RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 C11orf84Q9BUA3 381 aaPredicted RBP17.28■□□□□ 0.36
COL1A1-213ENST00000511732 PHF20Q9BVI0 1012 aa17.28■□□□□ 0.36
COL1A1-213ENST00000511732 SLKQ9H2G2 1235 aaPredicted RBP17.28■□□□□ 0.36
COL1A1-213ENST00000511732 NSUN3Q9H649 340 aaKnown RBP17.28■□□□□ 0.36
COL1A1-213ENST00000511732 ALG13Q9NP73 1137 aaKnown RBP17.28■□□□□ 0.36
COL1A1-213ENST00000511732 RGS18Q9NS28 235 aa17.28■□□□□ 0.36
COL1A1-213ENST00000511732 BRWD1Q9NSI6 2320 aa17.27■□□□□ 0.36
COL1A1-213ENST00000511732 STK36Q9NRP7 1315 aa17.27■□□□□ 0.36
COL1A1-213ENST00000511732 TMEM150BA6NC51 233 aa17.27■□□□□ 0.36
COL1A1-213ENST00000511732 C9IYK1 514 aa17.27■□□□□ 0.36
COL1A1-213ENST00000511732 MAGEB2O15479 319 aa17.27■□□□□ 0.36
COL1A1-213ENST00000511732 SLC37A4O43826 429 aa17.27■□□□□ 0.36
COL1A1-213ENST00000511732 STBD1O95210 358 aa17.27■□□□□ 0.36
COL1A1-213ENST00000511732 STAG3L1P0CL83 205 aa17.27■□□□□ 0.36
COL1A1-213ENST00000511732 JAK3P52333 1124 aa17.27■□□□□ 0.36
COL1A1-213ENST00000511732 AK2P54819 239 aa17.27■□□□□ 0.36
COL1A1-213ENST00000511732 NLRP11P59045 1033 aaKnown RBP17.27■□□□□ 0.36
COL1A1-213ENST00000511732 COL19A1Q14993 1142 aa17.27■□□□□ 0.36
COL1A1-213ENST00000511732 NONOQ15233 471 aaKnown RBP eCLIP17.27■□□□□ 0.36
COL1A1-213ENST00000511732 MOXD1Q6UVY6 613 aa17.27■□□□□ 0.36
COL1A1-213ENST00000511732 FAM177A1Q8N128 213 aaPredicted RBP17.27■□□□□ 0.36
COL1A1-213ENST00000511732 NEK9Q8TD19 979 aa17.27■□□□□ 0.36
COL1A1-213ENST00000511732 ZNF668Q96K58 619 aaPredicted RBP17.27■□□□□ 0.36
COL1A1-213ENST00000511732 PLVAPQ9BX97 442 aa17.27■□□□□ 0.36
COL1A1-213ENST00000511732 LMAN2LQ9H0V9 348 aa17.27■□□□□ 0.36
COL1A1-213ENST00000511732 ADAMTS10Q9H324 1103 aa17.27■□□□□ 0.36
COL1A1-213ENST00000511732 NRBP2Q9NSY0 501 aa17.27■□□□□ 0.36
COL1A1-213ENST00000511732 PLAGL2Q9UPG8 496 aa17.27■□□□□ 0.36
COL1A1-213ENST00000511732 PLXNA4Q9HCM2 1894 aa17.27■□□□□ 0.35
COL1A1-213ENST00000511732 GPR182O15218 404 aa17.26■□□□□ 0.35
COL1A1-213ENST00000511732 CSPG5O95196 566 aa17.26■□□□□ 0.35
COL1A1-213ENST00000511732 IL9P15248 144 aa17.26■□□□□ 0.35
COL1A1-213ENST00000511732 DNAJB1P25685 340 aa17.26■□□□□ 0.35
COL1A1-213ENST00000511732 ANAPC15P60006 121 aa17.26■□□□□ 0.35
COL1A1-213ENST00000511732 DRP2Q13474 957 aa17.26■□□□□ 0.35
COL1A1-213ENST00000511732 DSC3Q14574 896 aa17.26■□□□□ 0.35
COL1A1-213ENST00000511732 TARBP2Q15633 366 aaKnown RBP17.26■□□□□ 0.35
COL1A1-213ENST00000511732 FAM102BQ5T8I3 360 aa17.26■□□□□ 0.35
COL1A1-213ENST00000511732 MIER3Q7Z3K6 550 aa17.26■□□□□ 0.35
COL1A1-213ENST00000511732 KRT25Q7Z3Z0 450 aa17.26■□□□□ 0.35
COL1A1-213ENST00000511732 OXER1Q8TDS5 423 aa17.26■□□□□ 0.35
COL1A1-213ENST00000511732 PABPC5Q96DU9 382 aaKnown RBP17.26■□□□□ 0.35
COL1A1-213ENST00000511732 CEP89Q96ST8 783 aa17.26■□□□□ 0.35
COL1A1-213ENST00000511732 SH2D3AQ9BRG2 576 aa17.26■□□□□ 0.35
COL1A1-213ENST00000511732 CD320Q9NPF0 282 aa17.26■□□□□ 0.35
COL1A1-213ENST00000511732 LRFN2Q9ULH4 789 aa17.26■□□□□ 0.35
COL1A1-213ENST00000511732 AKT3Q9Y243 479 aa17.26■□□□□ 0.35
COL1A1-213ENST00000511732 PCDHB7Q9Y5E2 793 aa17.26■□□□□ 0.35
COL1A1-213ENST00000511732 DENND3A2RUS2 1198 aa17.25■□□□□ 0.35
COL1A1-213ENST00000511732 H3BQ06 376 aaPredicted RBP17.25■□□□□ 0.35
COL1A1-213ENST00000511732 CDKL5O76039 1030 aa17.25■□□□□ 0.35
COL1A1-213ENST00000511732 LARGE1O95461 756 aa17.25■□□□□ 0.35
COL1A1-213ENST00000511732 MMP1P03956 469 aa17.25■□□□□ 0.35
COL1A1-213ENST00000511732 ITGB1P05556 798 aa17.25■□□□□ 0.35
COL1A1-213ENST00000511732 LTBRP36941 435 aa17.25■□□□□ 0.35
COL1A1-213ENST00000511732 LETM2Q2VYF4 491 aa17.25■□□□□ 0.35
COL1A1-213ENST00000511732 EARS2Q5JPH6 523 aaKnown RBP17.25■□□□□ 0.35
COL1A1-213ENST00000511732 ERICH6BQ5W0A0 696 aa17.25■□□□□ 0.35
COL1A1-213ENST00000511732 SLC24A5Q71RS6 500 aa17.25■□□□□ 0.35
COL1A1-213ENST00000511732 RDM1Q8NG50 284 aa17.25■□□□□ 0.35
COL1A1-213ENST00000511732 SPPL3Q8TCT6 385 aa17.25■□□□□ 0.35
COL1A1-213ENST00000511732 KHSRPQ92945 711 aaKnown RBP eCLIP17.25■□□□□ 0.35
COL1A1-213ENST00000511732 P2RX5Q93086 422 aa17.25■□□□□ 0.35
COL1A1-213ENST00000511732 C1orf112Q9NSG2 853 aa17.25■□□□□ 0.35
COL1A1-213ENST00000511732 HCSTQ9UBK5 93 aa17.25■□□□□ 0.35
COL1A1-213ENST00000511732 DDX25Q9UHL0 483 aaKnown RBP17.25■□□□□ 0.35
COL1A1-213ENST00000511732 MYO7AQ13402 2215 aa17.25■□□□□ 0.35
COL1A1-213ENST00000511732 EML1O00423 815 aa17.24■□□□□ 0.35
COL1A1-213ENST00000511732 FDPSP14324 419 aaKnown RBP17.24■□□□□ 0.35
COL1A1-213ENST00000511732 GTF2F1P35269 517 aaKnown RBP eCLIP17.24■□□□□ 0.35
COL1A1-213ENST00000511732 GPC3P51654 580 aa17.24■□□□□ 0.35
COL1A1-213ENST00000511732 FAM189BP81408 668 aa17.24■□□□□ 0.35
COL1A1-213ENST00000511732 HYAL1Q12794 435 aa17.24■□□□□ 0.35
COL1A1-213ENST00000511732 ME3Q16798 604 aa17.24■□□□□ 0.35
COL1A1-213ENST00000511732 MTERF2Q49AM1 385 aa17.24■□□□□ 0.35
COL1A1-213ENST00000511732 ODR4Q5SWX8 454 aa17.24■□□□□ 0.35
COL1A1-213ENST00000511732 NECAB1Q8N987 351 aa17.24■□□□□ 0.35
COL1A1-213ENST00000511732 KLHL23Q8NBE8 558 aa17.24■□□□□ 0.35
COL1A1-213ENST00000511732 MAP7D2Q96T17 732 aa17.24■□□□□ 0.35
COL1A1-213ENST00000511732 NIFKQ9BYG3 293 aaKnown RBP17.24■□□□□ 0.35
COL1A1-213ENST00000511732 KCNMB3Q9NPA1 279 aa17.24■□□□□ 0.35
COL1A1-213ENST00000511732 SEPT9Q9UHD8 586 aaPredicted RBP17.24■□□□□ 0.35
COL1A1-213ENST00000511732 GRXCR2A6NFK2 248 aa17.23■□□□□ 0.35
COL1A1-213ENST00000511732 SEC24BO95487 1268 aa17.23■□□□□ 0.35
COL1A1-213ENST00000511732 FGFR1P11362 822 aa17.23■□□□□ 0.35
COL1A1-213ENST00000511732 EIF4BP23588 611 aaKnown RBP17.23■□□□□ 0.35
COL1A1-213ENST00000511732 TMOD1P28289 359 aa17.23■□□□□ 0.35
COL1A1-213ENST00000511732 IRS1P35568 1242 aa17.23■□□□□ 0.35
COL1A1-213ENST00000511732 DLX2Q07687 328 aaPredicted RBP17.23■□□□□ 0.35
COL1A1-213ENST00000511732 TBC1D8BQ0IIM8 1120 aa17.23■□□□□ 0.35
COL1A1-213ENST00000511732 CTC1Q2NKJ3 1217 aa17.23■□□□□ 0.35
COL1A1-213ENST00000511732 XKR3Q5GH77 459 aa17.23■□□□□ 0.35
COL1A1-213ENST00000511732 PTCRAQ6ISU1 281 aaPredicted RBP17.23■□□□□ 0.35
COL1A1-213ENST00000511732 FAM43BQ6ZT52 329 aaPredicted RBP17.23■□□□□ 0.35
COL1A1-213ENST00000511732 EP400NLQ6ZTU2 488 aa17.23■□□□□ 0.35
COL1A1-213ENST00000511732 PIK3AP1Q6ZUJ8 805 aa17.23■□□□□ 0.35
COL1A1-213ENST00000511732 NEK8Q86SG6 692 aa17.23■□□□□ 0.35
COL1A1-213ENST00000511732 EPHX3Q9H6B9 360 aa17.23■□□□□ 0.35
COL1A1-213ENST00000511732 CLDND1Q9NY35 253 aa17.23■□□□□ 0.35
COL1A1-213ENST00000511732 ORC3Q9UBD5 711 aaPredicted RBP17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms