RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 ALDH1L1O75891 902 aa5.53□□□□□ -1.52
HTT-210ENST00000512909 PRPF6O94906 941 aaKnown RBP5.53□□□□□ -1.52
HTT-210ENST00000512909 MT-CO1P00395 513 aa5.53□□□□□ -1.52
HTT-210ENST00000512909 C8BP07358 591 aa5.53□□□□□ -1.52
HTT-210ENST00000512909 MTHFD2P13995 350 aa5.53□□□□□ -1.52
HTT-210ENST00000512909 POU3F3P20264 500 aaPredicted RBP5.53□□□□□ -1.52
HTT-210ENST00000512909 APEX1P27695 318 aaKnown RBP5.53□□□□□ -1.52
HTT-210ENST00000512909 MC3RP41968 323 aa5.53□□□□□ -1.52
HTT-210ENST00000512909 ECE1P42892 770 aa5.53□□□□□ -1.52
HTT-210ENST00000512909 BCAR1P56945 870 aa5.53□□□□□ -1.52
HTT-210ENST00000512909 NFATC3Q12968 1075 aa5.53□□□□□ -1.52
HTT-210ENST00000512909 KLF1Q13351 362 aaPredicted RBP5.53□□□□□ -1.52
HTT-210ENST00000512909 MTMR1Q13613 665 aa5.53□□□□□ -1.52
HTT-210ENST00000512909 SEC23AQ15436 765 aa5.53□□□□□ -1.52
HTT-210ENST00000512909 UGT8Q16880 541 aa5.53□□□□□ -1.52
HTT-210ENST00000512909 CR1LQ2VPA4 569 aa5.53□□□□□ -1.52
HTT-210ENST00000512909 FSTL4Q6MZW2 842 aa5.53□□□□□ -1.52
HTT-210ENST00000512909 TRMT10BQ6PF06 316 aaKnown RBP5.53□□□□□ -1.52
HTT-210ENST00000512909 OTOP2Q7RTS6 562 aa5.53□□□□□ -1.52
HTT-210ENST00000512909 STK32CQ86UX6 486 aa5.53□□□□□ -1.52
HTT-210ENST00000512909 CILP2Q8IUL8 1156 aa5.53□□□□□ -1.52
HTT-210ENST00000512909 KYQ8NBH2 561 aa5.53□□□□□ -1.52
HTT-210ENST00000512909 FOXB1Q99853 325 aa5.53□□□□□ -1.52
HTT-210ENST00000512909 PDGFDQ9GZP0 370 aaPredicted RBP5.53□□□□□ -1.52
HTT-210ENST00000512909 IRF2BPLQ9H1B7 796 aa5.53□□□□□ -1.52
HTT-210ENST00000512909 POFUT1Q9H488 388 aa5.53□□□□□ -1.52
HTT-210ENST00000512909 ZFP69BQ9UJL9 534 aa5.53□□□□□ -1.52
HTT-210ENST00000512909 PCDHA5Q9Y5H7 936 aa5.53□□□□□ -1.52
HTT-210ENST00000512909 EEA1Q15075 1411 aa5.53□□□□□ -1.52
HTT-210ENST00000512909 PRXQ9BXM0 1461 aa5.52□□□□□ -1.53
HTT-210ENST00000512909 MYOCOSA0A1B0GUC4 107 aa5.52□□□□□ -1.53
HTT-210ENST00000512909 BTBD11A6QL63 1104 aa5.52□□□□□ -1.53
HTT-210ENST00000512909 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.52□□□□□ -1.53
HTT-210ENST00000512909 MC4RP32245 332 aa5.52□□□□□ -1.53
HTT-210ENST00000512909 LIMS1P48059 325 aa5.52□□□□□ -1.53
HTT-210ENST00000512909 EPHB1P54762 984 aa5.52□□□□□ -1.53
HTT-210ENST00000512909 ALDH6A1Q02252 535 aaKnown RBP5.52□□□□□ -1.53
HTT-210ENST00000512909 SMAD4Q13485 552 aaKnown RBP5.52□□□□□ -1.53
HTT-210ENST00000512909 ABCB5Q2M3G0 1257 aa5.52□□□□□ -1.53
HTT-210ENST00000512909 ZNF385BQ569K4 471 aa5.52□□□□□ -1.53
HTT-210ENST00000512909 CREB3L3Q68CJ9 461 aa5.52□□□□□ -1.53
HTT-210ENST00000512909 CCDC62Q6P9F0 684 aa5.52□□□□□ -1.53
HTT-210ENST00000512909 CNKSR3Q6P9H4 555 aa5.52□□□□□ -1.53
HTT-210ENST00000512909 IFNL2Q8IZJ0 200 aa5.52□□□□□ -1.53
HTT-210ENST00000512909 C16orf92Q96LL3 132 aa5.52□□□□□ -1.53
HTT-210ENST00000512909 TACO1Q9BSH4 297 aaKnown RBP5.52□□□□□ -1.53
HTT-210ENST00000512909 MYL10Q9BUA6 226 aa5.52□□□□□ -1.53
HTT-210ENST00000512909 BTBD2Q9BX70 525 aa5.52□□□□□ -1.53
HTT-210ENST00000512909 CCDC8Q9H0W5 538 aaPredicted RBP5.52□□□□□ -1.53
HTT-210ENST00000512909 WNT8AQ9H1J5 351 aa5.52□□□□□ -1.53
HTT-210ENST00000512909 ZMAT4Q9H898 229 aa5.52□□□□□ -1.53
HTT-210ENST00000512909 L2HGDHQ9H9P8 463 aa5.52□□□□□ -1.53
HTT-210ENST00000512909 TOPORSQ9NS56 1045 aaPredicted RBP5.52□□□□□ -1.53
HTT-210ENST00000512909 DNAJC28Q9NX36 388 aa5.52□□□□□ -1.53
HTT-210ENST00000512909 HSPBP1Q9NZL4 362 aa5.52□□□□□ -1.53
HTT-210ENST00000512909 FBXO10Q9UK96 956 aa5.52□□□□□ -1.53
HTT-210ENST00000512909 RNF114Q9Y508 228 aa5.52□□□□□ -1.53
HTT-210ENST00000512909 DISP1Q96F81 1524 aa5.52□□□□□ -1.53
HTT-210ENST00000512909 ABCC10Q5T3U5 1492 aa5.51□□□□□ -1.53
HTT-210ENST00000512909 PLB1Q6P1J6 1458 aa5.51□□□□□ -1.53
HTT-210ENST00000512909 E2F8A0AVK6 867 aa5.51□□□□□ -1.53
HTT-210ENST00000512909 NRP2O60462 931 aa5.51□□□□□ -1.53
HTT-210ENST00000512909 NEK2P51955 445 aa5.51□□□□□ -1.53
HTT-210ENST00000512909 EPHB3P54753 998 aa5.51□□□□□ -1.53
HTT-210ENST00000512909 NRG3P56975 720 aa5.51□□□□□ -1.53
HTT-210ENST00000512909 TTF1Q15361 905 aaPredicted RBP5.51□□□□□ -1.53
HTT-210ENST00000512909 HSP90AB2PQ58FF8 381 aa5.51□□□□□ -1.53
HTT-210ENST00000512909 MCTP1Q6DN14 999 aa5.51□□□□□ -1.53
HTT-210ENST00000512909 KIAA1841Q6NSI8 718 aa5.51□□□□□ -1.53
HTT-210ENST00000512909 ESRP1Q6NXG1 681 aaKnown RBP5.51□□□□□ -1.53
HTT-210ENST00000512909 FAM180AQ6UWF9 173 aa5.51□□□□□ -1.53
HTT-210ENST00000512909 CXorf67Q86X51 503 aaPredicted RBP5.51□□□□□ -1.53
HTT-210ENST00000512909 TGFBRAP1Q8WUH2 860 aa5.51□□□□□ -1.53
HTT-210ENST00000512909 CHMP4CQ96CF2 233 aa5.51□□□□□ -1.53
HTT-210ENST00000512909 RAX2Q96IS3 184 aa5.51□□□□□ -1.53
HTT-210ENST00000512909 HIST1H2AHQ96KK5 128 aa5.51□□□□□ -1.53
HTT-210ENST00000512909 HIST1H2AJQ99878 128 aa5.51□□□□□ -1.53
HTT-210ENST00000512909 C11orf84Q9BUA3 381 aaPredicted RBP5.51□□□□□ -1.53
HTT-210ENST00000512909 KCNK12Q9HB15 430 aa5.51□□□□□ -1.53
HTT-210ENST00000512909 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.51□□□□□ -1.53
HTT-210ENST00000512909 FTSJ1Q9UET6 329 aa5.51□□□□□ -1.53
HTT-210ENST00000512909 USP18Q9UMW8 372 aa5.51□□□□□ -1.53
HTT-210ENST00000512909 INVSQ9Y283 1065 aa5.51□□□□□ -1.53
HTT-210ENST00000512909 ABCC2Q92887 1545 aa5.51□□□□□ -1.53
HTT-210ENST00000512909 ARID4BQ4LE39 1312 aaPredicted RBP5.5□□□□□ -1.53
HTT-210ENST00000512909 IRS2Q9Y4H2 1338 aa5.5□□□□□ -1.53
HTT-210ENST00000512909 ADCY10Q96PN6 1610 aa5.5□□□□□ -1.53
HTT-210ENST00000512909 H0Y858 1186 aa5.5□□□□□ -1.53
HTT-210ENST00000512909 ETV2O00321 342 aaPredicted RBP5.5□□□□□ -1.53
HTT-210ENST00000512909 PRLP01236 227 aa5.5□□□□□ -1.53
HTT-210ENST00000512909 CYP1A1P04798 512 aaPredicted RBP5.5□□□□□ -1.53
HTT-210ENST00000512909 CLEC2LP0C7M8 214 aa5.5□□□□□ -1.53
HTT-210ENST00000512909 ATF2P15336 505 aa5.5□□□□□ -1.53
HTT-210ENST00000512909 YBX3P16989 372 aaKnown RBP eCLIP5.5□□□□□ -1.53
HTT-210ENST00000512909 ITGA1P56199 1179 aa5.5□□□□□ -1.53
HTT-210ENST00000512909 SPIDRQ14159 915 aa5.5□□□□□ -1.53
HTT-210ENST00000512909 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.5□□□□□ -1.53
HTT-210ENST00000512909 ZNF568Q3ZCX4 644 aa5.5□□□□□ -1.53
HTT-210ENST00000512909 CT83Q5H943 113 aa5.5□□□□□ -1.53
HTT-210ENST00000512909 EFCAB2Q5VUJ9 269 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms