RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 RAPGEF1Q13905 1077 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 POTEEQ6S8J3 1075 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 SV2BQ7L1I2 683 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 DAAM2Q86T65 1068 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 CADPS2Q86UW7 1296 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 LCORLQ8N3X6 602 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 DAGLBQ8NCG7 672 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 IFT43Q96FT9 208 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 CEP63Q96MT8 703 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 PACSIN1Q9BY11 444 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 MTFR1LQ9H019 292 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 ZBTB3Q9H5J0 574 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 ETNK1Q9HBU6 452 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 DMAP1Q9NPF5 467 aaPredicted RBP13.87□□□□□ -0.19
SMAD1-215ENST00000515385 FGFR1OP2Q9NVK5 253 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 MROH7Q68CQ1 1323 aa13.87□□□□□ -0.19
SMAD1-215ENST00000515385 RREB1Q92766 1687 aa13.86□□□□□ -0.19
SMAD1-215ENST00000515385 RANBP1P43487 201 aa13.86□□□□□ -0.19
SMAD1-215ENST00000515385 RASSF2P50749 326 aa13.86□□□□□ -0.19
SMAD1-215ENST00000515385 CABP4P57796 275 aa13.86□□□□□ -0.19
SMAD1-215ENST00000515385 SLC29A2Q14542 456 aa13.86□□□□□ -0.19
SMAD1-215ENST00000515385 ARMCX6Q7L4S7 300 aa13.86□□□□□ -0.19
SMAD1-215ENST00000515385 MIPOL1Q8TD10 442 aa13.86□□□□□ -0.19
SMAD1-215ENST00000515385 MAIP1Q8WWC4 291 aa13.86□□□□□ -0.19
SMAD1-215ENST00000515385 CKAP2Q8WWK9 683 aa13.86□□□□□ -0.19
SMAD1-215ENST00000515385 ARHGEF1Q92888 912 aaKnown RBP13.86□□□□□ -0.19
SMAD1-215ENST00000515385 CALML4Q96GE6 196 aa13.86□□□□□ -0.19
SMAD1-215ENST00000515385 HES6Q96HZ4 224 aa13.86□□□□□ -0.19
SMAD1-215ENST00000515385 PLIN2Q99541 437 aa13.86□□□□□ -0.19
SMAD1-215ENST00000515385 USP40Q9NVE5 1235 aa13.86□□□□□ -0.19
SMAD1-215ENST00000515385 NKX1-2Q9UD57 310 aaPredicted RBP13.86□□□□□ -0.19
SMAD1-215ENST00000515385 STK17AQ9UEE5 414 aa13.86□□□□□ -0.19
SMAD1-215ENST00000515385 LRCH1Q9Y2L9 728 aa13.86□□□□□ -0.19
SMAD1-215ENST00000515385 PYGLP06737 847 aa13.86□□□□□ -0.19
SMAD1-215ENST00000515385 FKBP3Q00688 224 aaKnown RBP13.86□□□□□ -0.19
SMAD1-215ENST00000515385 PUM3Q15397 648 aaKnown RBP13.86□□□□□ -0.19
SMAD1-215ENST00000515385 KIAA1755Q5JYT7 1200 aa13.86□□□□□ -0.19
SMAD1-215ENST00000515385 OR52E8Q6IFG1 317 aa13.86□□□□□ -0.19
SMAD1-215ENST00000515385 ZBTB38Q8NAP3 1195 aaPredicted RBP13.86□□□□□ -0.19
SMAD1-215ENST00000515385 RPS6KC1Q96S38 1066 aa13.86□□□□□ -0.19
SMAD1-215ENST00000515385 SLX1AQ9BQ83 275 aa13.86□□□□□ -0.19
SMAD1-215ENST00000515385 CCDC28BQ9BUN5 200 aa13.86□□□□□ -0.19
SMAD1-215ENST00000515385 CELF4Q9BZC1 486 aaKnown RBP13.86□□□□□ -0.19
SMAD1-215ENST00000515385 TMEM60Q9H2L4 133 aa13.86□□□□□ -0.19
SMAD1-215ENST00000515385 VCX3BQ9H321 246 aa13.86□□□□□ -0.19
SMAD1-215ENST00000515385 VCX3AQ9NNX9 186 aa13.86□□□□□ -0.19
SMAD1-215ENST00000515385 PNMA3Q9UL41 463 aa13.86□□□□□ -0.19
SMAD1-215ENST00000515385 GLI3P10071 1580 aa13.85□□□□□ -0.19
SMAD1-215ENST00000515385 BCORQ6W2J9 1755 aa13.85□□□□□ -0.19
SMAD1-215ENST00000515385 PDHA1P08559 390 aa13.85□□□□□ -0.19
SMAD1-215ENST00000515385 FGRP09769 529 aa13.85□□□□□ -0.19
SMAD1-215ENST00000515385 SKIP12755 728 aa13.85□□□□□ -0.19
SMAD1-215ENST00000515385 MARSP56192 900 aaKnown RBP13.85□□□□□ -0.19
SMAD1-215ENST00000515385 AUHQ13825 339 aaKnown RBP13.85□□□□□ -0.19
SMAD1-215ENST00000515385 SPDYAQ5MJ70 313 aa13.85□□□□□ -0.19
SMAD1-215ENST00000515385 LRRC15Q8TF66 581 aa13.85□□□□□ -0.19
SMAD1-215ENST00000515385 FAM136AQ96C01 138 aa13.85□□□□□ -0.19
SMAD1-215ENST00000515385 NUDCD1Q96RS6 583 aa13.85□□□□□ -0.19
SMAD1-215ENST00000515385 TRIM51Q9BSJ1 452 aa13.85□□□□□ -0.19
SMAD1-215ENST00000515385 MAF1Q9H063 256 aa13.85□□□□□ -0.19
SMAD1-215ENST00000515385 DCLRE1BQ9H816 532 aa13.85□□□□□ -0.19
SMAD1-215ENST00000515385 PIDD1Q9HB75 910 aa13.85□□□□□ -0.19
SMAD1-215ENST00000515385 DLGAP2Q9P1A6 1054 aa13.85□□□□□ -0.19
SMAD1-215ENST00000515385 PDP2Q9P2J9 529 aa13.85□□□□□ -0.19
SMAD1-215ENST00000515385 STOML1Q9UBI4 398 aa13.85□□□□□ -0.19
SMAD1-215ENST00000515385 AMFRQ9UKV5 643 aa13.85□□□□□ -0.19
SMAD1-215ENST00000515385 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.85□□□□□ -0.19
SMAD1-215ENST00000515385 SLC4A7Q9Y6M7 1214 aa13.85□□□□□ -0.19
SMAD1-215ENST00000515385 PCDH11XQ9BZA7 1347 aa13.85□□□□□ -0.19
SMAD1-215ENST00000515385 M0R2N6 131 aa13.84□□□□□ -0.19
SMAD1-215ENST00000515385 PENKP01210 267 aaPredicted RBP13.84□□□□□ -0.19
SMAD1-215ENST00000515385 OR52Z1P0C646 297 aa13.84□□□□□ -0.19
SMAD1-215ENST00000515385 HSPA6P17066 643 aa13.84□□□□□ -0.19
SMAD1-215ENST00000515385 GNAQP50148 359 aa13.84□□□□□ -0.19
SMAD1-215ENST00000515385 TUBP50607 506 aa13.84□□□□□ -0.19
SMAD1-215ENST00000515385 ORC2Q13416 577 aaPredicted RBP13.84□□□□□ -0.19
SMAD1-215ENST00000515385 MUM1Q2TAK8 710 aa13.84□□□□□ -0.19
SMAD1-215ENST00000515385 INTS8Q75QN2 995 aaKnown RBP13.84□□□□□ -0.19
SMAD1-215ENST00000515385 NT5DC3Q86UY8 548 aa13.84□□□□□ -0.19
SMAD1-215ENST00000515385 VPS36Q86VN1 386 aa13.84□□□□□ -0.19
SMAD1-215ENST00000515385 UTP4Q969X6 686 aaKnown RBP13.84□□□□□ -0.19
SMAD1-215ENST00000515385 TAOK3Q9H2K8 898 aa13.84□□□□□ -0.19
SMAD1-215ENST00000515385 ZWILCHQ9H900 591 aa13.84□□□□□ -0.19
SMAD1-215ENST00000515385 GGT7Q9UJ14 662 aa13.84□□□□□ -0.19
SMAD1-215ENST00000515385 DOCK2Q92608 1830 aa13.84□□□□□ -0.19
SMAD1-215ENST00000515385 MINDY4BA8MYZ0 360 aa13.84□□□□□ -0.19
SMAD1-215ENST00000515385 PODXLO00592 558 aa13.84□□□□□ -0.19
SMAD1-215ENST00000515385 RARGP13631 454 aa13.84□□□□□ -0.19
SMAD1-215ENST00000515385 POLE2P56282 527 aa13.84□□□□□ -0.19
SMAD1-215ENST00000515385 SFSWAPQ12872 951 aaKnown RBP13.84□□□□□ -0.19
SMAD1-215ENST00000515385 SF3A3Q12874 501 aaKnown RBP eCLIP13.84□□□□□ -0.19
SMAD1-215ENST00000515385 CHADLQ6NUI6 762 aa13.84□□□□□ -0.19
SMAD1-215ENST00000515385 EXOC3L1Q86VI1 746 aa13.84□□□□□ -0.19
SMAD1-215ENST00000515385 GPIHBP1Q8IV16 184 aa13.84□□□□□ -0.19
SMAD1-215ENST00000515385 FAM133AQ8N9E0 248 aa13.84□□□□□ -0.19
SMAD1-215ENST00000515385 SERPINB12Q96P63 405 aa13.84□□□□□ -0.19
SMAD1-215ENST00000515385 TIPINQ9BVW5 301 aa13.84□□□□□ -0.19
SMAD1-215ENST00000515385 NAGPAQ9UK23 515 aa13.84□□□□□ -0.19
SMAD1-215ENST00000515385 RPTORQ8N122 1335 aa13.84□□□□□ -0.19
SMAD1-215ENST00000515385 KIAA0391O15091 583 aaKnown RBP13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms