00000517534 CLCN3P51790 818 aa9.46□□□□□ -0.9
CTNNA1-203ENST00000517534 ZXDAP98168 799 aa9.46□□□□□ -0.9
CTNNA1-203ENST00000517534 SETQ01105 290 aaPredicted RBP9.46□□□□□ -0.9
CTNNA1-203ENST00000517534 NTRK3Q16288 839 aa9.46□□□□□ -0.9
CTNNA1-203ENST00000517534 PRR16Q569H4 304 aa9.46□□□□□ -0.9
CTNNA1-203ENST00000517534 SPOUT1Q5T280 376 aaKnown RBP9.46□□□□□ -0.9
CTNNA1-203ENST00000517534 MCTP2Q6DN12 878 aa9.46□□□□□ -0.9
CTNNA1-203ENST00000517534 TMEM184AQ6ZMB5 413 aa9.46□□□□□ -0.9
CTNNA1-203ENST00000517534 TRIM67Q6ZTA4 783 aa9.46□□□□□ -0.9
CTNNA1-203ENST00000517534 Q6ZUG5 572 aa9.46□□□□□ -0.9
CTNNA1-203ENST00000517534 TRMT1LQ7Z2T5 733 aaKnown RBP9.46□□□□□ -0.9
CTNNA1-203ENST00000517534 CKAP2LQ8IYA6 745 aa9.46□□□□□ -0.9
CTNNA1-203ENST00000517534 SMAP1Q8IYB5 467 aaPredicted RBP9.46□□□□□ -0.9
CTNNA1-203ENST00000517534 REXO1Q8N1G1 1221 aaKnown RBP9.46□□□□□ -0.9
CTNNA1-203ENST00000517534 FBXL16Q8N461 479 aa9.46□□□□□ -0.9
CTNNA1-203ENST00000517534 METTL13Q8N6R0 699 aa9.46□□□□□ -0.9
CTNNA1-203ENST00000517534 RASGRP4Q8TDF6 673 aa9.46□□□□□ -0.9
CTNNA1-203ENST00000517534 MICAL1Q8TDZ2 1067 aa9.46□□□□□ -0.9
CTNNA1-203ENST00000517534 PHKBQ93100 1093 aa9.46□□□□□ -0.9
CTNNA1-203ENST00000517534 CASD1Q96PB1 797 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms