RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 MRPL42Q9Y6G3 142 aaKnown RBP12.35□□□□□ -0.43
RNF4-212ENST00000509258 SMIM35A0A1B0GVV1 85 aa12.34□□□□□ -0.43
RNF4-212ENST00000509258 TMEM150BA6NC51 233 aa12.34□□□□□ -0.43
RNF4-212ENST00000509258 SLC37A4O43826 429 aa12.34□□□□□ -0.43
RNF4-212ENST00000509258 HBP1O60381 514 aa12.34□□□□□ -0.43
RNF4-212ENST00000509258 TBX10O75333 385 aa12.34□□□□□ -0.43
RNF4-212ENST00000509258 CSPG5O95196 566 aa12.34□□□□□ -0.43
RNF4-212ENST00000509258 STBD1O95210 358 aa12.34□□□□□ -0.43
RNF4-212ENST00000509258 DEXIO95424 95 aa12.34□□□□□ -0.43
RNF4-212ENST00000509258 SETQ01105 290 aaPredicted RBP12.34□□□□□ -0.43
RNF4-212ENST00000509258 SMAD4Q13485 552 aaKnown RBP12.34□□□□□ -0.43
RNF4-212ENST00000509258 CLUL1Q15846 466 aa12.34□□□□□ -0.43
RNF4-212ENST00000509258 FAM160B1Q5W0V3 765 aa12.34□□□□□ -0.43
RNF4-212ENST00000509258 ZNF746Q6NUN9 644 aaPredicted RBP12.34□□□□□ -0.43
RNF4-212ENST00000509258 MIS18BP1Q6P0N0 1132 aa12.34□□□□□ -0.43
RNF4-212ENST00000509258 B3GNT9Q6UX72 402 aa12.34□□□□□ -0.43
RNF4-212ENST00000509258 BLIDQ8IZY5 108 aa12.34□□□□□ -0.43
RNF4-212ENST00000509258 NME8Q8N427 588 aa12.34□□□□□ -0.43
RNF4-212ENST00000509258 LINC01465Q8N7H1 131 aa12.34□□□□□ -0.43
RNF4-212ENST00000509258 NECAB1Q8N987 351 aa12.34□□□□□ -0.43
RNF4-212ENST00000509258 DAGLBQ8NCG7 672 aa12.34□□□□□ -0.43
RNF4-212ENST00000509258 MBOAT7Q96N66 472 aa12.34□□□□□ -0.43
RNF4-212ENST00000509258 CELF4Q9BZC1 486 aaKnown RBP12.34□□□□□ -0.43
RNF4-212ENST00000509258 ALG13Q9NP73 1137 aaKnown RBP12.34□□□□□ -0.43
RNF4-212ENST00000509258 PADI3Q9ULW8 664 aa12.34□□□□□ -0.43
RNF4-212ENST00000509258 NOC2LQ9Y3T9 749 aaKnown RBP12.34□□□□□ -0.43
RNF4-212ENST00000509258 KDM3AQ9Y4C1 1321 aa12.34□□□□□ -0.43
RNF4-212ENST00000509258 COL1A2P08123 1366 aa12.33□□□□□ -0.44
RNF4-212ENST00000509258 MBTPS2O43462 519 aa12.33□□□□□ -0.44
RNF4-212ENST00000509258 CHMP2AO43633 222 aa12.33□□□□□ -0.44
RNF4-212ENST00000509258 PFKFB2O60825 505 aa12.33□□□□□ -0.44
RNF4-212ENST00000509258 PSMD10O75832 226 aa12.33□□□□□ -0.44
RNF4-212ENST00000509258 VTNP04004 478 aa12.33□□□□□ -0.44
RNF4-212ENST00000509258 FDPSP14324 419 aaKnown RBP12.33□□□□□ -0.44
RNF4-212ENST00000509258 IRS1P35568 1242 aa12.33□□□□□ -0.44
RNF4-212ENST00000509258 NDUFV1P49821 464 aa12.33□□□□□ -0.44
RNF4-212ENST00000509258 CLCN3P51790 818 aa12.33□□□□□ -0.44
RNF4-212ENST00000509258 KRT76Q01546 638 aa12.33□□□□□ -0.44
RNF4-212ENST00000509258 DLX2Q07687 328 aaPredicted RBP12.33□□□□□ -0.44
RNF4-212ENST00000509258 CAMK1Q14012 370 aa12.33□□□□□ -0.44
RNF4-212ENST00000509258 INF2Q27J81 1249 aa12.33□□□□□ -0.44
RNF4-212ENST00000509258 ETNPPLQ8TBG4 499 aa12.33□□□□□ -0.44
RNF4-212ENST00000509258 BICD2Q8TD16 824 aa12.33□□□□□ -0.44
RNF4-212ENST00000509258 ZNF668Q96K58 619 aaPredicted RBP12.33□□□□□ -0.44
RNF4-212ENST00000509258 ERVK-5Q9HDB9 667 aa12.33□□□□□ -0.44
RNF4-212ENST00000509258 TBC1D22BQ9NU19 505 aa12.33□□□□□ -0.44
RNF4-212ENST00000509258 HCSTQ9UBK5 93 aa12.33□□□□□ -0.44
RNF4-212ENST00000509258 CD207Q9UJ71 328 aa12.33□□□□□ -0.44
RNF4-212ENST00000509258 CYP3A7-CYP3A51PA0A087WV96 503 aa12.32□□□□□ -0.44
RNF4-212ENST00000509258 WNT7AO00755 349 aa12.32□□□□□ -0.44
RNF4-212ENST00000509258 CPLX1O14810 134 aa12.32□□□□□ -0.44
RNF4-212ENST00000509258 GPR32O75388 356 aa12.32□□□□□ -0.44
RNF4-212ENST00000509258 ITGB1P05556 798 aa12.32□□□□□ -0.44
RNF4-212ENST00000509258 CYP3A7P24462 503 aa12.32□□□□□ -0.44
RNF4-212ENST00000509258 USP11P51784 963 aa12.32□□□□□ -0.44
RNF4-212ENST00000509258 DRP2Q13474 957 aa12.32□□□□□ -0.44
RNF4-212ENST00000509258 ME3Q16798 604 aa12.32□□□□□ -0.44
RNF4-212ENST00000509258 KIZQ2M2Z5 673 aa12.32□□□□□ -0.44
RNF4-212ENST00000509258 Q4G0T1 1027 aa12.32□□□□□ -0.44
RNF4-212ENST00000509258 PAN2Q504Q3 1202 aaKnown RBP12.32□□□□□ -0.44
RNF4-212ENST00000509258 ZNF484Q5JVG2 852 aa12.32□□□□□ -0.44
RNF4-212ENST00000509258 FAM228AQ86W67 206 aa12.32□□□□□ -0.44
RNF4-212ENST00000509258 TRIM22Q8IYM9 498 aa12.32□□□□□ -0.44
RNF4-212ENST00000509258 LRRC71Q8N4P6 559 aa12.32□□□□□ -0.44
RNF4-212ENST00000509258 CEP89Q96ST8 783 aa12.32□□□□□ -0.44
RNF4-212ENST00000509258 OSMRQ99650 979 aa12.32□□□□□ -0.44
RNF4-212ENST00000509258 SH2D3AQ9BRG2 576 aa12.32□□□□□ -0.44
RNF4-212ENST00000509258 PHF20Q9BVI0 1012 aa12.32□□□□□ -0.44
RNF4-212ENST00000509258 KCNH6Q9H252 994 aa12.32□□□□□ -0.44
RNF4-212ENST00000509258 IGFLR1Q9H665 355 aa12.32□□□□□ -0.44
RNF4-212ENST00000509258 DISC1Q9NRI5 854 aa12.32□□□□□ -0.44
RNF4-212ENST00000509258 LRFN2Q9ULH4 789 aa12.32□□□□□ -0.44
RNF4-212ENST00000509258 GINS2Q9Y248 185 aa12.32□□□□□ -0.44
RNF4-212ENST00000509258 PCDHA10Q9Y5I2 948 aa12.32□□□□□ -0.44
RNF4-212ENST00000509258 WDR64B1ANS9 1081 aa12.31□□□□□ -0.44
RNF4-212ENST00000509258 EML1O00423 815 aa12.31□□□□□ -0.44
RNF4-212ENST00000509258 LINC01565O15544 149 aa12.31□□□□□ -0.44
RNF4-212ENST00000509258 GAS7O60861 476 aa12.31□□□□□ -0.44
RNF4-212ENST00000509258 PSAPP07602 524 aa12.31□□□□□ -0.44
RNF4-212ENST00000509258 IBSPP21815 317 aaPredicted RBP12.31□□□□□ -0.44
RNF4-212ENST00000509258 DNAJB1P25685 340 aa12.31□□□□□ -0.44
RNF4-212ENST00000509258 GTF2F1P35269 517 aaKnown RBP eCLIP12.31□□□□□ -0.449e-9■■■■■ 35.7
RNF4-212ENST00000509258 SARSP49591 514 aaKnown RBP12.31□□□□□ -0.44
RNF4-212ENST00000509258 PRKCEQ02156 737 aa12.31□□□□□ -0.44
RNF4-212ENST00000509258 ADAM15Q13444 863 aa12.31□□□□□ -0.44
RNF4-212ENST00000509258 HERC4Q5GLZ8 1057 aaPredicted RBP12.31□□□□□ -0.44
RNF4-212ENST00000509258 LRCH2Q5VUJ6 765 aa12.31□□□□□ -0.44
RNF4-212ENST00000509258 CKAP2LQ8IYA6 745 aa12.31□□□□□ -0.44
RNF4-212ENST00000509258 SMAP1Q8IYB5 467 aaPredicted RBP12.31□□□□□ -0.44
RNF4-212ENST00000509258 EFHBQ8N7U6 833 aa12.31□□□□□ -0.44
RNF4-212ENST00000509258 KLHL23Q8NBE8 558 aa12.31□□□□□ -0.44
RNF4-212ENST00000509258 SMRP1Q8NCR6 262 aa12.31□□□□□ -0.44
RNF4-212ENST00000509258 SPPL3Q8TCT6 385 aa12.31□□□□□ -0.44
RNF4-212ENST00000509258 POF1BQ8WVV4 589 aa12.31□□□□□ -0.44
RNF4-212ENST00000509258 BBXQ8WY36 941 aaPredicted RBP12.31□□□□□ -0.44
RNF4-212ENST00000509258 MUTYHQ9UIF7 546 aa12.31□□□□□ -0.44
RNF4-212ENST00000509258 CEP131Q9UPN4 1083 aa12.31□□□□□ -0.44
RNF4-212ENST00000509258 STK36Q9NRP7 1315 aa12.31□□□□□ -0.44
RNF4-212ENST00000509258 FSD2A1L4K1 749 aa12.3□□□□□ -0.44
RNF4-212ENST00000509258 DENND3A2RUS2 1198 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms