RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 FAM47CQ5HY64 1035 aa8.47□□□□□ -1.05
HMGXB3-204ENST00000513318 SPECC1Q5M775 1068 aa8.47□□□□□ -1.05
HMGXB3-204ENST00000513318 RESP18Q5W5W9 173 aa8.47□□□□□ -1.05
HMGXB3-204ENST00000513318 SHC4Q6S5L8 630 aa8.47□□□□□ -1.05
HMGXB3-204ENST00000513318 SLC39A5Q6ZMH5 540 aa8.47□□□□□ -1.05
HMGXB3-204ENST00000513318 OTUD6AQ7L8S5 288 aa8.47□□□□□ -1.05
HMGXB3-204ENST00000513318 SLC43A3Q8NBI5 491 aa8.47□□□□□ -1.05
HMGXB3-204ENST00000513318 RASSF8Q8NHQ8 419 aa8.47□□□□□ -1.05
HMGXB3-204ENST00000513318 EPSTI1Q96J88 318 aa8.47□□□□□ -1.05
HMGXB3-204ENST00000513318 NACC1Q96RE7 527 aa8.47□□□□□ -1.05
HMGXB3-204ENST00000513318 NPDC1Q9NQX5 325 aaPredicted RBP8.47□□□□□ -1.05
HMGXB3-204ENST00000513318 NRBP2Q9NSY0 501 aa8.47□□□□□ -1.05
HMGXB3-204ENST00000513318 ANKEF1Q9NU02 776 aa8.47□□□□□ -1.05
HMGXB3-204ENST00000513318 DDX19AQ9NUU7 478 aaKnown RBP8.47□□□□□ -1.05
HMGXB3-204ENST00000513318 FAM13BQ9NYF5 915 aa8.47□□□□□ -1.05
HMGXB3-204ENST00000513318 HDAC6Q9UBN7 1215 aa8.47□□□□□ -1.05
HMGXB3-204ENST00000513318 TRIP11Q15643 1979 aa8.46□□□□□ -1.05
HMGXB3-204ENST00000513318 CITO14578 2027 aa8.46□□□□□ -1.05
HMGXB3-204ENST00000513318 A0A1W2PQ27 194 aa8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 A0A1W2PQ64 194 aa8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 A0A1W2PQD8 194 aa8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 C17orf102A2RUQ5 167 aa8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 GOLGA6L4A6NEF3 574 aa8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 TLR3O15455 904 aaKnown RBP8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 STBD1O95210 358 aa8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 INSRRP14616 1297 aa8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 PLCG1P19174 1290 aa8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 CMA1P23946 247 aa8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 RARRES1P49788 294 aa8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 CDK7P50613 346 aa8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 ADAM17P78536 824 aa8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 TBC1D8BQ0IIM8 1120 aa8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 GRB10Q13322 594 aa8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 KARSQ15046 597 aaKnown RBP8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 ZRSR1Q15695 479 aaKnown RBP8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 GRIK4Q16099 956 aa8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 ECM1Q16610 540 aa8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 MTERF2Q49AM1 385 aa8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 XKR9Q5GH70 373 aa8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 ZNF484Q5JVG2 852 aa8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 CCDC73Q6ZRK6 1079 aa8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 USP49Q70CQ1 688 aa8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 ANO5Q75V66 913 aa8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 TRMT1LQ7Z2T5 733 aaKnown RBP8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 ANKRD33Q7Z3H0 272 aa8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 FAM126BQ8IXS8 530 aa8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 LMBR1Q8WVP7 490 aa8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 TOX2Q96NM4 488 aa8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 PYM1Q9BRP8 204 aaKnown RBP8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 HTATIP2Q9BUP3 242 aa8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 NIFKQ9BYG3 293 aaKnown RBP8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 CYP26B1Q9NR63 512 aa8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 STK17AQ9UEE5 414 aa8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 TUBE1Q9UJT0 475 aa8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 DBR1Q9UK59 544 aaKnown RBP8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 KIAA1024Q9UPX6 916 aa8.46□□□□□ -1.06
HMGXB3-204ENST00000513318 MBLAC1A4D2B0 266 aaPredicted RBP8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 TMEM150BA6NC51 233 aa8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 DDX11L8A8MPP1 907 aa8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 ZBTB42B2RXF5 422 aa8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 PPP1R3GB7ZBB8 358 aa8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 GOLGA6L22H0YM25 854 aa8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 TULP1O00294 542 aaPredicted RBP8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 MAGEB2O15479 319 aa8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 GAS2O43903 313 aaKnown RBP8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 B4GALT4O60513 344 aa8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 EYA4O95677 639 aa8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 RPLP2P05387 115 aaKnown RBP8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 STAT6P42226 847 aa8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 RTP1P59025 263 aa8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 IGBP1P78318 339 aa8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 LSM11P83369 360 aaKnown RBP eCLIP8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 TARBP2Q15633 366 aaKnown RBP8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 LRRC26Q2I0M4 334 aa8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 TRIM60Q495X7 471 aa8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 PLA2G4FQ68DD2 849 aa8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 GDF6Q6KF10 455 aaPredicted RBP8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 TAF2Q6P1X5 1199 aa8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 EXOC8Q8IYI6 725 aa8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 PDILTQ8N807 584 aa8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 PIGOQ8TEQ8 1089 aa8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 MRPS27Q92552 414 aaKnown RBP8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 LARP4BQ92615 738 aaKnown RBP8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 CEP170P1Q96L14 293 aa8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 PNMA5Q96PV4 448 aa8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 JPH2Q9BR39 696 aaPredicted RBP8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 CUEDC2Q9H467 287 aa8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 SETD4Q9NVD3 440 aa8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 DNM3Q9UQ16 869 aa8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 NOD1Q9Y239 953 aa8.45□□□□□ -1.06
HMGXB3-204ENST00000513318 FAM237AA0A1B0GTK4 181 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 A0A1B0GVL5 298 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 SMIM35A0A1B0GVV1 85 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 ARHGEF35A5YM69 484 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 DCDC2CA8MYV0 355 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 E9PMD0 336 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 GPR37O15354 613 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 TREHO43280 583 aa8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 PQBP1O60828 265 aaKnown RBP8.44□□□□□ -1.06
HMGXB3-204ENST00000513318 MAFO75444 373 aaPredicted RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms