RNA–Protein interactions for RNA: ENST00000512756.5

COL11A1-210, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene COL11A1, Length 5,442 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-210ENST00000512756 DCLK2Q8N568 766 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 SKA2Q8WVK7 121 aaPredicted RBP13.37□□□□□ -0.27
COL11A1-210ENST00000512756 RUBCNQ92622 972 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 UTYO14607 1347 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 PLEKHG2Q9H7P9 1386 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 CYP2D6P10635 497 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 CASP1P29466 404 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 KCNB1Q14721 858 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 NAALADL2Q58DX5 795 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 WDR75Q8IWA0 830 aaKnown RBP13.37□□□□□ -0.27
COL11A1-210ENST00000512756 SYT2Q8N9I0 419 aaPredicted RBP13.37□□□□□ -0.27
COL11A1-210ENST00000512756 DHX38Q92620 1227 aaKnown RBP13.37□□□□□ -0.27
COL11A1-210ENST00000512756 FAM167AQ96KS9 214 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 NOP53Q9NZM5 478 aaKnown RBP13.37□□□□□ -0.27
COL11A1-210ENST00000512756 STRIP2Q9ULQ0 834 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 TTC26A0AVF1 554 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 FAM187AA6NFU0 413 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 KRT38O76015 456 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 PRR29P0C7W0 189 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 CHRNA3P32297 505 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 GGCXP38435 758 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 ATP2C1P98194 919 aaPredicted RBP13.37□□□□□ -0.27
COL11A1-210ENST00000512756 GFPT1Q06210 699 aaPredicted RBP13.37□□□□□ -0.27
COL11A1-210ENST00000512756 TXNRD1Q16881 649 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 ARHGAP27Q6ZUM4 889 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 PIGOQ8TEQ8 1089 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 ATP6V0A4Q9HBG4 840 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 ARAP3Q8WWN8 1544 aa13.37□□□□□ -0.27
COL11A1-210ENST00000512756 SFI1A8K8P3 1242 aa13.36□□□□□ -0.27
COL11A1-210ENST00000512756 WDR64B1ANS9 1081 aa13.36□□□□□ -0.27
COL11A1-210ENST00000512756 RSBN1LQ6PCB5 846 aaPredicted RBP13.36□□□□□ -0.27
COL11A1-210ENST00000512756 PADI6Q6TGC4 694 aa13.36□□□□□ -0.27
COL11A1-210ENST00000512756 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.36□□□□□ -0.27
COL11A1-210ENST00000512756 SLITRK6Q9H5Y7 841 aa13.36□□□□□ -0.27
COL11A1-210ENST00000512756 WDR91A4D1P6 747 aa13.36□□□□□ -0.27
COL11A1-210ENST00000512756 MYO1CO00159 1063 aa13.36□□□□□ -0.27
COL11A1-210ENST00000512756 PRDX5P30044 214 aa13.36□□□□□ -0.27
COL11A1-210ENST00000512756 KLHL38Q2WGJ6 581 aa13.36□□□□□ -0.27
COL11A1-210ENST00000512756 SHC4Q6S5L8 630 aa13.36□□□□□ -0.27
COL11A1-210ENST00000512756 VPS39Q96JC1 886 aa13.36□□□□□ -0.27
COL11A1-210ENST00000512756 TMEM60Q9H2L4 133 aa13.36□□□□□ -0.27
COL11A1-210ENST00000512756 MRFAP1Q9Y605 127 aa13.36□□□□□ -0.27
COL11A1-210ENST00000512756 PNPLA7Q6ZV29 1317 aa13.36□□□□□ -0.27
COL11A1-210ENST00000512756 TARSL2A2RTX5 802 aaKnown RBP13.36□□□□□ -0.27
COL11A1-210ENST00000512756 E9PMD0 336 aa13.36□□□□□ -0.27
COL11A1-210ENST00000512756 COPEO14579 308 aa13.36□□□□□ -0.27
COL11A1-210ENST00000512756 GNGT2O14610 69 aa13.36□□□□□ -0.27
COL11A1-210ENST00000512756 ORC4O43929 436 aa13.36□□□□□ -0.27
COL11A1-210ENST00000512756 GH2P01242 217 aa13.36□□□□□ -0.27
COL11A1-210ENST00000512756 KRT10P13645 584 aa13.36□□□□□ -0.27
COL11A1-210ENST00000512756 KRT76Q01546 638 aa13.36□□□□□ -0.27
COL11A1-210ENST00000512756 RCSD1Q6JBY9 416 aa13.36□□□□□ -0.27
COL11A1-210ENST00000512756 KLC3Q6P597 504 aa13.36□□□□□ -0.27
COL11A1-210ENST00000512756 ZNF449Q6P9G9 518 aa13.36□□□□□ -0.27
COL11A1-210ENST00000512756 MMS22LQ6ZRQ5 1243 aa13.36□□□□□ -0.27
COL11A1-210ENST00000512756 ISCA1Q9BUE6 129 aa13.36□□□□□ -0.27
COL11A1-210ENST00000512756 NBPF3Q9H094 633 aa13.36□□□□□ -0.27
COL11A1-210ENST00000512756 TBC1D1Q86TI0 1168 aaPredicted RBP13.36□□□□□ -0.27
COL11A1-210ENST00000512756 MAML1Q92585 1016 aa13.36□□□□□ -0.27
COL11A1-210ENST00000512756 FAF2Q96CS3 445 aa13.36□□□□□ -0.27
COL11A1-210ENST00000512756 BEGAINQ9BUH8 593 aa13.36□□□□□ -0.27
COL11A1-210ENST00000512756 DONSONQ9NYP3 566 aa13.36□□□□□ -0.27
COL11A1-210ENST00000512756 TRPM1Q7Z4N2 1603 aa13.36□□□□□ -0.27
COL11A1-210ENST00000512756 ABCC3O15438 1527 aa13.36□□□□□ -0.27
COL11A1-210ENST00000512756 PFASO15067 1338 aa13.35□□□□□ -0.27
COL11A1-210ENST00000512756 RASA4BC9J798 803 aa13.35□□□□□ -0.27
COL11A1-210ENST00000512756 RASA4O43374 803 aa13.35□□□□□ -0.27
COL11A1-210ENST00000512756 ZSCAN20P17040 1043 aaPredicted RBP13.35□□□□□ -0.27
COL11A1-210ENST00000512756 DEUP1Q05D60 604 aa13.35□□□□□ -0.27
COL11A1-210ENST00000512756 MTMR1Q13613 665 aa13.35□□□□□ -0.27
COL11A1-210ENST00000512756 RTKN2Q8IZC4 609 aa13.35□□□□□ -0.27
COL11A1-210ENST00000512756 GIMAP8Q8ND71 665 aaPredicted RBP13.35□□□□□ -0.27
COL11A1-210ENST00000512756 SRP68Q9UHB9 627 aaKnown RBP13.35□□□□□ -0.27
COL11A1-210ENST00000512756 USP42Q9H9J4 1324 aaKnown RBP13.35□□□□□ -0.27
COL11A1-210ENST00000512756 GSG1L2A8MUP6 293 aa13.35□□□□□ -0.27
COL11A1-210ENST00000512756 CTIFO43310 598 aaKnown RBP13.35□□□□□ -0.27
COL11A1-210ENST00000512756 NCF2P19878 526 aaPredicted RBP13.35□□□□□ -0.27
COL11A1-210ENST00000512756 PMS2P54278 862 aa13.35□□□□□ -0.27
COL11A1-210ENST00000512756 OSTNP61366 133 aa13.35□□□□□ -0.27
COL11A1-210ENST00000512756 ZC3H15Q8WU90 426 aaKnown RBP13.35□□□□□ -0.27
COL11A1-210ENST00000512756 TRAIPQ9BWF2 469 aa13.35□□□□□ -0.27
COL11A1-210ENST00000512756 TAF1DQ9H5J8 278 aaPredicted RBP13.35□□□□□ -0.27
COL11A1-210ENST00000512756 ZWILCHQ9H900 591 aa13.35□□□□□ -0.27
COL11A1-210ENST00000512756 IQGAP3Q86VI3 1631 aa13.35□□□□□ -0.27
COL11A1-210ENST00000512756 FRMD3A2A2Y4 597 aa13.35□□□□□ -0.27
COL11A1-210ENST00000512756 GMNCA6NCL1 334 aa13.35□□□□□ -0.27
COL11A1-210ENST00000512756 TEX33O43247 280 aa13.35□□□□□ -0.27
COL11A1-210ENST00000512756 PPP2R2AP63151 447 aa13.35□□□□□ -0.27
COL11A1-210ENST00000512756 PHEXP78562 749 aa13.35□□□□□ -0.27
COL11A1-210ENST00000512756 TAF1BQ53T94 588 aaPredicted RBP13.35□□□□□ -0.27
COL11A1-210ENST00000512756 SCARA5Q6ZMJ2 495 aa13.35□□□□□ -0.27
COL11A1-210ENST00000512756 MASTLQ96GX5 879 aa13.35□□□□□ -0.27
COL11A1-210ENST00000512756 UPF3AQ9H1J1 476 aaKnown RBP13.35□□□□□ -0.27
COL11A1-210ENST00000512756 ASNSD1Q9NWL6 643 aa13.35□□□□□ -0.27
COL11A1-210ENST00000512756 FEM1BQ9UK73 627 aa13.35□□□□□ -0.27
COL11A1-210ENST00000512756 CAPN11Q9UMQ6 739 aa13.35□□□□□ -0.27
COL11A1-210ENST00000512756 CHUKO15111 745 aa13.35□□□□□ -0.27
COL11A1-210ENST00000512756 GGPS1O95749 300 aa13.35□□□□□ -0.27
COL11A1-210ENST00000512756 SRGAP2CP0DJJ0 459 aa13.35□□□□□ -0.27
COL11A1-210ENST00000512756 MX2P20592 715 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms