RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 TMEM40Q8WWA1 233 aa15.65■□□□□ 0.1
DDX41-212ENST00000511040 APBB2Q92870 758 aa15.65■□□□□ 0.1
DDX41-212ENST00000511040 CEP170P1Q96L14 293 aa15.65■□□□□ 0.1
DDX41-212ENST00000511040 GUCD1Q96NT3 240 aa15.65■□□□□ 0.1
DDX41-212ENST00000511040 MAP7D2Q96T17 732 aa15.65■□□□□ 0.1
DDX41-212ENST00000511040 OSMRQ99650 979 aa15.65■□□□□ 0.1
DDX41-212ENST00000511040 ZBED2Q9BTP6 218 aa15.65■□□□□ 0.1
DDX41-212ENST00000511040 ZNF576Q9H609 170 aa15.65■□□□□ 0.1
DDX41-212ENST00000511040 ZSWIM4Q9H7M6 989 aa15.65■□□□□ 0.1
DDX41-212ENST00000511040 CYP26B1Q9NR63 512 aa15.65■□□□□ 0.1
DDX41-212ENST00000511040 PCDHA11Q9Y5I1 949 aa15.65■□□□□ 0.1
DDX41-212ENST00000511040 MICAL3Q7RTP6 2002 aa15.65■□□□□ 0.1
DDX41-212ENST00000511040 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.64■□□□□ 0.09
DDX41-212ENST00000511040 TLL1O43897 1013 aa15.64■□□□□ 0.09
DDX41-212ENST00000511040 EFCAB14O75071 495 aa15.64■□□□□ 0.09
DDX41-212ENST00000511040 GPR32O75388 356 aa15.64■□□□□ 0.09
DDX41-212ENST00000511040 ARHGEF15O94989 841 aa15.64■□□□□ 0.09
DDX41-212ENST00000511040 CA3P07451 260 aa15.64■□□□□ 0.09
DDX41-212ENST00000511040 TMOD1P28289 359 aa15.64■□□□□ 0.09
DDX41-212ENST00000511040 NLRP11P59045 1033 aaKnown RBP15.64■□□□□ 0.09
DDX41-212ENST00000511040 PAK2Q13177 524 aa15.64■□□□□ 0.09
DDX41-212ENST00000511040 PTGDRQ13258 359 aa15.64■□□□□ 0.09
DDX41-212ENST00000511040 XKR9Q5GH70 373 aa15.64■□□□□ 0.09
DDX41-212ENST00000511040 FERMT3Q86UX7 667 aa15.64■□□□□ 0.09
DDX41-212ENST00000511040 SNX21Q969T3 373 aa15.64■□□□□ 0.09
DDX41-212ENST00000511040 HSD17B14Q9BPX1 270 aa15.64■□□□□ 0.09
DDX41-212ENST00000511040 PADI3Q9ULW8 664 aa15.64■□□□□ 0.09
DDX41-212ENST00000511040 NOC2LQ9Y3T9 749 aaKnown RBP15.64■□□□□ 0.09
DDX41-212ENST00000511040 KDM3AQ9Y4C1 1321 aa15.64■□□□□ 0.09
DDX41-212ENST00000511040 LCHNA4D1U4 455 aa15.63■□□□□ 0.09
DDX41-212ENST00000511040 UPP2O95045 317 aa15.63■□□□□ 0.09
DDX41-212ENST00000511040 IBSPP21815 317 aaPredicted RBP15.63■□□□□ 0.09
DDX41-212ENST00000511040 CRYBB1P53674 252 aaPredicted RBP15.63■□□□□ 0.09
DDX41-212ENST00000511040 NFX1Q12986 1120 aaKnown RBP15.63■□□□□ 0.09
DDX41-212ENST00000511040 GRIN2CQ14957 1233 aa15.63■□□□□ 0.09
DDX41-212ENST00000511040 PPP2R2DQ66LE6 453 aa15.63■□□□□ 0.09
DDX41-212ENST00000511040 HSCBQ8IWL3 235 aa15.63■□□□□ 0.09
DDX41-212ENST00000511040 PIGOQ8TEQ8 1089 aa15.63■□□□□ 0.09
DDX41-212ENST00000511040 LINC01599Q8WXQ3 324 aa15.63■□□□□ 0.09
DDX41-212ENST00000511040 SCLT1Q96NL6 688 aa15.63■□□□□ 0.09
DDX41-212ENST00000511040 ADAMTS10Q9H324 1103 aa15.63■□□□□ 0.09
DDX41-212ENST00000511040 TMX1Q9H3N1 280 aa15.63■□□□□ 0.09
DDX41-212ENST00000511040 SLC28A3Q9HAS3 691 aa15.63■□□□□ 0.09
DDX41-212ENST00000511040 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.63■□□□□ 0.09
DDX41-212ENST00000511040 SUCLA2Q9P2R7 463 aaPredicted RBP15.63■□□□□ 0.09
DDX41-212ENST00000511040 ENPP3O14638 875 aa15.62■□□□□ 0.09
DDX41-212ENST00000511040 MAFO75444 373 aaPredicted RBP15.62■□□□□ 0.09
DDX41-212ENST00000511040 MED24O75448 989 aa15.62■□□□□ 0.09
DDX41-212ENST00000511040 RPS6KA5O75582 802 aa15.62■□□□□ 0.09
DDX41-212ENST00000511040 SPATA31C1P0DKV0 1188 aa15.62■□□□□ 0.09
DDX41-212ENST00000511040 POLGP54098 1239 aaPredicted RBP15.62■□□□□ 0.09
DDX41-212ENST00000511040 IL17AQ16552 155 aa15.62■□□□□ 0.09
DDX41-212ENST00000511040 RILPL1Q5EBL4 403 aa15.62■□□□□ 0.09
DDX41-212ENST00000511040 OTUD6AQ7L8S5 288 aa15.62■□□□□ 0.09
DDX41-212ENST00000511040 USP38Q8NB14 1042 aa15.62■□□□□ 0.09
DDX41-212ENST00000511040 NEK9Q8TD19 979 aa15.62■□□□□ 0.09
DDX41-212ENST00000511040 MYLIPQ8WY64 445 aa15.62■□□□□ 0.09
DDX41-212ENST00000511040 TMEM143Q96AN5 459 aa15.62■□□□□ 0.09
DDX41-212ENST00000511040 INTS4Q96HW7 963 aaKnown RBP15.62■□□□□ 0.09
DDX41-212ENST00000511040 CDX2Q99626 313 aaPredicted RBP15.62■□□□□ 0.09
DDX41-212ENST00000511040 CERS4Q9HA82 394 aa15.62■□□□□ 0.09
DDX41-212ENST00000511040 ERVK-5Q9HDB9 667 aa15.62■□□□□ 0.09
DDX41-212ENST00000511040 SQORQ9Y6N5 450 aa15.62■□□□□ 0.09
DDX41-212ENST00000511040 TMEM265A0A087WTH1 108 aa15.61■□□□□ 0.09
DDX41-212ENST00000511040 IGKV6-21A0A0C4DH24 114 aa15.61■□□□□ 0.09
DDX41-212ENST00000511040 CSDE1O75534 798 aaKnown RBP15.61■□□□□ 0.09
DDX41-212ENST00000511040 GJB5O95377 273 aa15.61■□□□□ 0.09
DDX41-212ENST00000511040 PDCP20941 246 aa15.61■□□□□ 0.09
DDX41-212ENST00000511040 SYT1P21579 422 aa15.61■□□□□ 0.09
DDX41-212ENST00000511040 DNM2P50570 870 aa15.61■□□□□ 0.09
DDX41-212ENST00000511040 GPC3P51654 580 aa15.61■□□□□ 0.09
DDX41-212ENST00000511040 POTEGQ6S5H5 508 aa15.61■□□□□ 0.09
DDX41-212ENST00000511040 SPRED2Q7Z698 418 aa15.61■□□□□ 0.09
DDX41-212ENST00000511040 RTN4RL1Q86UN2 441 aaPredicted RBP15.61■□□□□ 0.09
DDX41-212ENST00000511040 FAM228AQ86W67 206 aa15.61■□□□□ 0.09
DDX41-212ENST00000511040 CATSPER3Q86XQ3 398 aa15.61■□□□□ 0.09
DDX41-212ENST00000511040 KSR1Q8IVT5 923 aa15.61■□□□□ 0.09
DDX41-212ENST00000511040 ERMNQ8TAM6 284 aa15.61■□□□□ 0.09
DDX41-212ENST00000511040 NLRP7Q8WX94 980 aa15.61■□□□□ 0.09
DDX41-212ENST00000511040 SLC7A3Q8WY07 619 aa15.61■□□□□ 0.09
DDX41-212ENST00000511040 PRDM12Q9H4Q4 367 aa15.61■□□□□ 0.09
DDX41-212ENST00000511040 TUFT1Q9NNX1 390 aa15.61■□□□□ 0.09
DDX41-212ENST00000511040 ST3GAL5Q9UNP4 418 aa15.61■□□□□ 0.09
DDX41-212ENST00000511040 PP2D1A8MPX8 630 aa15.6■□□□□ 0.09
DDX41-212ENST00000511040 MGEA5O60502 916 aa15.6■□□□□ 0.09
DDX41-212ENST00000511040 LYPLA2O95372 231 aa15.6■□□□□ 0.09
DDX41-212ENST00000511040 FGFR4P22455 802 aa15.6■□□□□ 0.09
DDX41-212ENST00000511040 CCT6AP40227 531 aaKnown RBP15.6■□□□□ 0.09
DDX41-212ENST00000511040 RFC5P40937 340 aa15.6■□□□□ 0.09
DDX41-212ENST00000511040 FXR2P51116 673 aaKnown RBP eCLIP15.6■□□□□ 0.09
DDX41-212ENST00000511040 EMC2Q15006 297 aa15.6■□□□□ 0.09
DDX41-212ENST00000511040 RHPN2Q8IUC4 686 aa15.6■□□□□ 0.09
DDX41-212ENST00000511040 SPRYD3Q8NCJ5 442 aa15.6■□□□□ 0.09
DDX41-212ENST00000511040 NLRP4Q96MN2 994 aa15.6■□□□□ 0.09
DDX41-212ENST00000511040 CCDC43Q96MW1 224 aaKnown RBP15.6■□□□□ 0.09
DDX41-212ENST00000511040 RAD9AQ99638 391 aa15.6■□□□□ 0.09
DDX41-212ENST00000511040 JPH2Q9BR39 696 aaPredicted RBP15.6■□□□□ 0.09
DDX41-212ENST00000511040 DHX33Q9H6R0 707 aaKnown RBP15.6■□□□□ 0.09
DDX41-212ENST00000511040 ANKEF1Q9NU02 776 aa15.6■□□□□ 0.09
DDX41-212ENST00000511040 LRWD1Q9UFC0 647 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms