RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 ZNF689Q96CS4 500 aaPredicted RBP13.58□□□□□ -0.24
CDK7-208ENST00000512687 C22orf23Q9BZE7 217 aa13.58□□□□□ -0.24
CDK7-208ENST00000512687 ERVK-5Q9HDB9 667 aa13.58□□□□□ -0.24
CDK7-208ENST00000512687 ORC3Q9UBD5 711 aaPredicted RBP13.58□□□□□ -0.24
CDK7-208ENST00000512687 TCEAL9Q9UHQ7 104 aa13.58□□□□□ -0.24
CDK7-208ENST00000512687 NOC2LQ9Y3T9 749 aaKnown RBP13.58□□□□□ -0.24
CDK7-208ENST00000512687 SQORQ9Y6N5 450 aa13.58□□□□□ -0.24
CDK7-208ENST00000512687 TTC28Q96AY4 2481 aa13.58□□□□□ -0.24
CDK7-208ENST00000512687 ADGRA3Q8IWK6 1321 aa13.58□□□□□ -0.24
CDK7-208ENST00000512687 TMEM150BA6NC51 233 aa13.57□□□□□ -0.24
CDK7-208ENST00000512687 VTNP04004 478 aa13.57□□□□□ -0.24
CDK7-208ENST00000512687 OATP04181 439 aa13.57□□□□□ -0.24
CDK7-208ENST00000512687 PAK2Q13177 524 aa13.57□□□□□ -0.24
CDK7-208ENST00000512687 ANKRD1Q15327 319 aa13.57□□□□□ -0.24
CDK7-208ENST00000512687 SKIV2LQ15477 1246 aaKnown RBP13.57□□□□□ -0.24
CDK7-208ENST00000512687 KIZQ2M2Z5 673 aa13.57□□□□□ -0.24
CDK7-208ENST00000512687 NME8Q8N427 588 aa13.57□□□□□ -0.24
CDK7-208ENST00000512687 NSUN7Q8NE18 718 aaKnown RBP13.57□□□□□ -0.24
CDK7-208ENST00000512687 ASB2Q96Q27 587 aa13.57□□□□□ -0.24
CDK7-208ENST00000512687 PHF12Q96QT6 1004 aa13.57□□□□□ -0.24
CDK7-208ENST00000512687 DDX25Q9UHL0 483 aaKnown RBP13.57□□□□□ -0.24
CDK7-208ENST00000512687 GINS2Q9Y248 185 aa13.57□□□□□ -0.24
CDK7-208ENST00000512687 JAK2O60674 1132 aa13.56□□□□□ -0.24
CDK7-208ENST00000512687 GPR32O75388 356 aa13.56□□□□□ -0.24
CDK7-208ENST00000512687 STBD1O95210 358 aa13.56□□□□□ -0.24
CDK7-208ENST00000512687 GATMP50440 423 aa13.56□□□□□ -0.24
CDK7-208ENST00000512687 NEK4P51957 841 aa13.56□□□□□ -0.24
CDK7-208ENST00000512687 JAK3P52333 1124 aa13.56□□□□□ -0.24
CDK7-208ENST00000512687 MRPS5P82675 430 aaKnown RBP13.56□□□□□ -0.24
CDK7-208ENST00000512687 LETM2Q2VYF4 491 aa13.56□□□□□ -0.24
CDK7-208ENST00000512687 PIK3AP1Q6ZUJ8 805 aa13.56□□□□□ -0.24
CDK7-208ENST00000512687 MIER3Q7Z3K6 550 aa13.56□□□□□ -0.24
CDK7-208ENST00000512687 FAM228AQ86W67 206 aa13.56□□□□□ -0.24
CDK7-208ENST00000512687 TMEM192Q8IY95 271 aa13.56□□□□□ -0.24
CDK7-208ENST00000512687 LRRC71Q8N4P6 559 aa13.56□□□□□ -0.24
CDK7-208ENST00000512687 TNFRSF25Q93038 417 aa13.56□□□□□ -0.24
CDK7-208ENST00000512687 FAM167AQ96KS9 214 aa13.56□□□□□ -0.24
CDK7-208ENST00000512687 CEP89Q96ST8 783 aa13.56□□□□□ -0.24
CDK7-208ENST00000512687 OSMRQ99650 979 aa13.56□□□□□ -0.24
CDK7-208ENST00000512687 KCNMB3Q9NPA1 279 aa13.56□□□□□ -0.24
CDK7-208ENST00000512687 LMCD1Q9NZU5 365 aa13.56□□□□□ -0.24
CDK7-208ENST00000512687 NCOR1O75376 2440 aa13.56□□□□□ -0.24
CDK7-208ENST00000512687 CCDC194A0A1B0GVG4 234 aa13.55□□□□□ -0.24
CDK7-208ENST00000512687 EML1O00423 815 aa13.55□□□□□ -0.24
CDK7-208ENST00000512687 DGKIO75912 1065 aa13.55□□□□□ -0.24
CDK7-208ENST00000512687 SFNP31947 248 aa13.55□□□□□ -0.24
CDK7-208ENST00000512687 KCNQ1P51787 676 aa13.55□□□□□ -0.24
CDK7-208ENST00000512687 FOSBP53539 338 aa13.55□□□□□ -0.24
CDK7-208ENST00000512687 NFX1Q12986 1120 aaKnown RBP13.55□□□□□ -0.24
CDK7-208ENST00000512687 NR5A1Q13285 461 aa13.55□□□□□ -0.24
CDK7-208ENST00000512687 TARBP2Q15633 366 aaKnown RBP13.55□□□□□ -0.24
CDK7-208ENST00000512687 C8orf34Q49A92 452 aa13.55□□□□□ -0.24
CDK7-208ENST00000512687 EFCAB12Q6NXP0 572 aa13.55□□□□□ -0.24
CDK7-208ENST00000512687 NEK8Q86SG6 692 aa13.55□□□□□ -0.24
CDK7-208ENST00000512687 FIBCD1Q8N539 461 aa13.55□□□□□ -0.24
CDK7-208ENST00000512687 METTL13Q8N6R0 699 aa13.55□□□□□ -0.24
CDK7-208ENST00000512687 RDM1Q8NG50 284 aa13.55□□□□□ -0.24
CDK7-208ENST00000512687 ZNF668Q96K58 619 aaPredicted RBP13.55□□□□□ -0.24
CDK7-208ENST00000512687 SAMD11Q96NU1 681 aa13.55□□□□□ -0.24
CDK7-208ENST00000512687 FTHL17Q9BXU8 183 aa13.55□□□□□ -0.24
CDK7-208ENST00000512687 VAV3Q9UKW4 847 aa13.55□□□□□ -0.24
CDK7-208ENST00000512687 H3BNC9 293 aa13.54□□□□□ -0.24
CDK7-208ENST00000512687 WNT7AO00755 349 aa13.54□□□□□ -0.24
CDK7-208ENST00000512687 RPS6KA5O75582 802 aa13.54□□□□□ -0.24
CDK7-208ENST00000512687 CTNNB1P35222 781 aa13.54□□□□□ -0.24
CDK7-208ENST00000512687 CRYBB1P53674 252 aaPredicted RBP13.54□□□□□ -0.24
CDK7-208ENST00000512687 DRP2Q13474 957 aa13.54□□□□□ -0.24
CDK7-208ENST00000512687 GPM6BQ13491 265 aa13.54□□□□□ -0.24
CDK7-208ENST00000512687 PAN2Q504Q3 1202 aaKnown RBP13.54□□□□□ -0.24
CDK7-208ENST00000512687 NPAS4Q8IUM7 802 aa13.54□□□□□ -0.24
CDK7-208ENST00000512687 BANK1Q8NDB2 785 aa13.54□□□□□ -0.24
CDK7-208ENST00000512687 SYMPKQ92797 1274 aaKnown RBP13.54□□□□□ -0.24
CDK7-208ENST00000512687 HAS1Q92839 578 aa13.54□□□□□ -0.24
CDK7-208ENST00000512687 CLP1Q92989 425 aaKnown RBP13.54□□□□□ -0.24
CDK7-208ENST00000512687 SH2D3AQ9BRG2 576 aa13.54□□□□□ -0.24
CDK7-208ENST00000512687 ADAMTS10Q9H324 1103 aa13.54□□□□□ -0.24
CDK7-208ENST00000512687 SEPT9Q9UHD8 586 aaPredicted RBP13.54□□□□□ -0.24
CDK7-208ENST00000512687 ST3GAL5Q9UNP4 418 aa13.54□□□□□ -0.24
CDK7-208ENST00000512687 CEP131Q9UPN4 1083 aa13.54□□□□□ -0.24
CDK7-208ENST00000512687 MRPL42Q9Y6G3 142 aaKnown RBP13.54□□□□□ -0.24
CDK7-208ENST00000512687 C5orf67F2Z3F1 127 aa13.53□□□□□ -0.24
CDK7-208ENST00000512687 MAGEB2O15479 319 aa13.53□□□□□ -0.24
CDK7-208ENST00000512687 CCNT1O60563 726 aaKnown RBP13.53□□□□□ -0.24
CDK7-208ENST00000512687 BMP1P13497 986 aa13.53□□□□□ -0.24
CDK7-208ENST00000512687 XBP1P17861 261 aa13.53□□□□□ -0.24
CDK7-208ENST00000512687 IBSPP21815 317 aaPredicted RBP13.53□□□□□ -0.24
CDK7-208ENST00000512687 KRT2P35908 639 aa13.53□□□□□ -0.24
CDK7-208ENST00000512687 SARSP49591 514 aaKnown RBP13.53□□□□□ -0.24
CDK7-208ENST00000512687 NLRP11P59045 1033 aaKnown RBP13.53□□□□□ -0.24
CDK7-208ENST00000512687 PPP2R5CQ13362 524 aa13.53□□□□□ -0.24
CDK7-208ENST00000512687 BTG3Q14201 252 aaPredicted RBP13.53□□□□□ -0.24
CDK7-208ENST00000512687 DSC3Q14574 896 aa13.53□□□□□ -0.24
CDK7-208ENST00000512687 MTERF2Q49AM1 385 aa13.53□□□□□ -0.24
CDK7-208ENST00000512687 PPP4R3AQ6IN85 833 aa13.53□□□□□ -0.24
CDK7-208ENST00000512687 ADAMTS19Q8TE59 1207 aa13.53□□□□□ -0.24
CDK7-208ENST00000512687 WASF1Q92558 559 aa13.53□□□□□ -0.24
CDK7-208ENST00000512687 MRPL38Q96DV4 380 aaKnown RBP13.53□□□□□ -0.24
CDK7-208ENST00000512687 NECAB3Q96P71 396 aaPredicted RBP13.53□□□□□ -0.24
CDK7-208ENST00000512687 KIF2CQ99661 725 aa13.53□□□□□ -0.24
CDK7-208ENST00000512687 ADAM2Q99965 735 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms