RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 QRSL1Q9H0R6 528 aaKnown RBP6.98□□□□□ -1.29
HMGB1P47-201ENST00000511281 USP25Q9UHP3 1055 aa6.98□□□□□ -1.29
HMGB1P47-201ENST00000511281 DENND2AQ9ULE3 1009 aa6.98□□□□□ -1.29
HMGB1P47-201ENST00000511281 DNM3Q9UQ16 869 aa6.98□□□□□ -1.29
HMGB1P47-201ENST00000511281 SIT1Q9Y3P8 196 aa6.98□□□□□ -1.29
HMGB1P47-201ENST00000511281 IFRD1O00458 451 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P47-201ENST00000511281 AP1G1O43747 822 aa6.97□□□□□ -1.29
HMGB1P47-201ENST00000511281 MPIG6BO95866 241 aa6.97□□□□□ -1.29
HMGB1P47-201ENST00000511281 CLEC2LP0C7M8 214 aa6.97□□□□□ -1.29
HMGB1P47-201ENST00000511281 WASP42768 502 aa6.97□□□□□ -1.29
HMGB1P47-201ENST00000511281 PICALMQ13492 652 aa6.97□□□□□ -1.29
HMGB1P47-201ENST00000511281 NR1I3Q14994 352 aa6.97□□□□□ -1.29
HMGB1P47-201ENST00000511281 CCDC62Q6P9F0 684 aa6.97□□□□□ -1.29
HMGB1P47-201ENST00000511281 TSHZ1Q6ZSZ6 1077 aa6.97□□□□□ -1.29
HMGB1P47-201ENST00000511281 USP45Q70EL2 814 aa6.97□□□□□ -1.29
HMGB1P47-201ENST00000511281 SIRT2Q8IXJ6 389 aa6.97□□□□□ -1.29
HMGB1P47-201ENST00000511281 DIS3LQ8TF46 1054 aaKnown RBP6.97□□□□□ -1.29
HMGB1P47-201ENST00000511281 TSPEARQ8WU66 669 aa6.97□□□□□ -1.29
HMGB1P47-201ENST00000511281 COA7Q96BR5 231 aa6.97□□□□□ -1.29
HMGB1P47-201ENST00000511281 GTPBP4Q9BZE4 634 aaKnown RBP6.97□□□□□ -1.29
HMGB1P47-201ENST00000511281 KCTD10Q9H3F6 313 aa6.97□□□□□ -1.29
HMGB1P47-201ENST00000511281 PAK6Q9NQU5 681 aaPredicted RBP6.97□□□□□ -1.29
HMGB1P47-201ENST00000511281 DTLQ9NZJ0 730 aa6.97□□□□□ -1.29
HMGB1P47-201ENST00000511281 H3BML4 177 aa6.96□□□□□ -1.3
HMGB1P47-201ENST00000511281 CTNND1O60716 968 aaKnown RBP6.96□□□□□ -1.3
HMGB1P47-201ENST00000511281 ZBED1O96006 694 aa6.96□□□□□ -1.3
HMGB1P47-201ENST00000511281 OSMP13725 252 aa6.96□□□□□ -1.3
HMGB1P47-201ENST00000511281 RHCEP18577 417 aa6.96□□□□□ -1.3
HMGB1P47-201ENST00000511281 CD97P48960 835 aa6.96□□□□□ -1.3
HMGB1P47-201ENST00000511281 ZNF280AP59817 542 aaPredicted RBP6.96□□□□□ -1.3
HMGB1P47-201ENST00000511281 RHDQ02161 417 aa6.96□□□□□ -1.3
HMGB1P47-201ENST00000511281 ROM1Q03395 351 aa6.96□□□□□ -1.3
HMGB1P47-201ENST00000511281 PRSS36Q5K4E3 855 aa6.96□□□□□ -1.3
HMGB1P47-201ENST00000511281 FAM126BQ8IXS8 530 aa6.96□□□□□ -1.3
HMGB1P47-201ENST00000511281 THEMISQ8N1K5 641 aaPredicted RBP6.96□□□□□ -1.3
HMGB1P47-201ENST00000511281 FERMT2Q96AC1 680 aa6.96□□□□□ -1.3
HMGB1P47-201ENST00000511281 C1GALT1C1Q96EU7 318 aa6.96□□□□□ -1.3
HMGB1P47-201ENST00000511281 TUBGCP5Q96RT8 1024 aa6.96□□□□□ -1.3
HMGB1P47-201ENST00000511281 STRBPQ96SI9 672 aaKnown RBP6.96□□□□□ -1.3
HMGB1P47-201ENST00000511281 PITHD1Q9GZP4 211 aaPredicted RBP6.96□□□□□ -1.3
HMGB1P47-201ENST00000511281 IFT122Q9HBG6 1241 aa6.96□□□□□ -1.3
HMGB1P47-201ENST00000511281 SAP30BPQ9UHR5 308 aaKnown RBP6.96□□□□□ -1.3
HMGB1P47-201ENST00000511281 SERPINB13Q9UIV8 391 aa6.96□□□□□ -1.3
HMGB1P47-201ENST00000511281 ST20-MTHFSA0A0A6YYL1 179 aa6.95□□□□□ -1.3
HMGB1P47-201ENST00000511281 MSTNO14793 375 aa6.95□□□□□ -1.3
HMGB1P47-201ENST00000511281 LRG1P02750 347 aa6.95□□□□□ -1.3
HMGB1P47-201ENST00000511281 NBPF7P0C2Y1 421 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P47-201ENST00000511281 THBS2P35442 1172 aa6.95□□□□□ -1.3
HMGB1P47-201ENST00000511281 GPR15P49685 360 aa6.95□□□□□ -1.3
HMGB1P47-201ENST00000511281 BCAR1P56945 870 aa6.95□□□□□ -1.3
HMGB1P47-201ENST00000511281 GJA9P57773 515 aa6.95□□□□□ -1.3
HMGB1P47-201ENST00000511281 ERVFC1P60507 584 aa6.95□□□□□ -1.3
HMGB1P47-201ENST00000511281 SLC6A3Q01959 620 aa6.95□□□□□ -1.3
HMGB1P47-201ENST00000511281 GRIN1Q05586 938 aa6.95□□□□□ -1.3
HMGB1P47-201ENST00000511281 ADCY2Q08462 1091 aa6.95□□□□□ -1.3
HMGB1P47-201ENST00000511281 TRIM25Q14258 630 aaKnown RBP6.95□□□□□ -1.3
HMGB1P47-201ENST00000511281 ZNF267Q14586 743 aaPredicted RBP6.95□□□□□ -1.3
HMGB1P47-201ENST00000511281 CCDC178Q5BJE1 867 aa6.95□□□□□ -1.3
HMGB1P47-201ENST00000511281 CD276Q5ZPR3 534 aa6.95□□□□□ -1.3
HMGB1P47-201ENST00000511281 SLFN12LQ6IEE8 588 aa6.95□□□□□ -1.3
HMGB1P47-201ENST00000511281 CATIPQ7Z7H3 387 aa6.95□□□□□ -1.3
HMGB1P47-201ENST00000511281 HIPK4Q8NE63 616 aa6.95□□□□□ -1.3
HMGB1P47-201ENST00000511281 IL17RAQ96F46 866 aa6.95□□□□□ -1.3
HMGB1P47-201ENST00000511281 MAP3K14Q99558 947 aa6.95□□□□□ -1.3
HMGB1P47-201ENST00000511281 TMEM60Q9H2L4 133 aa6.95□□□□□ -1.3
HMGB1P47-201ENST00000511281 PRDM12Q9H4Q4 367 aa6.95□□□□□ -1.3
HMGB1P47-201ENST00000511281 PRDM7Q9NQW5 492 aa6.95□□□□□ -1.3
HMGB1P47-201ENST00000511281 PRSS50Q9UI38 385 aa6.95□□□□□ -1.3
HMGB1P47-201ENST00000511281 EDARQ9UNE0 448 aa6.95□□□□□ -1.3
HMGB1P47-201ENST00000511281 ZC3H12DA2A288 527 aaKnown RBP6.94□□□□□ -1.3
HMGB1P47-201ENST00000511281 A6NNZ2 444 aa6.94□□□□□ -1.3
HMGB1P47-201ENST00000511281 NFIBO00712 420 aa6.94□□□□□ -1.3
HMGB1P47-201ENST00000511281 APAF1O14727 1248 aa6.94□□□□□ -1.3
HMGB1P47-201ENST00000511281 TUSC2O75896 110 aa6.94□□□□□ -1.3
HMGB1P47-201ENST00000511281 LPLP06858 475 aa6.94□□□□□ -1.3
HMGB1P47-201ENST00000511281 RAC2P15153 192 aa6.94□□□□□ -1.3
HMGB1P47-201ENST00000511281 PDCP20941 246 aa6.94□□□□□ -1.3
HMGB1P47-201ENST00000511281 PTGS1P23219 599 aa6.94□□□□□ -1.3
HMGB1P47-201ENST00000511281 MAPKAPK2P49137 400 aa6.94□□□□□ -1.3
HMGB1P47-201ENST00000511281 SLC16A1P53985 500 aa6.94□□□□□ -1.3
HMGB1P47-201ENST00000511281 SPIDRQ14159 915 aa6.94□□□□□ -1.3
HMGB1P47-201ENST00000511281 COBLL1Q53SF7 1204 aa6.94□□□□□ -1.3
HMGB1P47-201ENST00000511281 IL31Q6EBC2 164 aa6.94□□□□□ -1.3
HMGB1P47-201ENST00000511281 PROSER1Q86XN7 944 aa6.94□□□□□ -1.3
HMGB1P47-201ENST00000511281 SPICE1Q8N0Z3 855 aa6.94□□□□□ -1.3
HMGB1P47-201ENST00000511281 OR14C36Q8NHC7 312 aa6.94□□□□□ -1.3
HMGB1P47-201ENST00000511281 MYLIPQ8WY64 445 aa6.94□□□□□ -1.3
HMGB1P47-201ENST00000511281 MVB12AQ96EY5 273 aa6.94□□□□□ -1.3
HMGB1P47-201ENST00000511281 ACO2Q99798 780 aaKnown RBP6.94□□□□□ -1.3
HMGB1P47-201ENST00000511281 C19orf44Q9H6X5 657 aa6.94□□□□□ -1.3
HMGB1P47-201ENST00000511281 FAM204AQ9H8W3 233 aa6.94□□□□□ -1.3
HMGB1P47-201ENST00000511281 NGRNQ9NPE2 291 aaKnown RBP6.94□□□□□ -1.3
HMGB1P47-201ENST00000511281 SCOCQ9UIL1 159 aa6.94□□□□□ -1.3
HMGB1P47-201ENST00000511281 GPR160Q9UJ42 338 aa6.94□□□□□ -1.3
HMGB1P47-201ENST00000511281 YBX2Q9Y2T7 364 aaKnown RBP6.94□□□□□ -1.3
HMGB1P47-201ENST00000511281 CDY2AQ9Y6F7 541 aa6.94□□□□□ -1.3
HMGB1P47-201ENST00000511281 PRAMEF22A3QJZ6 481 aa6.93□□□□□ -1.3
HMGB1P47-201ENST00000511281 FAM227AF5H4B4 570 aa6.93□□□□□ -1.3
HMGB1P47-201ENST00000511281 F8W031 263 aaPredicted RBP6.93□□□□□ -1.3
HMGB1P47-201ENST00000511281 TPP1O14773 563 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms