RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 HOXD11P31277 338 aaPredicted RBP16.53■□□□□ 0.24
SCARNA20.5-201ENST00000516991 HSPA4P34932 840 aa16.53■□□□□ 0.24
SCARNA20.5-201ENST00000516991 GTF2F1P35269 517 aaKnown RBP eCLIP16.53■□□□□ 0.24
SCARNA20.5-201ENST00000516991 GATMP50440 423 aa16.53■□□□□ 0.24
SCARNA20.5-201ENST00000516991 PKN1Q16512 942 aa16.53■□□□□ 0.24
SCARNA20.5-201ENST00000516991 KIZQ2M2Z5 673 aa16.53■□□□□ 0.24
SCARNA20.5-201ENST00000516991 FAM228AQ86W67 206 aa16.53■□□□□ 0.24
SCARNA20.5-201ENST00000516991 METTL13Q8N6R0 699 aa16.53■□□□□ 0.24
SCARNA20.5-201ENST00000516991 MSLNLQ96KJ4 702 aa16.53■□□□□ 0.24
SCARNA20.5-201ENST00000516991 OSMRQ99650 979 aa16.53■□□□□ 0.24
SCARNA20.5-201ENST00000516991 AGXT2Q9BYV1 514 aa16.53■□□□□ 0.24
SCARNA20.5-201ENST00000516991 ELAC1Q9H777 363 aaKnown RBP16.53■□□□□ 0.24
SCARNA20.5-201ENST00000516991 CDHR5Q9HBB8 845 aa16.53■□□□□ 0.24
SCARNA20.5-201ENST00000516991 ATP6V0A4Q9HBG4 840 aa16.53■□□□□ 0.24
SCARNA20.5-201ENST00000516991 TMEM161AQ9NX61 479 aa16.53■□□□□ 0.24
SCARNA20.5-201ENST00000516991 SNX14Q9Y5W7 946 aa16.53■□□□□ 0.24
SCARNA20.5-201ENST00000516991 PIEZO1Q92508 2521 aa16.53■□□□□ 0.24
SCARNA20.5-201ENST00000516991 HOXA2O43364 376 aa16.52■□□□□ 0.24
SCARNA20.5-201ENST00000516991 LAG3P18627 525 aa16.52■□□□□ 0.24
SCARNA20.5-201ENST00000516991 RPS6KB1P23443 525 aa16.52■□□□□ 0.24
SCARNA20.5-201ENST00000516991 PSMA5P28066 241 aa16.52■□□□□ 0.24
SCARNA20.5-201ENST00000516991 TMOD1P28289 359 aa16.52■□□□□ 0.24
SCARNA20.5-201ENST00000516991 IRS1P35568 1242 aa16.52■□□□□ 0.24
SCARNA20.5-201ENST00000516991 NRIP1P48552 1158 aa16.52■□□□□ 0.24
SCARNA20.5-201ENST00000516991 PDE12Q6L8Q7 609 aaKnown RBP16.52■□□□□ 0.24
SCARNA20.5-201ENST00000516991 ADGRD2Q7Z7M1 963 aa16.52■□□□□ 0.24
SCARNA20.5-201ENST00000516991 SMRP1Q8NCR6 262 aa16.52■□□□□ 0.24
SCARNA20.5-201ENST00000516991 UIMC1Q96RL1 719 aa16.52■□□□□ 0.24
SCARNA20.5-201ENST00000516991 CDCA3Q99618 268 aaPredicted RBP16.52■□□□□ 0.24
SCARNA20.5-201ENST00000516991 GABBR1Q9UBS5 961 aa16.52■□□□□ 0.24
SCARNA20.5-201ENST00000516991 SAMM50Q9Y512 469 aa16.52■□□□□ 0.24
SCARNA20.5-201ENST00000516991 GPR32O75388 356 aa16.51■□□□□ 0.23
SCARNA20.5-201ENST00000516991 REC8O95072 547 aa16.51■□□□□ 0.23
SCARNA20.5-201ENST00000516991 VTNP04004 478 aa16.51■□□□□ 0.23
SCARNA20.5-201ENST00000516991 IFNAR1P17181 557 aa16.51■□□□□ 0.23
SCARNA20.5-201ENST00000516991 COASYQ13057 564 aa16.51■□□□□ 0.23
SCARNA20.5-201ENST00000516991 DSC3Q14574 896 aa16.51■□□□□ 0.23
SCARNA20.5-201ENST00000516991 THNSL1Q8IYQ7 743 aa16.51■□□□□ 0.23
SCARNA20.5-201ENST00000516991 COLGALT1Q8NBJ5 622 aa16.51■□□□□ 0.23
SCARNA20.5-201ENST00000516991 PHKBQ93100 1093 aa16.51■□□□□ 0.23
SCARNA20.5-201ENST00000516991 LENG9Q96B70 501 aa16.51■□□□□ 0.23
SCARNA20.5-201ENST00000516991 PPP1R16BQ96T49 567 aa16.51■□□□□ 0.23
SCARNA20.5-201ENST00000516991 RIT2Q99578 217 aa16.51■□□□□ 0.23
SCARNA20.5-201ENST00000516991 C22orf23Q9BZE7 217 aa16.51■□□□□ 0.23
SCARNA20.5-201ENST00000516991 SH3GLB2Q9NR46 395 aa16.51■□□□□ 0.23
SCARNA20.5-201ENST00000516991 TLR9Q9NR96 1032 aa16.51■□□□□ 0.23
SCARNA20.5-201ENST00000516991 AKT3Q9Y243 479 aa16.51■□□□□ 0.23
SCARNA20.5-201ENST00000516991 GAS7O60861 476 aa16.5■□□□□ 0.23
SCARNA20.5-201ENST00000516991 FGF18O76093 207 aa16.5■□□□□ 0.23
SCARNA20.5-201ENST00000516991 OATP04181 439 aa16.5■□□□□ 0.23
SCARNA20.5-201ENST00000516991 SFNP31947 248 aa16.5■□□□□ 0.23
SCARNA20.5-201ENST00000516991 USP11P51784 963 aa16.5■□□□□ 0.23
SCARNA20.5-201ENST00000516991 CLCN3P51790 818 aa16.5■□□□□ 0.23
SCARNA20.5-201ENST00000516991 JAK3P52333 1124 aa16.5■□□□□ 0.23
SCARNA20.5-201ENST00000516991 FAM189BP81408 668 aa16.5■□□□□ 0.23
SCARNA20.5-201ENST00000516991 PRKCEQ02156 737 aa16.5■□□□□ 0.23
SCARNA20.5-201ENST00000516991 NTRK3Q16288 839 aa16.5■□□□□ 0.23
SCARNA20.5-201ENST00000516991 HERC4Q5GLZ8 1057 aaPredicted RBP16.5■□□□□ 0.23
SCARNA20.5-201ENST00000516991 RASGRP4Q8TDF6 673 aa16.5■□□□□ 0.23
SCARNA20.5-201ENST00000516991 SLC26A6Q9BXS9 759 aa16.5■□□□□ 0.23
SCARNA20.5-201ENST00000516991 TMEM117Q9H0C3 514 aa16.5■□□□□ 0.23
SCARNA20.5-201ENST00000516991 KCNH6Q9H252 994 aa16.5■□□□□ 0.23
SCARNA20.5-201ENST00000516991 TLE6Q9H808 572 aa16.5■□□□□ 0.23
SCARNA20.5-201ENST00000516991 DISC1Q9NRI5 854 aa16.5■□□□□ 0.23
SCARNA20.5-201ENST00000516991 NRBP2Q9NSY0 501 aa16.5■□□□□ 0.23
SCARNA20.5-201ENST00000516991 CLEC1BQ9P126 229 aa16.5■□□□□ 0.23
SCARNA20.5-201ENST00000516991 LZTS1Q9Y250 596 aa16.5■□□□□ 0.23
SCARNA20.5-201ENST00000516991 ADAMTS3O15072 1205 aa16.49■□□□□ 0.23
SCARNA20.5-201ENST00000516991 GLP2RO95838 553 aa16.49■□□□□ 0.23
SCARNA20.5-201ENST00000516991 SRGAP2BP0DMP2 458 aa16.49■□□□□ 0.23
SCARNA20.5-201ENST00000516991 PPM1AP35813 382 aa16.49■□□□□ 0.23
SCARNA20.5-201ENST00000516991 EVCP57679 992 aa16.49■□□□□ 0.23
SCARNA20.5-201ENST00000516991 NLRP11P59045 1033 aaKnown RBP16.49■□□□□ 0.23
SCARNA20.5-201ENST00000516991 FAM102BQ5T8I3 360 aa16.49■□□□□ 0.23
SCARNA20.5-201ENST00000516991 EFCAB12Q6NXP0 572 aa16.49■□□□□ 0.23
SCARNA20.5-201ENST00000516991 TRMT1LQ7Z2T5 733 aaKnown RBP16.49■□□□□ 0.23
SCARNA20.5-201ENST00000516991 TRIM22Q8IYM9 498 aa16.49■□□□□ 0.23
SCARNA20.5-201ENST00000516991 ABI1Q8IZP0 508 aa16.49■□□□□ 0.23
SCARNA20.5-201ENST00000516991 LRRC43Q8N309 656 aa16.49■□□□□ 0.23
SCARNA20.5-201ENST00000516991 LINC01465Q8N7H1 131 aa16.49■□□□□ 0.23
SCARNA20.5-201ENST00000516991 RDM1Q8NG50 284 aa16.49■□□□□ 0.23
SCARNA20.5-201ENST00000516991 MICAL1Q8TDZ2 1067 aa16.49■□□□□ 0.23
SCARNA20.5-201ENST00000516991 CCDC136Q96JN2 1154 aa16.49■□□□□ 0.23
SCARNA20.5-201ENST00000516991 TEKT3Q9BXF9 490 aa16.49■□□□□ 0.23
SCARNA20.5-201ENST00000516991 VPS54Q9P1Q0 977 aa16.49■□□□□ 0.23
SCARNA20.5-201ENST00000516991 MSH4O15457 936 aa16.48■□□□□ 0.23
SCARNA20.5-201ENST00000516991 EPB41L2O43491 1005 aaKnown RBP16.48■□□□□ 0.23
SCARNA20.5-201ENST00000516991 ZNF862O60290 1169 aa16.48■□□□□ 0.23
SCARNA20.5-201ENST00000516991 FGFR1P11362 822 aa16.48■□□□□ 0.23
SCARNA20.5-201ENST00000516991 ZSCAN20P17040 1043 aaPredicted RBP16.48■□□□□ 0.23
SCARNA20.5-201ENST00000516991 EIF4BP23588 611 aaKnown RBP16.48■□□□□ 0.23
SCARNA20.5-201ENST00000516991 NLRP5P59047 1200 aa16.48■□□□□ 0.23
SCARNA20.5-201ENST00000516991 DUSP6Q16828 381 aa16.48■□□□□ 0.23
SCARNA20.5-201ENST00000516991 LRCH2Q5VUJ6 765 aa16.48■□□□□ 0.23
SCARNA20.5-201ENST00000516991 RBM23Q86U06 439 aaKnown RBP16.48■□□□□ 0.23
SCARNA20.5-201ENST00000516991 RNF135Q8IUD6 432 aa16.48■□□□□ 0.23
SCARNA20.5-201ENST00000516991 FAM177A1Q8N128 213 aaPredicted RBP16.48■□□□□ 0.23
SCARNA20.5-201ENST00000516991 SLC5A5Q92911 643 aa16.48■□□□□ 0.23
SCARNA20.5-201ENST00000516991 SCLT1Q96NL6 688 aa16.48■□□□□ 0.23
SCARNA20.5-201ENST00000516991 ADAMTS10Q9H324 1103 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms