RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 CWH43Q9H720 699 aa17.92■□□□□ 0.46
LMNA-223ENST00000515459 ENTPD7Q9NQZ7 604 aa17.92■□□□□ 0.46
LMNA-223ENST00000515459 RBM28Q9NW13 759 aaKnown RBP17.92■□□□□ 0.46
LMNA-223ENST00000515459 ZDBF2Q9HCK1 2354 aa17.91■□□□□ 0.46
LMNA-223ENST00000515459 SMCO2A6NFE2 343 aa17.91■□□□□ 0.46
LMNA-223ENST00000515459 ZBTB42B2RXF5 422 aa17.91■□□□□ 0.46
LMNA-223ENST00000515459 hCG_1984214I3L0E3 225 aa17.91■□□□□ 0.46
LMNA-223ENST00000515459 AVPR2P30518 371 aa17.91■□□□□ 0.46
LMNA-223ENST00000515459 VCPP55072 806 aaKnown RBP17.91■□□□□ 0.46
LMNA-223ENST00000515459 FAM189BP81408 668 aa17.91■□□□□ 0.46
LMNA-223ENST00000515459 APOBRQ0VD83 1088 aa17.91■□□□□ 0.46
LMNA-223ENST00000515459 SWSAP1Q6NVH7 229 aa17.91■□□□□ 0.46
LMNA-223ENST00000515459 MIS18BP1Q6P0N0 1132 aa17.91■□□□□ 0.46
LMNA-223ENST00000515459 ZBTB33Q86T24 672 aa17.91■□□□□ 0.46
LMNA-223ENST00000515459 FAM228AQ86W67 206 aa17.91■□□□□ 0.46
LMNA-223ENST00000515459 ZNF713Q8N859 430 aaPredicted RBP17.91■□□□□ 0.46
LMNA-223ENST00000515459 SNX27Q96L92 541 aa17.91■□□□□ 0.46
LMNA-223ENST00000515459 PPP1R16BQ96T49 567 aa17.91■□□□□ 0.46
LMNA-223ENST00000515459 TMEM117Q9H0C3 514 aa17.91■□□□□ 0.46
LMNA-223ENST00000515459 NGRNQ9NPE2 291 aaKnown RBP17.91■□□□□ 0.46
LMNA-223ENST00000515459 HOXA2O43364 376 aa17.9■□□□□ 0.46
LMNA-223ENST00000515459 C22orf31O95567 290 aa17.9■□□□□ 0.46
LMNA-223ENST00000515459 HOXB8P17481 243 aaPredicted RBP17.9■□□□□ 0.46
LMNA-223ENST00000515459 DSC3Q14574 896 aa17.9■□□□□ 0.46
LMNA-223ENST00000515459 CREB3L3Q68CJ9 461 aa17.9■□□□□ 0.46
LMNA-223ENST00000515459 LLGL2Q6P1M3 1020 aa17.9■□□□□ 0.46
LMNA-223ENST00000515459 SYCE2Q6PIF2 218 aa17.9■□□□□ 0.46
LMNA-223ENST00000515459 APOA5Q6Q788 366 aa17.9■□□□□ 0.46
LMNA-223ENST00000515459 PLA2G4DQ86XP0 818 aa17.9■□□□□ 0.46
LMNA-223ENST00000515459 CKAP2LQ8IYA6 745 aa17.9■□□□□ 0.46
LMNA-223ENST00000515459 METTL13Q8N6R0 699 aa17.9■□□□□ 0.46
LMNA-223ENST00000515459 BBXQ8WY36 941 aaPredicted RBP17.9■□□□□ 0.46
LMNA-223ENST00000515459 GLT8D2Q9H1C3 349 aa17.9■□□□□ 0.46
LMNA-223ENST00000515459 FAM86B1E9PN63 330 aa17.89■□□□□ 0.45
LMNA-223ENST00000515459 IPO5O00410 1097 aaKnown RBP17.89■□□□□ 0.45
LMNA-223ENST00000515459 DHX15O43143 795 aaKnown RBP17.89■□□□□ 0.45
LMNA-223ENST00000515459 GPR32O75388 356 aa17.89■□□□□ 0.45
LMNA-223ENST00000515459 VTNP04004 478 aa17.89■□□□□ 0.45
LMNA-223ENST00000515459 FAM86B2P0C5J1 330 aa17.89■□□□□ 0.45
LMNA-223ENST00000515459 ATP4AP20648 1035 aa17.89■□□□□ 0.45
LMNA-223ENST00000515459 PPM1AP35813 382 aa17.89■□□□□ 0.45
LMNA-223ENST00000515459 CLK2P49760 499 aaKnown RBP17.89■□□□□ 0.45
LMNA-223ENST00000515459 KRT17Q04695 432 aa17.89■□□□□ 0.45
LMNA-223ENST00000515459 NECTIN1Q15223 517 aa17.89■□□□□ 0.45
LMNA-223ENST00000515459 KCNT2Q6UVM3 1135 aa17.89■□□□□ 0.45
LMNA-223ENST00000515459 ZNF558Q96NG5 402 aa17.89■□□□□ 0.45
LMNA-223ENST00000515459 APOL5Q9BWW9 433 aa17.89■□□□□ 0.45
LMNA-223ENST00000515459 FAM86C1Q9NVL1 165 aa17.89■□□□□ 0.45
LMNA-223ENST00000515459 BARHL2Q9NY43 387 aa17.89■□□□□ 0.45
LMNA-223ENST00000515459 NR2E1Q9Y466 385 aa17.89■□□□□ 0.45
LMNA-223ENST00000515459 V9GY48 417 aaPredicted RBP17.89■□□□□ 0.45
LMNA-223ENST00000515459 HIDE1A8MVS5 230 aa17.88■□□□□ 0.45
LMNA-223ENST00000515459 GFRA3O60609 400 aa17.88■□□□□ 0.45
LMNA-223ENST00000515459 SP100P23497 879 aaPredicted RBP17.88■□□□□ 0.45
LMNA-223ENST00000515459 NUBP1P53384 320 aa17.88■□□□□ 0.45
LMNA-223ENST00000515459 FUT2Q10981 343 aa17.88■□□□□ 0.45
LMNA-223ENST00000515459 RTN1Q16799 776 aa17.88■□□□□ 0.45
LMNA-223ENST00000515459 LRRC55Q6ZSA7 311 aa17.88■□□□□ 0.45
LMNA-223ENST00000515459 ABI1Q8IZP0 508 aa17.88■□□□□ 0.45
LMNA-223ENST00000515459 LRRC43Q8N309 656 aa17.88■□□□□ 0.45
LMNA-223ENST00000515459 ATOH1Q92858 354 aaPredicted RBP17.88■□□□□ 0.45
LMNA-223ENST00000515459 RIPOR3Q96MK2 946 aa17.88■□□□□ 0.45
LMNA-223ENST00000515459 CASD1Q96PB1 797 aa17.88■□□□□ 0.45
LMNA-223ENST00000515459 TBC1D22BQ9NU19 505 aa17.88■□□□□ 0.45
LMNA-223ENST00000515459 CEP131Q9UPN4 1083 aa17.88■□□□□ 0.45
LMNA-223ENST00000515459 MAFBQ9Y5Q3 323 aaPredicted RBP17.88■□□□□ 0.45
LMNA-223ENST00000515459 IGLV3-22A0A075B6J6 115 aa17.87■□□□□ 0.45
LMNA-223ENST00000515459 ZSCAN20P17040 1043 aaPredicted RBP17.87■□□□□ 0.45
LMNA-223ENST00000515459 TPRNQ4KMQ1 711 aa17.87■□□□□ 0.45
LMNA-223ENST00000515459 ZNF746Q6NUN9 644 aaPredicted RBP17.87■□□□□ 0.45
LMNA-223ENST00000515459 TRMT1LQ7Z2T5 733 aaKnown RBP17.87■□□□□ 0.45
LMNA-223ENST00000515459 TMC7Q7Z402 723 aa17.87■□□□□ 0.45
LMNA-223ENST00000515459 CASP10Q92851 521 aa17.87■□□□□ 0.45
LMNA-223ENST00000515459 ZNF577Q9BSK1 485 aa17.87■□□□□ 0.45
LMNA-223ENST00000515459 WDR81Q562E7 1941 aa17.87■□□□□ 0.45
LMNA-223ENST00000515459 USP34Q70CQ2 3546 aa17.87■□□□□ 0.45
LMNA-223ENST00000515459 MAGEB2O15479 319 aa17.86■□□□□ 0.45
LMNA-223ENST00000515459 ZBTB43O43298 467 aa17.86■□□□□ 0.45
LMNA-223ENST00000515459 PDGFBP01127 241 aaPredicted RBP17.86■□□□□ 0.45
LMNA-223ENST00000515459 CYP3A4P08684 503 aa17.86■□□□□ 0.45
LMNA-223ENST00000515459 PBX3P40426 434 aa17.86■□□□□ 0.45
LMNA-223ENST00000515459 NLRP11P59045 1033 aaKnown RBP17.86■□□□□ 0.45
LMNA-223ENST00000515459 JAKMIP3Q5VZ66 844 aa17.86■□□□□ 0.45
LMNA-223ENST00000515459 CES5AQ6NT32 575 aa17.86■□□□□ 0.45
LMNA-223ENST00000515459 SMAP1Q8IYB5 467 aaPredicted RBP17.86■□□□□ 0.45
LMNA-223ENST00000515459 KREMEN2Q8NCW0 462 aa17.86■□□□□ 0.45
LMNA-223ENST00000515459 CRYGNQ8WXF5 182 aa17.86■□□□□ 0.45
LMNA-223ENST00000515459 YTHDC1Q96MU7 727 aaKnown RBP17.86■□□□□ 0.45
LMNA-223ENST00000515459 MAP7D2Q96T17 732 aa17.86■□□□□ 0.45
LMNA-223ENST00000515459 ESYT1Q9BSJ8 1104 aa17.86■□□□□ 0.45
LMNA-223ENST00000515459 ANO2Q9NQ90 1003 aa17.86■□□□□ 0.45
LMNA-223ENST00000515459 TSHZ2Q9NRE2 1034 aa17.86■□□□□ 0.45
LMNA-223ENST00000515459 RNF19AQ9NV58 838 aa17.86■□□□□ 0.45
LMNA-223ENST00000515459 SPG21Q9NZD8 308 aa17.86■□□□□ 0.45
LMNA-223ENST00000515459 TCEAL9Q9UHQ7 104 aa17.86■□□□□ 0.45
LMNA-223ENST00000515459 BRPF3Q9ULD4 1205 aa17.86■□□□□ 0.45
LMNA-223ENST00000515459 SORCS3Q9UPU3 1222 aa17.86■□□□□ 0.45
LMNA-223ENST00000515459 AKT3Q9Y243 479 aa17.86■□□□□ 0.45
LMNA-223ENST00000515459 PSAPP07602 524 aa17.85■□□□□ 0.45
LMNA-223ENST00000515459 CLCN3P51790 818 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms