RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 B4E1Z4 1266 aa7.69□□□□□ -1.18
NUP54-209ENST00000510569 STAT5BP51692 787 aa7.69□□□□□ -1.18
NUP54-209ENST00000510569 MAP3K12Q12852 859 aa7.69□□□□□ -1.18
NUP54-209ENST00000510569 ARHGAP44Q17R89 818 aa7.69□□□□□ -1.18
NUP54-209ENST00000510569 ZCCHC8Q6NZY4 707 aaKnown RBP7.69□□□□□ -1.18
NUP54-209ENST00000510569 GPR135Q8IZ08 494 aa7.69□□□□□ -1.18
NUP54-209ENST00000510569 PCED1AQ9H1Q7 454 aa7.69□□□□□ -1.18
NUP54-209ENST00000510569 NELFAQ9H3P2 528 aa7.69□□□□□ -1.18
NUP54-209ENST00000510569 SLC26A4O43511 780 aa7.68□□□□□ -1.18
NUP54-209ENST00000510569 FOXL1Q12952 345 aa7.68□□□□□ -1.18
NUP54-209ENST00000510569 FNDC3BQ53EP0 1204 aaKnown RBP7.68□□□□□ -1.18
NUP54-209ENST00000510569 USP39Q53GS9 565 aaKnown RBP7.68□□□□□ -1.18
NUP54-209ENST00000510569 DDX53Q86TM3 631 aaKnown RBP7.68□□□□□ -1.18
NUP54-209ENST00000510569 OR14K1Q8NGZ2 314 aa7.68□□□□□ -1.18
NUP54-209ENST00000510569 CTDP1Q9Y5B0 961 aaPredicted RBP7.68□□□□□ -1.18
NUP54-209ENST00000510569 GLRX3O76003 335 aaKnown RBP7.67□□□□□ -1.18
NUP54-209ENST00000510569 PRLP01236 227 aa7.67□□□□□ -1.18
NUP54-209ENST00000510569 ACRV1P26436 265 aa7.67□□□□□ -1.18
NUP54-209ENST00000510569 IGFALSP35858 605 aa7.67□□□□□ -1.18
NUP54-209ENST00000510569 NRN1LQ496H8 165 aa7.67□□□□□ -1.18
NUP54-209ENST00000510569 ZFPM1Q8IX07 1006 aa7.67□□□□□ -1.18
NUP54-209ENST00000510569 ZNF808Q8N4W9 903 aaPredicted RBP7.67□□□□□ -1.18
NUP54-209ENST00000510569 CHST14Q8NCH0 376 aa7.67□□□□□ -1.18
NUP54-209ENST00000510569 CLUHP3Q96NS8 147 aa7.67□□□□□ -1.18
NUP54-209ENST00000510569 PLA2G3Q9NZ20 509 aa7.67□□□□□ -1.18
NUP54-209ENST00000510569 CDK11AQ9UQ88 783 aaPredicted RBP7.67□□□□□ -1.18
NUP54-209ENST00000510569 M0R2C6 588 aa7.66□□□□□ -1.18
NUP54-209ENST00000510569 PLSCR1O15162 318 aa7.66□□□□□ -1.18
NUP54-209ENST00000510569 RAPGEF3O95398 923 aa7.66□□□□□ -1.18
NUP54-209ENST00000510569 MSX2P35548 267 aaPredicted RBP7.66□□□□□ -1.18
NUP54-209ENST00000510569 NFE2L2Q16236 605 aa7.66□□□□□ -1.18
NUP54-209ENST00000510569 EXTL1Q92935 676 aa7.66□□□□□ -1.18
NUP54-209ENST00000510569 LPPQ93052 612 aa7.66□□□□□ -1.18
NUP54-209ENST00000510569 E2F7Q96AV8 911 aa7.66□□□□□ -1.18
NUP54-209ENST00000510569 DNAJC2Q99543 621 aaKnown RBP7.66□□□□□ -1.18
NUP54-209ENST00000510569 SAMD15Q9P1V8 674 aa7.66□□□□□ -1.18
NUP54-209ENST00000510569 HS3ST3A1Q9Y663 406 aa7.66□□□□□ -1.18
NUP54-209ENST00000510569 DVL2O14641 736 aa7.65□□□□□ -1.18
NUP54-209ENST00000510569 DNAJC8O75937 253 aaPredicted RBP7.65□□□□□ -1.18
NUP54-209ENST00000510569 HMGA2P52926 109 aa7.65□□□□□ -1.18
NUP54-209ENST00000510569 SQSTM1Q13501 440 aa7.65□□□□□ -1.18
NUP54-209ENST00000510569 ADGRE4PQ86SQ3 457 aa7.65□□□□□ -1.18
NUP54-209ENST00000510569 SHCBP1Q8NEM2 672 aa7.65□□□□□ -1.18
NUP54-209ENST00000510569 SREK1Q8WXA9 508 aaKnown RBP7.65□□□□□ -1.18
NUP54-209ENST00000510569 ERCC4Q92889 916 aaPredicted RBP7.65□□□□□ -1.18
NUP54-209ENST00000510569 MRIQ9BWK5 157 aa7.65□□□□□ -1.18
NUP54-209ENST00000510569 ZNF341Q9BYN7 854 aa7.65□□□□□ -1.18
NUP54-209ENST00000510569 AGO3Q9H9G7 860 aaKnown RBP7.65□□□□□ -1.18
NUP54-209ENST00000510569 FAM184BQ9ULE4 1060 aa7.65□□□□□ -1.18
NUP54-209ENST00000510569 NPIPB8E9PQR5 432 aa7.64□□□□□ -1.19
NUP54-209ENST00000510569 ASLP04424 464 aa7.64□□□□□ -1.19
NUP54-209ENST00000510569 KIF11P52732 1056 aa7.64□□□□□ -1.19
NUP54-209ENST00000510569 SESN2P58004 480 aaPredicted RBP7.64□□□□□ -1.19
NUP54-209ENST00000510569 PTH1RQ03431 593 aa7.64□□□□□ -1.19
NUP54-209ENST00000510569 KLF10Q13118 480 aa7.64□□□□□ -1.19
NUP54-209ENST00000510569 KLHDC10Q6PID8 442 aa7.64□□□□□ -1.19
NUP54-209ENST00000510569 OR5AN1Q8NGI8 311 aa7.64□□□□□ -1.19
NUP54-209ENST00000510569 IL17DQ8TAD2 202 aa7.64□□□□□ -1.19
NUP54-209ENST00000510569 RABGGTAQ92696 567 aa7.64□□□□□ -1.19
NUP54-209ENST00000510569 ACSS2Q9NR19 701 aa7.64□□□□□ -1.19
NUP54-209ENST00000510569 SUV39H1O43463 412 aa7.63□□□□□ -1.19
NUP54-209ENST00000510569 KRT37O76014 449 aa7.63□□□□□ -1.19
NUP54-209ENST00000510569 ROM1Q03395 351 aa7.63□□□□□ -1.19
NUP54-209ENST00000510569 RIN1Q13671 783 aa7.63□□□□□ -1.19
NUP54-209ENST00000510569 GRM7Q14831 915 aa7.63□□□□□ -1.19
NUP54-209ENST00000510569 CACTINQ8WUQ7 758 aaKnown RBP7.63□□□□□ -1.19
NUP54-209ENST00000510569 TLR9Q9NR96 1032 aa7.63□□□□□ -1.19
NUP54-209ENST00000510569 TRAF5O00463 557 aa7.62□□□□□ -1.19
NUP54-209ENST00000510569 RGS3P49796 1198 aa7.62□□□□□ -1.19
NUP54-209ENST00000510569 ADCY7P51828 1080 aa7.62□□□□□ -1.19
NUP54-209ENST00000510569 SLC6A3Q01959 620 aa7.62□□□□□ -1.19
NUP54-209ENST00000510569 ADAM15Q13444 863 aa7.62□□□□□ -1.19
NUP54-209ENST00000510569 SAFB2Q14151 953 aaKnown RBP eCLIP7.62□□□□□ -1.19
NUP54-209ENST00000510569 ZNF460Q14592 562 aa7.62□□□□□ -1.19
NUP54-209ENST00000510569 BMS1Q14692 1282 aaKnown RBP7.62□□□□□ -1.19
NUP54-209ENST00000510569 C1orf210Q8IVY1 113 aa7.62□□□□□ -1.19
NUP54-209ENST00000510569 SLC7A6OSQ96CW6 309 aaPredicted RBP7.62□□□□□ -1.19
NUP54-209ENST00000510569 MAML3Q96JK9 1138 aa7.62□□□□□ -1.19
NUP54-209ENST00000510569 C16orf92Q96LL3 132 aa7.62□□□□□ -1.19
NUP54-209ENST00000510569 AURKAIP1Q9NWT8 199 aaPredicted RBP7.62□□□□□ -1.19
NUP54-209ENST00000510569 SAE1Q9UBE0 346 aaPredicted RBP7.62□□□□□ -1.19
NUP54-209ENST00000510569 TNPO3Q9Y5L0 923 aaKnown RBP7.62□□□□□ -1.19
NUP54-209ENST00000510569 UBA6A0AVT1 1052 aaPredicted RBP7.61□□□□□ -1.19
NUP54-209ENST00000510569 PTPDC1A2A3K4 754 aa7.61□□□□□ -1.19
NUP54-209ENST00000510569 OPA1O60313 960 aa7.61□□□□□ -1.19
NUP54-209ENST00000510569 ZNF202O95125 648 aa7.61□□□□□ -1.19
NUP54-209ENST00000510569 IGFL4Q6B9Z1 124 aa7.61□□□□□ -1.19
NUP54-209ENST00000510569 SLFN12LQ6IEE8 588 aa7.61□□□□□ -1.19
NUP54-209ENST00000510569 NKD2Q969F2 451 aaPredicted RBP7.61□□□□□ -1.19
NUP54-209ENST00000510569 GFM2Q969S9 779 aaKnown RBP7.61□□□□□ -1.19
NUP54-209ENST00000510569 HAPLN2Q9GZV7 340 aa7.61□□□□□ -1.19
NUP54-209ENST00000510569 SLC6A15Q9H2J7 730 aa7.61□□□□□ -1.19
NUP54-209ENST00000510569 PCIF1Q9H4Z3 704 aa7.61□□□□□ -1.19
NUP54-209ENST00000510569 CABP5Q9NP86 173 aa7.61□□□□□ -1.19
NUP54-209ENST00000510569 ING1Q9UK53 422 aaPredicted RBP7.61□□□□□ -1.19
NUP54-209ENST00000510569 CBX4O00257 560 aa7.6□□□□□ -1.19
NUP54-209ENST00000510569 NARSO43776 548 aaKnown RBP7.6□□□□□ -1.19
NUP54-209ENST00000510569 H2AFYO75367 372 aaKnown RBP7.6□□□□□ -1.19
NUP54-209ENST00000510569 CYP17A1P05093 508 aa7.6□□□□□ -1.19
NUP54-209ENST00000510569 C1SP09871 688 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms