RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 RSPO2Q6UXX9 243 aaPredicted RBP8.97□□□□□ -0.97
CLDND1-229ENST00000513988 RSPH3Q86UC2 560 aa8.97□□□□□ -0.97
CLDND1-229ENST00000513988 FAM160A2Q8N612 972 aaPredicted RBP8.97□□□□□ -0.97
CLDND1-229ENST00000513988 SPATA33Q96N06 139 aa8.97□□□□□ -0.97
CLDND1-229ENST00000513988 UBL7Q96S82 380 aaPredicted RBP8.97□□□□□ -0.97
CLDND1-229ENST00000513988 MYADMQ96S97 322 aa8.97□□□□□ -0.97
CLDND1-229ENST00000513988 C16orf70Q9BSU1 422 aa8.97□□□□□ -0.97
CLDND1-229ENST00000513988 ARRDC1-AS1Q9H2J1 176 aa8.97□□□□□ -0.97
CLDND1-229ENST00000513988 TUT1Q9H6E5 874 aaKnown RBP8.97□□□□□ -0.97
CLDND1-229ENST00000513988 ARMT1Q9H993 441 aa8.97□□□□□ -0.97
CLDND1-229ENST00000513988 MKNK2Q9HBH9 465 aa8.97□□□□□ -0.97
CLDND1-229ENST00000513988 KLK13Q9UKR3 277 aa8.97□□□□□ -0.97
CLDND1-229ENST00000513988 PCDHGA10Q9Y5H3 936 aa8.97□□□□□ -0.97
CLDND1-229ENST00000513988 MRVI1Q9Y6F6 885 aa8.97□□□□□ -0.97
CLDND1-229ENST00000513988 FPGT-TNNI3KV9GXZ4 949 aa8.97□□□□□ -0.97
CLDND1-229ENST00000513988 LOXHD1Q8IVV2 1947 aa8.97□□□□□ -0.97
CLDND1-229ENST00000513988 KIAA1217Q5T5P2 1943 aa8.96□□□□□ -0.97
CLDND1-229ENST00000513988 APC2O95996 2303 aa8.96□□□□□ -0.97
CLDND1-229ENST00000513988 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.96□□□□□ -0.98
CLDND1-229ENST00000513988 SORBS3O60504 671 aa8.96□□□□□ -0.98
CLDND1-229ENST00000513988 TTLL1O95922 423 aa8.96□□□□□ -0.98
CLDND1-229ENST00000513988 CEACAM1P13688 526 aa8.96□□□□□ -0.98
CLDND1-229ENST00000513988 PDE6AP16499 860 aa8.96□□□□□ -0.98
CLDND1-229ENST00000513988 CNR2P34972 360 aa8.96□□□□□ -0.98
CLDND1-229ENST00000513988 GPC5P78333 572 aa8.96□□□□□ -0.98
CLDND1-229ENST00000513988 ARHGAP4P98171 946 aa8.96□□□□□ -0.98
CLDND1-229ENST00000513988 MGAT3Q09327 533 aa8.96□□□□□ -0.98
CLDND1-229ENST00000513988 SRSF5Q13243 272 aaKnown RBP8.96□□□□□ -0.98
CLDND1-229ENST00000513988 SLC44A4Q53GD3 710 aa8.96□□□□□ -0.98
CLDND1-229ENST00000513988 DAB2IPQ5VWQ8 1189 aa8.96□□□□□ -0.98
CLDND1-229ENST00000513988 KCNT2Q6UVM3 1135 aa8.96□□□□□ -0.98
CLDND1-229ENST00000513988 C15orf39Q6ZRI6 1047 aa8.96□□□□□ -0.98
CLDND1-229ENST00000513988 KCTD1Q719H9 257 aa8.96□□□□□ -0.98
CLDND1-229ENST00000513988 CEP68Q76N32 757 aa8.96□□□□□ -0.98
CLDND1-229ENST00000513988 MRPL50Q8N5N7 158 aaKnown RBP8.96□□□□□ -0.98
CLDND1-229ENST00000513988 SLC22A17Q8WUG5 538 aa8.96□□□□□ -0.98
CLDND1-229ENST00000513988 CEP95Q96GE4 821 aa8.96□□□□□ -0.98
CLDND1-229ENST00000513988 GMCL1Q96IK5 515 aa8.96□□□□□ -0.98
CLDND1-229ENST00000513988 ZNF558Q96NG5 402 aa8.96□□□□□ -0.98
CLDND1-229ENST00000513988 NELL2Q99435 816 aa8.96□□□□□ -0.98
CLDND1-229ENST00000513988 CWH43Q9H720 699 aa8.96□□□□□ -0.98
CLDND1-229ENST00000513988 AGO3Q9H9G7 860 aaKnown RBP8.96□□□□□ -0.98
CLDND1-229ENST00000513988 SMC4Q9NTJ3 1288 aa8.96□□□□□ -0.98
CLDND1-229ENST00000513988 FAM217BQ9NTX9 383 aaPredicted RBP8.96□□□□□ -0.98
CLDND1-229ENST00000513988 MTMR4Q9NYA4 1195 aa8.96□□□□□ -0.98
CLDND1-229ENST00000513988 SPG21Q9NZD8 308 aa8.96□□□□□ -0.98
CLDND1-229ENST00000513988 DOCK8Q8NF50 2099 aa8.95□□□□□ -0.98
CLDND1-229ENST00000513988 IGKV6D-41A0A0C4DH26 115 aa8.95□□□□□ -0.98
CLDND1-229ENST00000513988 AXIN1O15169 862 aa8.95□□□□□ -0.98
CLDND1-229ENST00000513988 CAPNS1P04632 268 aa8.95□□□□□ -0.98
CLDND1-229ENST00000513988 MCCP23508 829 aa8.95□□□□□ -0.98
CLDND1-229ENST00000513988 TARSP26639 723 aaKnown RBP8.95□□□□□ -0.98
CLDND1-229ENST00000513988 SARSP49591 514 aaKnown RBP8.95□□□□□ -0.98
CLDND1-229ENST00000513988 CAMK2BQ13554 666 aa8.95□□□□□ -0.98
CLDND1-229ENST00000513988 HTR4Q13639 388 aa8.95□□□□□ -0.98
CLDND1-229ENST00000513988 STXBP2Q15833 593 aa8.95□□□□□ -0.98
CLDND1-229ENST00000513988 HSDL1Q3SXM5 330 aa8.95□□□□□ -0.98
CLDND1-229ENST00000513988 FAM102BQ5T8I3 360 aa8.95□□□□□ -0.98
CLDND1-229ENST00000513988 STK11IPQ8N1F8 1099 aa8.95□□□□□ -0.98
CLDND1-229ENST00000513988 SPRYD3Q8NCJ5 442 aa8.95□□□□□ -0.98
CLDND1-229ENST00000513988 SPATA18Q8TC71 538 aa8.95□□□□□ -0.98
CLDND1-229ENST00000513988 CLEC4DQ8WXI8 215 aa8.95□□□□□ -0.98
CLDND1-229ENST00000513988 SUPT16HQ9Y5B9 1047 aaKnown RBP8.95□□□□□ -0.98
CLDND1-229ENST00000513988 NUMBLQ9Y6R0 609 aa8.95□□□□□ -0.98
CLDND1-229ENST00000513988 CELSR3Q9NYQ7 3312 aa8.95□□□□□ -0.98
CLDND1-229ENST00000513988 CLUHO75153 1309 aa8.95□□□□□ -0.98
CLDND1-229ENST00000513988 ZNF532Q9HCE3 1301 aa8.95□□□□□ -0.98
CLDND1-229ENST00000513988 ANHXE9PGG2 379 aa8.94□□□□□ -0.98
CLDND1-229ENST00000513988 MBD4O95243 580 aa8.94□□□□□ -0.98
CLDND1-229ENST00000513988 PBX3P40426 434 aa8.94□□□□□ -0.98
CLDND1-229ENST00000513988 MYSM1Q5VVJ2 828 aa8.94□□□□□ -0.98
CLDND1-229ENST00000513988 TAF2Q6P1X5 1199 aa8.94□□□□□ -0.98
CLDND1-229ENST00000513988 CTR9Q6PD62 1173 aa8.94□□□□□ -0.98
CLDND1-229ENST00000513988 PPFIBP1Q86W92 1011 aa8.94□□□□□ -0.98
CLDND1-229ENST00000513988 LMBR1Q8WVP7 490 aa8.94□□□□□ -0.98
CLDND1-229ENST00000513988 RANBP17Q9H2T7 1088 aaKnown RBP8.94□□□□□ -0.98
CLDND1-229ENST00000513988 WDR6Q9NNW5 1121 aaKnown RBP8.94□□□□□ -0.98
CLDND1-229ENST00000513988 MRPS17Q9Y2R5 130 aaKnown RBP8.94□□□□□ -0.98
CLDND1-229ENST00000513988 CDY2AQ9Y6F7 541 aa8.94□□□□□ -0.98
CLDND1-229ENST00000513988 SHROOM3Q8TF72 1996 aa8.93□□□□□ -0.98
CLDND1-229ENST00000513988 C4orf47A7E2U8 309 aa8.93□□□□□ -0.98
CLDND1-229ENST00000513988 CHURC1-FNTBB4DL54 471 aa8.93□□□□□ -0.98
CLDND1-229ENST00000513988 LILRB3O75022 631 aa8.93□□□□□ -0.98
CLDND1-229ENST00000513988 LGALS2P05162 132 aa8.93□□□□□ -0.98
CLDND1-229ENST00000513988 LAMP2P13473 410 aa8.93□□□□□ -0.98
CLDND1-229ENST00000513988 CSRP1P21291 193 aaKnown RBP8.93□□□□□ -0.98
CLDND1-229ENST00000513988 FNTBP49356 437 aa8.93□□□□□ -0.98
CLDND1-229ENST00000513988 CCR3P51677 355 aa8.93□□□□□ -0.98
CLDND1-229ENST00000513988 PFKPQ01813 784 aa8.93□□□□□ -0.98
CLDND1-229ENST00000513988 KCNC4Q03721 635 aa8.93□□□□□ -0.98
CLDND1-229ENST00000513988 ADCY1Q08828 1119 aa8.93□□□□□ -0.98
CLDND1-229ENST00000513988 PAK2Q13177 524 aa8.93□□□□□ -0.98
CLDND1-229ENST00000513988 MTX1Q13505 466 aa8.93□□□□□ -0.98
CLDND1-229ENST00000513988 CELF3Q5SZQ8 465 aaKnown RBP8.93□□□□□ -0.98
CLDND1-229ENST00000513988 RCSD1Q6JBY9 416 aa8.93□□□□□ -0.98
CLDND1-229ENST00000513988 TPRG1Q6ZUI0 275 aa8.93□□□□□ -0.98
CLDND1-229ENST00000513988 WDR63Q8IWG1 891 aa8.93□□□□□ -0.98
CLDND1-229ENST00000513988 ZNF843Q8N446 348 aa8.93□□□□□ -0.98
CLDND1-229ENST00000513988 ST13P5Q8NFI4 369 aaPredicted RBP8.93□□□□□ -0.98
CLDND1-229ENST00000513988 NSUN6Q8TEA1 469 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms