RNA–Protein interactions for RNA: ENST00000511604.5

CPNE4-208, Transcript of copine 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE4, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-208ENST00000511604 SERPINB7O75635 380 aa7.9□□□□□ -1.14
CPNE4-208ENST00000511604 TXKP42681 527 aa7.9□□□□□ -1.14
CPNE4-208ENST00000511604 RFX5P48382 616 aaPredicted RBP7.9□□□□□ -1.14
CPNE4-208ENST00000511604 ERVK-9P63128 1117 aa7.9□□□□□ -1.14
CPNE4-208ENST00000511604 CUL1Q13616 776 aa7.9□□□□□ -1.14
CPNE4-208ENST00000511604 CYLC2Q14093 348 aaPredicted RBP7.9□□□□□ -1.14
CPNE4-208ENST00000511604 KCNJ12Q14500 433 aa7.9□□□□□ -1.14
CPNE4-208ENST00000511604 CCDC6Q16204 474 aa7.9□□□□□ -1.14
CPNE4-208ENST00000511604 NTRK3Q16288 839 aa7.9□□□□□ -1.14
CPNE4-208ENST00000511604 CCDC153Q494R4 210 aa7.9□□□□□ -1.14
CPNE4-208ENST00000511604 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.9□□□□□ -1.14
CPNE4-208ENST00000511604 TCP11X2Q5H9J9 407 aa7.9□□□□□ -1.14
CPNE4-208ENST00000511604 ARHGAP27Q6ZUM4 889 aa7.9□□□□□ -1.14
CPNE4-208ENST00000511604 FAM47EQ6ZV65 393 aa7.9□□□□□ -1.14
CPNE4-208ENST00000511604 AGGF1Q8N302 714 aaeCLIP7.9□□□□□ -1.14
CPNE4-208ENST00000511604 SYT2Q8N9I0 419 aaPredicted RBP7.9□□□□□ -1.14
CPNE4-208ENST00000511604 CFAP61Q8NHU2 1237 aa7.9□□□□□ -1.14
CPNE4-208ENST00000511604 TBC1D16Q8TBP0 767 aa7.9□□□□□ -1.14
CPNE4-208ENST00000511604 NEUROD6Q96NK8 337 aa7.9□□□□□ -1.14
CPNE4-208ENST00000511604 DSCC1Q9BVC3 393 aa7.9□□□□□ -1.14
CPNE4-208ENST00000511604 TLR10Q9BXR5 811 aa7.9□□□□□ -1.14
CPNE4-208ENST00000511604 TXLNGQ9NUQ3 528 aa7.9□□□□□ -1.14
CPNE4-208ENST00000511604 FAIMQ9NVQ4 179 aa7.9□□□□□ -1.14
CPNE4-208ENST00000511604 PTTG2Q9NZH5 202 aa7.9□□□□□ -1.14
CPNE4-208ENST00000511604 IL1RAPL1Q9NZN1 696 aa7.9□□□□□ -1.14
CPNE4-208ENST00000511604 CAPN11Q9UMQ6 739 aa7.9□□□□□ -1.14
CPNE4-208ENST00000511604 ARL2BPQ9Y2Y0 163 aa7.9□□□□□ -1.14
CPNE4-208ENST00000511604 MST1RQ04912 1400 aa7.9□□□□□ -1.14
CPNE4-208ENST00000511604 ACEP12821 1306 aa7.9□□□□□ -1.14
CPNE4-208ENST00000511604 TMEM94Q12767 1356 aa7.9□□□□□ -1.14
CPNE4-208ENST00000511604 HGSO14964 777 aaPredicted RBP7.9□□□□□ -1.15
CPNE4-208ENST00000511604 BUB1O43683 1085 aa7.9□□□□□ -1.15
CPNE4-208ENST00000511604 MYBP10242 640 aa7.9□□□□□ -1.15
CPNE4-208ENST00000511604 IFNAR2P48551 515 aa7.9□□□□□ -1.15
CPNE4-208ENST00000511604 CCT8P50990 548 aa7.9□□□□□ -1.15
CPNE4-208ENST00000511604 SPAG1Q07617 926 aa7.9□□□□□ -1.15
CPNE4-208ENST00000511604 PTPROQ16827 1216 aa7.9□□□□□ -1.15
CPNE4-208ENST00000511604 PDCD4Q53EL6 469 aaKnown RBP7.9□□□□□ -1.15
CPNE4-208ENST00000511604 TRIM67Q6ZTA4 783 aa7.9□□□□□ -1.15
CPNE4-208ENST00000511604 NRKQ7Z2Y5 1582 aa7.9□□□□□ -1.15
CPNE4-208ENST00000511604 WDR75Q8IWA0 830 aaKnown RBP7.9□□□□□ -1.15
CPNE4-208ENST00000511604 FAM133AQ8N9E0 248 aa7.9□□□□□ -1.15
CPNE4-208ENST00000511604 NRG4Q8WWG1 115 aa7.9□□□□□ -1.15
CPNE4-208ENST00000511604 DDX12PQ92771 950 aa7.9□□□□□ -1.15
CPNE4-208ENST00000511604 NMD3Q96D46 503 aaKnown RBP7.9□□□□□ -1.15
CPNE4-208ENST00000511604 CGREF1Q99674 301 aa7.9□□□□□ -1.15
CPNE4-208ENST00000511604 BHMT2Q9H2M3 363 aa7.9□□□□□ -1.15
CPNE4-208ENST00000511604 DHX36Q9H2U1 1008 aaKnown RBP7.9□□□□□ -1.15
CPNE4-208ENST00000511604 PAG1Q9NWQ8 432 aa7.9□□□□□ -1.15
CPNE4-208ENST00000511604 FBXO9Q9UK97 447 aaPredicted RBP7.9□□□□□ -1.15
CPNE4-208ENST00000511604 TSC22D4Q9Y3Q8 395 aa7.9□□□□□ -1.15
CPNE4-208ENST00000511604 IGSF1Q8N6C5 1336 aa7.9□□□□□ -1.15
CPNE4-208ENST00000511604 ZNF335Q9H4Z2 1342 aaPredicted RBP7.9□□□□□ -1.15
CPNE4-208ENST00000511604 CDK4P11802 303 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 SERPINB8P50452 374 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 DCTN2Q13561 401 aaKnown RBP7.89□□□□□ -1.15
CPNE4-208ENST00000511604 UBAP2Q5T6F2 1119 aaKnown RBP7.89□□□□□ -1.15
CPNE4-208ENST00000511604 RRAGBQ5VZM2 374 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 LRRC8BQ6P9F7 803 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 KSR2Q6VAB6 950 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 FNDC8Q8TC99 324 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 GAB3Q8WWW8 586 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 CASP10Q92851 521 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 DYDC2Q96IM9 177 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 TMEM237Q96Q45 408 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 DRC3Q9H069 523 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 ASCC2Q9H1I8 757 aaPredicted RBP7.89□□□□□ -1.15
CPNE4-208ENST00000511604 DENND2DQ9H6A0 471 aaPredicted RBP7.89□□□□□ -1.15
CPNE4-208ENST00000511604 FGFR1OP2Q9NVK5 253 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 STK32BQ9NY57 414 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 PRELID1Q9Y255 219 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 ALKQ9UM73 1620 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 PASKQ96RG2 1323 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 KIDINS220Q9ULH0 1771 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 SMIM23A6NLE4 172 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 NUTM2BA6NNL0 878 aaPredicted RBP7.89□□□□□ -1.15
CPNE4-208ENST00000511604 NUTM2EB1AL46 878 aaPredicted RBP7.89□□□□□ -1.15
CPNE4-208ENST00000511604 TBC1D12O60347 775 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 PDE5AO76074 875 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 COL6A2P12110 1019 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 PLCG2P16885 1265 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 RGS2P41220 211 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 IARSP41252 1262 aaKnown RBP7.89□□□□□ -1.15
CPNE4-208ENST00000511604 ARFIP2P53365 341 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 EIF3BP55884 814 aaKnown RBP7.89□□□□□ -1.15
CPNE4-208ENST00000511604 FOXD4Q12950 439 aaPredicted RBP7.89□□□□□ -1.15
CPNE4-208ENST00000511604 SPA17Q15506 151 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 ZCWPW2Q504Y3 356 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 KLHL35Q6PF15 583 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 MPRIPQ6WCQ1 1025 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 LRRC74BQ6ZQY2 392 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 MB21D1Q8N884 522 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 SCAIQ8N9R8 606 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 ANKLE1Q8NAG6 615 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 SLC43A3Q8NBI5 491 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 GDAP1Q8TB36 358 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 ZNF184Q99676 751 aaPredicted RBP7.89□□□□□ -1.15
CPNE4-208ENST00000511604 SLC26A6Q9BXS9 759 aa7.89□□□□□ -1.15
CPNE4-208ENST00000511604 PUS7LQ9H0K6 701 aaKnown RBP7.89□□□□□ -1.15
CPNE4-208ENST00000511604 TUT1Q9H6E5 874 aaKnown RBP7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms