RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 MRPS27Q92552 414 aaKnown RBP18.21■□□□□ 0.51
CXCL1-202ENST00000509101 ATOH1Q92858 354 aaPredicted RBP18.21■□□□□ 0.51
CXCL1-202ENST00000509101 S1PR5Q9H228 398 aa18.21■□□□□ 0.51
CXCL1-202ENST00000509101 RIC8AQ9NPQ8 531 aa18.21■□□□□ 0.51
CXCL1-202ENST00000509101 ZNF302Q9NR11 478 aa18.21■□□□□ 0.51
CXCL1-202ENST00000509101 CDH22Q9UJ99 828 aa18.21■□□□□ 0.51
CXCL1-202ENST00000509101 LZTS1Q9Y250 596 aa18.21■□□□□ 0.51
CXCL1-202ENST00000509101 SPTBN4Q9H254 2564 aa18.2■□□□□ 0.5
CXCL1-202ENST00000509101 HIDE1A8MVS5 230 aa18.2■□□□□ 0.5
CXCL1-202ENST00000509101 ZBTB42B2RXF5 422 aa18.2■□□□□ 0.5
CXCL1-202ENST00000509101 VTNP04004 478 aa18.2■□□□□ 0.5
CXCL1-202ENST00000509101 PBX3P40426 434 aa18.2■□□□□ 0.5
CXCL1-202ENST00000509101 ZNF484Q5JVG2 852 aa18.2■□□□□ 0.5
CXCL1-202ENST00000509101 PPP1R18Q6NYC8 613 aa18.2■□□□□ 0.5
CXCL1-202ENST00000509101 TMEM184AQ6ZMB5 413 aa18.2■□□□□ 0.5
CXCL1-202ENST00000509101 TSHZ2Q9NRE2 1034 aa18.2■□□□□ 0.5
CXCL1-202ENST00000509101 MEIS1O00470 390 aa18.19■□□□□ 0.5
CXCL1-202ENST00000509101 SLC27A2O14975 620 aa18.19■□□□□ 0.5
CXCL1-202ENST00000509101 C22orf31O95567 290 aa18.19■□□□□ 0.5
CXCL1-202ENST00000509101 FOSP01100 380 aaPredicted RBP18.19■□□□□ 0.5
CXCL1-202ENST00000509101 DMDP11532 3685 aa18.19■□□□□ 0.5
CXCL1-202ENST00000509101 ZNF76P36508 570 aa18.19■□□□□ 0.5
CXCL1-202ENST00000509101 SREBF1P36956 1147 aa18.19■□□□□ 0.5
CXCL1-202ENST00000509101 CRYBB1P53674 252 aaPredicted RBP18.19■□□□□ 0.5
CXCL1-202ENST00000509101 PLCB3Q01970 1234 aa18.19■□□□□ 0.5
CXCL1-202ENST00000509101 FAM43BQ6ZT52 329 aaPredicted RBP18.19■□□□□ 0.5
CXCL1-202ENST00000509101 RASGRP4Q8TDF6 673 aa18.19■□□□□ 0.5
CXCL1-202ENST00000509101 TMEM117Q9H0C3 514 aa18.19■□□□□ 0.5
CXCL1-202ENST00000509101 PUF60Q9UHX1 559 aaKnown RBP18.19■□□□□ 0.5
CXCL1-202ENST00000509101 ATP4AP20648 1035 aa18.18■□□□□ 0.5
CXCL1-202ENST00000509101 DSC3Q14574 896 aa18.18■□□□□ 0.5
CXCL1-202ENST00000509101 SWSAP1Q6NVH7 229 aa18.18■□□□□ 0.5
CXCL1-202ENST00000509101 MIS18BP1Q6P0N0 1132 aa18.18■□□□□ 0.5
CXCL1-202ENST00000509101 KCNT2Q6UVM3 1135 aa18.18■□□□□ 0.5
CXCL1-202ENST00000509101 LRRC55Q6ZSA7 311 aa18.18■□□□□ 0.5
CXCL1-202ENST00000509101 TRMT1LQ7Z2T5 733 aaKnown RBP18.18■□□□□ 0.5
CXCL1-202ENST00000509101 CKAP2LQ8IYA6 745 aa18.18■□□□□ 0.5
CXCL1-202ENST00000509101 LRRC43Q8N309 656 aa18.18■□□□□ 0.5
CXCL1-202ENST00000509101 METTL13Q8N6R0 699 aa18.18■□□□□ 0.5
CXCL1-202ENST00000509101 KREMEN2Q8NCW0 462 aa18.18■□□□□ 0.5
CXCL1-202ENST00000509101 ZNF558Q96NG5 402 aa18.18■□□□□ 0.5
CXCL1-202ENST00000509101 LSG1Q9H089 658 aaKnown RBP18.18■□□□□ 0.5
CXCL1-202ENST00000509101 ELAC1Q9H777 363 aaKnown RBP18.18■□□□□ 0.5
CXCL1-202ENST00000509101 RNF19AQ9NV58 838 aa18.18■□□□□ 0.5
CXCL1-202ENST00000509101 DENND4AQ7Z401 1863 aa18.18■□□□□ 0.5
CXCL1-202ENST00000509101 H0Y858 1186 aa18.17■□□□□ 0.5
CXCL1-202ENST00000509101 GPR32O75388 356 aa18.17■□□□□ 0.5
CXCL1-202ENST00000509101 PPM1AP35813 382 aa18.17■□□□□ 0.5
CXCL1-202ENST00000509101 CLCN3P51790 818 aa18.17■□□□□ 0.5
CXCL1-202ENST00000509101 FAM189BP81408 668 aa18.17■□□□□ 0.5
CXCL1-202ENST00000509101 AP3B2Q13367 1082 aa18.17■□□□□ 0.5
CXCL1-202ENST00000509101 NIPA1Q7RTP0 329 aa18.17■□□□□ 0.5
CXCL1-202ENST00000509101 TMC7Q7Z402 723 aa18.17■□□□□ 0.5
CXCL1-202ENST00000509101 SGMS1Q86VZ5 419 aa18.17■□□□□ 0.5
CXCL1-202ENST00000509101 PLA2G4DQ86XP0 818 aa18.17■□□□□ 0.5
CXCL1-202ENST00000509101 RIPOR3Q96MK2 946 aa18.17■□□□□ 0.5
CXCL1-202ENST00000509101 CASD1Q96PB1 797 aa18.17■□□□□ 0.5
CXCL1-202ENST00000509101 IRF2BPLQ9H1B7 796 aa18.17■□□□□ 0.5
CXCL1-202ENST00000509101 NGRNQ9NPE2 291 aaKnown RBP18.17■□□□□ 0.5
CXCL1-202ENST00000509101 NR2E1Q9Y466 385 aa18.17■□□□□ 0.5
CXCL1-202ENST00000509101 SMCO2A6NFE2 343 aa18.16■□□□□ 0.5
CXCL1-202ENST00000509101 FAM86B1E9PN63 330 aa18.16■□□□□ 0.5
CXCL1-202ENST00000509101 HOXA2O43364 376 aa18.16■□□□□ 0.5
CXCL1-202ENST00000509101 FAM86B2P0C5J1 330 aa18.16■□□□□ 0.5
CXCL1-202ENST00000509101 HOXB8P17481 243 aaPredicted RBP18.16■□□□□ 0.5
CXCL1-202ENST00000509101 CLK2P49760 499 aaKnown RBP18.16■□□□□ 0.5
CXCL1-202ENST00000509101 MTMR3Q13615 1198 aa18.16■□□□□ 0.5
CXCL1-202ENST00000509101 CREB3L3Q68CJ9 461 aa18.16■□□□□ 0.5
CXCL1-202ENST00000509101 APOA5Q6Q788 366 aa18.16■□□□□ 0.5
CXCL1-202ENST00000509101 SYNE3Q6ZMZ3 975 aa18.16■□□□□ 0.5
CXCL1-202ENST00000509101 ABI1Q8IZP0 508 aa18.16■□□□□ 0.5
CXCL1-202ENST00000509101 RNF169Q8NCN4 708 aa18.16■□□□□ 0.5
CXCL1-202ENST00000509101 BBXQ8WY36 941 aaPredicted RBP18.16■□□□□ 0.5
CXCL1-202ENST00000509101 CASP10Q92851 521 aa18.16■□□□□ 0.5
CXCL1-202ENST00000509101 POMKQ9H5K3 350 aa18.16■□□□□ 0.5
CXCL1-202ENST00000509101 RBM28Q9NW13 759 aaKnown RBP18.16■□□□□ 0.5
CXCL1-202ENST00000509101 IGLV3-22A0A075B6J6 115 aa18.15■□□□□ 0.5
CXCL1-202ENST00000509101 C2CD4DB7Z1M9 353 aa18.15■□□□□ 0.5
CXCL1-202ENST00000509101 IPO5O00410 1097 aaKnown RBP18.15■□□□□ 0.5
CXCL1-202ENST00000509101 DHX15O43143 795 aaKnown RBP18.15■□□□□ 0.5
CXCL1-202ENST00000509101 CA8P35219 290 aa18.15■□□□□ 0.5
CXCL1-202ENST00000509101 KRT17Q04695 432 aa18.15■□□□□ 0.5
CXCL1-202ENST00000509101 TPRNQ4KMQ1 711 aa18.15■□□□□ 0.5
CXCL1-202ENST00000509101 JAKMIP3Q5VZ66 844 aa18.15■□□□□ 0.5
CXCL1-202ENST00000509101 TEX2Q8IWB9 1127 aa18.15■□□□□ 0.5
CXCL1-202ENST00000509101 BARHL2Q9NY43 387 aa18.15■□□□□ 0.5
CXCL1-202ENST00000509101 SPG21Q9NZD8 308 aa18.15■□□□□ 0.5
CXCL1-202ENST00000509101 SORCS3Q9UPU3 1222 aa18.15■□□□□ 0.5
CXCL1-202ENST00000509101 AKT3Q9Y243 479 aa18.15■□□□□ 0.5
CXCL1-202ENST00000509101 HCFC2Q9Y5Z7 792 aa18.15■□□□□ 0.5
CXCL1-202ENST00000509101 hCG_1984214I3L0E3 225 aa18.14■□□□□ 0.49
CXCL1-202ENST00000509101 GALR2O43603 387 aaPredicted RBP18.14■□□□□ 0.49
CXCL1-202ENST00000509101 BRD1O95696 1058 aa18.14■□□□□ 0.49
CXCL1-202ENST00000509101 NLRP11P59045 1033 aaKnown RBP18.14■□□□□ 0.49
CXCL1-202ENST00000509101 FUT2Q10981 343 aa18.14■□□□□ 0.49
CXCL1-202ENST00000509101 SMC1AQ14683 1233 aaKnown RBP18.14■□□□□ 0.49
CXCL1-202ENST00000509101 RTN1Q16799 776 aa18.14■□□□□ 0.49
CXCL1-202ENST00000509101 CLLU1OSQ5K130 101 aa18.14■□□□□ 0.49
CXCL1-202ENST00000509101 CES5AQ6NT32 575 aa18.14■□□□□ 0.49
CXCL1-202ENST00000509101 ECHDC2Q86YB7 292 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms