RNA–Protein interactions for RNA: ENST00000513148.1

HMGCL-209, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,011 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-209ENST00000513148 FAM49AQ9H0Q0 323 aaPredicted RBP18.37■□□□□ 0.53
HMGCL-209ENST00000513148 KIAA1024Q9UPX6 916 aa18.37■□□□□ 0.53
HMGCL-209ENST00000513148 EVPLQ92817 2033 aa18.37■□□□□ 0.53
HMGCL-209ENST00000513148 LTBP2Q14767 1821 aa18.37■□□□□ 0.53
HMGCL-209ENST00000513148 MBLAC1A4D2B0 266 aaPredicted RBP18.37■□□□□ 0.53
HMGCL-209ENST00000513148 RBAK-RBAKDNI3L0D1 243 aa18.37■□□□□ 0.53
HMGCL-209ENST00000513148 C22orf31O95567 290 aa18.37■□□□□ 0.53
HMGCL-209ENST00000513148 CYP2C18P33260 490 aa18.37■□□□□ 0.53
HMGCL-209ENST00000513148 XKR9Q5GH70 373 aa18.37■□□□□ 0.53
HMGCL-209ENST00000513148 CABP7Q86V35 215 aa18.37■□□□□ 0.53
HMGCL-209ENST00000513148 METTL13Q8N6R0 699 aa18.37■□□□□ 0.53
HMGCL-209ENST00000513148 RASSF8Q8NHQ8 419 aa18.37■□□□□ 0.53
HMGCL-209ENST00000513148 AK8Q96MA6 479 aa18.37■□□□□ 0.53
HMGCL-209ENST00000513148 NOC4LQ9BVI4 516 aaKnown RBP18.37■□□□□ 0.53
HMGCL-209ENST00000513148 NIFKQ9BYG3 293 aaKnown RBP18.37■□□□□ 0.53
HMGCL-209ENST00000513148 CYP26B1Q9NR63 512 aa18.37■□□□□ 0.53
HMGCL-209ENST00000513148 DDX19AQ9NUU7 478 aaKnown RBP18.37■□□□□ 0.53
HMGCL-209ENST00000513148 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.37■□□□□ 0.53
HMGCL-209ENST00000513148 PDE4DIPQ5VU43 2346 aa18.37■□□□□ 0.53
HMGCL-209ENST00000513148 KIAA0355O15063 1070 aa18.36■□□□□ 0.53
HMGCL-209ENST00000513148 PRPF40AO75400 957 aaKnown RBP18.36■□□□□ 0.53
HMGCL-209ENST00000513148 THPOP40225 353 aa18.36■□□□□ 0.53
HMGCL-209ENST00000513148 UBA7P41226 1012 aa18.36■□□□□ 0.53
HMGCL-209ENST00000513148 ME1P48163 572 aa18.36■□□□□ 0.53
HMGCL-209ENST00000513148 TBC1D8BQ0IIM8 1120 aa18.36■□□□□ 0.53
HMGCL-209ENST00000513148 NOLC1Q14978 699 aaKnown RBP eCLIP18.36■□□□□ 0.53
HMGCL-209ENST00000513148 USP49Q70CQ1 688 aa18.36■□□□□ 0.53
HMGCL-209ENST00000513148 OTUD6AQ7L8S5 288 aa18.36■□□□□ 0.53
HMGCL-209ENST00000513148 KCNG4Q8TDN1 519 aa18.36■□□□□ 0.53
HMGCL-209ENST00000513148 EPSTI1Q96J88 318 aa18.36■□□□□ 0.53
HMGCL-209ENST00000513148 CDK5RAP3Q96JB5 506 aa18.36■□□□□ 0.53
HMGCL-209ENST00000513148 TMEM63CQ9P1W3 806 aa18.36■□□□□ 0.53
HMGCL-209ENST00000513148 STK24Q9Y6E0 443 aa18.36■□□□□ 0.53
HMGCL-209ENST00000513148 H0YGN5 161 aa18.35■□□□□ 0.53
HMGCL-209ENST00000513148 PPP6R2O75170 966 aa18.35■□□□□ 0.53
HMGCL-209ENST00000513148 LYPLA2O95372 231 aa18.35■□□□□ 0.53
HMGCL-209ENST00000513148 CTSHP09668 335 aa18.35■□□□□ 0.53
HMGCL-209ENST00000513148 CCL23P55773 120 aa18.35■□□□□ 0.53
HMGCL-209ENST00000513148 TARBP2Q15633 366 aaKnown RBP18.35■□□□□ 0.53
HMGCL-209ENST00000513148 LRRC71Q8N4P6 559 aa18.35■□□□□ 0.53
HMGCL-209ENST00000513148 DNAJB3Q8WWF6 145 aa18.35■□□□□ 0.53
HMGCL-209ENST00000513148 SYMPKQ92797 1274 aaKnown RBP18.35■□□□□ 0.53
HMGCL-209ENST00000513148 SPATA32Q96LK8 384 aa18.35■□□□□ 0.53
HMGCL-209ENST00000513148 TSPY26PQ9H489 355 aa18.35■□□□□ 0.53
HMGCL-209ENST00000513148 SUGCTQ9HAC7 445 aa18.35■□□□□ 0.53
HMGCL-209ENST00000513148 GDPD2Q9HCC8 539 aa18.35■□□□□ 0.53
HMGCL-209ENST00000513148 TANC1Q9C0D5 1861 aa18.35■□□□□ 0.53
HMGCL-209ENST00000513148 CLCN3P51790 818 aa18.35■□□□□ 0.53
HMGCL-209ENST00000513148 BFSP2Q13515 415 aa18.35■□□□□ 0.53
HMGCL-209ENST00000513148 TPRNQ4KMQ1 711 aa18.35■□□□□ 0.53
HMGCL-209ENST00000513148 CCDC155Q8N6L0 562 aa18.35■□□□□ 0.53
HMGCL-209ENST00000513148 LEO1Q8WVC0 666 aaPredicted RBP18.35■□□□□ 0.53
HMGCL-209ENST00000513148 NACC1Q96RE7 527 aa18.35■□□□□ 0.53
HMGCL-209ENST00000513148 KDM3AQ9Y4C1 1321 aa18.35■□□□□ 0.53
HMGCL-209ENST00000513148 TIMP1P01033 207 aa18.34■□□□□ 0.53
HMGCL-209ENST00000513148 PTMAP06454 111 aaKnown RBP18.34■□□□□ 0.53
HMGCL-209ENST00000513148 CKBP12277 381 aa18.34■□□□□ 0.53
HMGCL-209ENST00000513148 MDM2Q00987 491 aaPredicted RBP18.34■□□□□ 0.53
HMGCL-209ENST00000513148 TMEM62Q0P6H9 643 aa18.34■□□□□ 0.53
HMGCL-209ENST00000513148 KARSQ15046 597 aaKnown RBP18.34■□□□□ 0.53
HMGCL-209ENST00000513148 TAF2Q6P1X5 1199 aa18.34■□□□□ 0.53
HMGCL-209ENST00000513148 CAGE1Q8TC20 777 aa18.34■□□□□ 0.53
HMGCL-209ENST00000513148 BADQ92934 168 aa18.34■□□□□ 0.53
HMGCL-209ENST00000513148 SCLYQ96I15 445 aa18.34■□□□□ 0.53
HMGCL-209ENST00000513148 PPP1R16BQ96T49 567 aa18.34■□□□□ 0.53
HMGCL-209ENST00000513148 PCDHA2Q9Y5H9 948 aa18.34■□□□□ 0.53
HMGCL-209ENST00000513148 MORC2Q9Y6X9 1032 aaPredicted RBP18.34■□□□□ 0.53
HMGCL-209ENST00000513148 CEP290O15078 2479 aa18.34■□□□□ 0.53
HMGCL-209ENST00000513148 E9PMD0 336 aa18.33■□□□□ 0.53
HMGCL-209ENST00000513148 RARRES1P49788 294 aa18.33■□□□□ 0.53
HMGCL-209ENST00000513148 POLGP54098 1239 aaPredicted RBP18.33■□□□□ 0.53
HMGCL-209ENST00000513148 GRB10Q13322 594 aa18.33■□□□□ 0.53
HMGCL-209ENST00000513148 SYCP1Q15431 976 aa18.33■□□□□ 0.53
HMGCL-209ENST00000513148 TRIM71Q2Q1W2 868 aaKnown RBP18.33■□□□□ 0.53
HMGCL-209ENST00000513148 ZNF618Q5T7W0 954 aa18.33■□□□□ 0.53
HMGCL-209ENST00000513148 EFCAB12Q6NXP0 572 aa18.33■□□□□ 0.53
HMGCL-209ENST00000513148 KCNK18Q7Z418 384 aa18.33■□□□□ 0.53
HMGCL-209ENST00000513148 CALML4Q96GE6 196 aa18.33■□□□□ 0.53
HMGCL-209ENST00000513148 PNMA5Q96PV4 448 aa18.33■□□□□ 0.53
HMGCL-209ENST00000513148 CEP89Q96ST8 783 aa18.33■□□□□ 0.53
HMGCL-209ENST00000513148 WNT8AQ9H1J5 351 aa18.33■□□□□ 0.53
HMGCL-209ENST00000513148 ANKEF1Q9NU02 776 aa18.33■□□□□ 0.53
HMGCL-209ENST00000513148 PCDHA7Q9UN72 937 aa18.33■□□□□ 0.53
HMGCL-209ENST00000513148 SCN5AQ14524 2016 aa18.33■□□□□ 0.53
HMGCL-209ENST00000513148 TPM3P06753 285 aa18.33■□□□□ 0.52
HMGCL-209ENST00000513148 RETREG2Q8NC44 543 aa18.33■□□□□ 0.52
HMGCL-209ENST00000513148 SLC7A3Q8WY07 619 aa18.33■□□□□ 0.52
HMGCL-209ENST00000513148 ANKRD7Q92527 254 aa18.33■□□□□ 0.52
HMGCL-209ENST00000513148 BHMT2Q9H2M3 363 aa18.33■□□□□ 0.52
HMGCL-209ENST00000513148 RCOR1Q9UKL0 485 aa18.33■□□□□ 0.52
HMGCL-209ENST00000513148 LOXHD1Q8IVV2 1947 aa18.32■□□□□ 0.52
HMGCL-209ENST00000513148 PITPNM1O00562 1244 aa18.32■□□□□ 0.52
HMGCL-209ENST00000513148 MAGEB2O15479 319 aa18.32■□□□□ 0.52
HMGCL-209ENST00000513148 USO1O60763 962 aaKnown RBP18.32■□□□□ 0.52
HMGCL-209ENST00000513148 MUTP22033 750 aa18.32■□□□□ 0.52
HMGCL-209ENST00000513148 DRP2Q13474 957 aa18.32■□□□□ 0.52
HMGCL-209ENST00000513148 DNTTIP2Q5QJE6 756 aaKnown RBP18.32■□□□□ 0.52
HMGCL-209ENST00000513148 LBHD1Q9BQE6 289 aaPredicted RBP18.32■□□□□ 0.52
HMGCL-209ENST00000513148 NT5C3AQ9H0P0 336 aa18.32■□□□□ 0.52
HMGCL-209ENST00000513148 SIP14410 1827 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms