RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 FAM47CQ5HY64 1035 aa5.89□□□□□ -1.47
PDLIM5-211ENST00000508531 AGBL4Q5VU57 503 aa5.89□□□□□ -1.47
PDLIM5-211ENST00000508531 ZC3H7AQ8IWR0 971 aaKnown RBP5.89□□□□□ -1.47
PDLIM5-211ENST00000508531 CISD2Q8N5K1 135 aaKnown RBP5.89□□□□□ -1.47
PDLIM5-211ENST00000508531 SCYL1Q96KG9 808 aa5.89□□□□□ -1.47
PDLIM5-211ENST00000508531 DHRS4Q9BTZ2 278 aa5.89□□□□□ -1.47
PDLIM5-211ENST00000508531 ZDHHC5Q9C0B5 715 aa5.89□□□□□ -1.47
PDLIM5-211ENST00000508531 KIAA1683Q9H0B3 1180 aa5.89□□□□□ -1.47
PDLIM5-211ENST00000508531 C12orf65Q9H3J6 166 aaKnown RBP5.89□□□□□ -1.47
PDLIM5-211ENST00000508531 SMURF1Q9HCE7 757 aa5.89□□□□□ -1.47
PDLIM5-211ENST00000508531 GALNT8Q9NY28 637 aa5.89□□□□□ -1.47
PDLIM5-211ENST00000508531 PTPRTO14522 1441 aa5.89□□□□□ -1.47
PDLIM5-211ENST00000508531 POGZQ7Z3K3 1410 aa5.89□□□□□ -1.47
PDLIM5-211ENST00000508531 CDC14BO60729 498 aa5.88□□□□□ -1.47
PDLIM5-211ENST00000508531 CLASP2O75122 1294 aaKnown RBP5.88□□□□□ -1.47
PDLIM5-211ENST00000508531 HMGCRP04035 888 aa5.88□□□□□ -1.47
PDLIM5-211ENST00000508531 NAT1P18440 290 aa5.88□□□□□ -1.47
PDLIM5-211ENST00000508531 KLF10Q13118 480 aa5.88□□□□□ -1.47
PDLIM5-211ENST00000508531 NRN1LQ496H8 165 aa5.88□□□□□ -1.47
PDLIM5-211ENST00000508531 USP39Q53GS9 565 aaKnown RBP5.88□□□□□ -1.47
PDLIM5-211ENST00000508531 LARP4Q71RC2 724 aaKnown RBP eCLIP5.88□□□□□ -1.47
PDLIM5-211ENST00000508531 OR14A2Q96R54 314 aa5.88□□□□□ -1.47
PDLIM5-211ENST00000508531 PCED1AQ9H1Q7 454 aa5.88□□□□□ -1.47
PDLIM5-211ENST00000508531 UCKL1Q9NWZ5 548 aa5.88□□□□□ -1.47
PDLIM5-211ENST00000508531 BTBD7Q9P203 1132 aa5.88□□□□□ -1.47
PDLIM5-211ENST00000508531 CDC42EP3Q9UKI2 254 aa5.88□□□□□ -1.47
PDLIM5-211ENST00000508531 MRPS23Q9Y3D9 190 aaKnown RBP5.88□□□□□ -1.47
PDLIM5-211ENST00000508531 KDM2BQ8NHM5 1336 aa5.88□□□□□ -1.47
PDLIM5-211ENST00000508531 MATN2O00339 956 aa5.87□□□□□ -1.47
PDLIM5-211ENST00000508531 GSTA4O15217 222 aa5.87□□□□□ -1.47
PDLIM5-211ENST00000508531 RAD17O75943 681 aa5.87□□□□□ -1.47
PDLIM5-211ENST00000508531 MPIG6BO95866 241 aa5.87□□□□□ -1.47
PDLIM5-211ENST00000508531 ACO1P21399 889 aaKnown RBP5.87□□□□□ -1.47
PDLIM5-211ENST00000508531 FOXE3Q13461 319 aa5.87□□□□□ -1.47
PDLIM5-211ENST00000508531 SEC23AQ15436 765 aa5.87□□□□□ -1.47
PDLIM5-211ENST00000508531 LRSAM1Q6UWE0 723 aa5.87□□□□□ -1.47
PDLIM5-211ENST00000508531 RNF207Q6ZRF8 634 aa5.87□□□□□ -1.47
PDLIM5-211ENST00000508531 Q6ZSN1 163 aa5.87□□□□□ -1.47
PDLIM5-211ENST00000508531 CXXC5Q7LFL8 322 aaKnown RBP5.87□□□□□ -1.47
PDLIM5-211ENST00000508531 EDAQ92838 391 aa5.87□□□□□ -1.47
PDLIM5-211ENST00000508531 WNK4Q96J92 1243 aa5.87□□□□□ -1.47
PDLIM5-211ENST00000508531 AMNQ9BXJ7 453 aa5.87□□□□□ -1.47
PDLIM5-211ENST00000508531 TANGO6Q9C0B7 1094 aa5.87□□□□□ -1.47
PDLIM5-211ENST00000508531 SIRPGQ9P1W8 387 aa5.87□□□□□ -1.47
PDLIM5-211ENST00000508531 NDOR1Q9UHB4 597 aa5.87□□□□□ -1.47
PDLIM5-211ENST00000508531 FBXO10Q9UK96 956 aa5.87□□□□□ -1.47
PDLIM5-211ENST00000508531 UHRF1BP1Q6BDS2 1440 aa5.87□□□□□ -1.47
PDLIM5-211ENST00000508531 BIVM-ERCC5R4GMW8 1640 aa5.87□□□□□ -1.47
PDLIM5-211ENST00000508531 IQGAP2Q13576 1575 aa5.86□□□□□ -1.47
PDLIM5-211ENST00000508531 GOLGA3Q08378 1498 aa5.86□□□□□ -1.47
PDLIM5-211ENST00000508531 PHLDB1Q86UU1 1377 aa5.86□□□□□ -1.47
PDLIM5-211ENST00000508531 NPIPB8E9PQR5 432 aa5.86□□□□□ -1.47
PDLIM5-211ENST00000508531 SCDO00767 359 aa5.86□□□□□ -1.47
PDLIM5-211ENST00000508531 ARHGAP6O43182 974 aa5.86□□□□□ -1.47
PDLIM5-211ENST00000508531 MMEP08473 750 aa5.86□□□□□ -1.47
PDLIM5-211ENST00000508531 ATP2B1P20020 1258 aa5.86□□□□□ -1.47
PDLIM5-211ENST00000508531 HERVK_113P62684 666 aa5.86□□□□□ -1.47
PDLIM5-211ENST00000508531 LACTBP83111 547 aaPredicted RBP5.86□□□□□ -1.47
PDLIM5-211ENST00000508531 CD83Q01151 205 aa5.86□□□□□ -1.47
PDLIM5-211ENST00000508531 DUSP8Q13202 625 aa5.86□□□□□ -1.47
PDLIM5-211ENST00000508531 STILQ15468 1287 aa5.86□□□□□ -1.47
PDLIM5-211ENST00000508531 NBPF6Q5VWK0 638 aa5.86□□□□□ -1.47
PDLIM5-211ENST00000508531 OTOP2Q7RTS6 562 aa5.86□□□□□ -1.47
PDLIM5-211ENST00000508531 POLNQ7Z5Q5 900 aa5.86□□□□□ -1.47
PDLIM5-211ENST00000508531 EXTL1Q92935 676 aa5.86□□□□□ -1.47
PDLIM5-211ENST00000508531 NBPF4Q96M43 638 aa5.86□□□□□ -1.47
PDLIM5-211ENST00000508531 BTBD2Q9BX70 525 aa5.86□□□□□ -1.47
PDLIM5-211ENST00000508531 PLA2G12BQ9BX93 195 aa5.86□□□□□ -1.47
PDLIM5-211ENST00000508531 SLC52A2Q9HAB3 445 aa5.86□□□□□ -1.47
PDLIM5-211ENST00000508531 ING1Q9UK53 422 aaPredicted RBP5.86□□□□□ -1.47
PDLIM5-211ENST00000508531 SLC30A1Q9Y6M5 507 aa5.86□□□□□ -1.47
PDLIM5-211ENST00000508531 SIGLEC1Q9BZZ2 1709 aa5.85□□□□□ -1.47
PDLIM5-211ENST00000508531 FRMPD1Q5SYB0 1578 aa5.85□□□□□ -1.47
PDLIM5-211ENST00000508531 FANCAO15360 1455 aa5.85□□□□□ -1.47
PDLIM5-211ENST00000508531 IQSEC2Q5JU85 1478 aa5.85□□□□□ -1.47
PDLIM5-211ENST00000508531 AKNAQ7Z591 1439 aa5.85□□□□□ -1.47
PDLIM5-211ENST00000508531 DHX57Q6P158 1386 aaKnown RBP5.85□□□□□ -1.47
PDLIM5-211ENST00000508531 TOM1O60784 492 aa5.85□□□□□ -1.47
PDLIM5-211ENST00000508531 ECE1P42892 770 aa5.85□□□□□ -1.47
PDLIM5-211ENST00000508531 NFYCQ13952 458 aa5.85□□□□□ -1.47
PDLIM5-211ENST00000508531 TM4SF20Q53R12 229 aa5.85□□□□□ -1.47
PDLIM5-211ENST00000508531 MIIPQ5JXC2 388 aa5.85□□□□□ -1.47
PDLIM5-211ENST00000508531 FSTL4Q6MZW2 842 aa5.85□□□□□ -1.47
PDLIM5-211ENST00000508531 USP30Q70CQ3 517 aa5.85□□□□□ -1.47
PDLIM5-211ENST00000508531 FILIP1Q7Z7B0 1213 aa5.85□□□□□ -1.47
PDLIM5-211ENST00000508531 NOSTRINQ8IVI9 506 aa5.85□□□□□ -1.47
PDLIM5-211ENST00000508531 WDR48Q8TAF3 677 aa5.85□□□□□ -1.47
PDLIM5-211ENST00000508531 CFHR4Q92496 578 aa5.85□□□□□ -1.47
PDLIM5-211ENST00000508531 PUF60Q9UHX1 559 aaKnown RBP5.85□□□□□ -1.47
PDLIM5-211ENST00000508531 COQ6Q9Y2Z9 468 aa5.85□□□□□ -1.47
PDLIM5-211ENST00000508531 CENPJQ9HC77 1338 aaPredicted RBP5.84□□□□□ -1.47
PDLIM5-211ENST00000508531 RASGRP1O95267 797 aa5.84□□□□□ -1.47
PDLIM5-211ENST00000508531 GTF2F1P35269 517 aaKnown RBP eCLIP5.84□□□□□ -1.47
PDLIM5-211ENST00000508531 MOGSQ13724 837 aa5.84□□□□□ -1.47
PDLIM5-211ENST00000508531 RASA3Q14644 834 aa5.84□□□□□ -1.47
PDLIM5-211ENST00000508531 EIF4HQ15056 248 aaKnown RBP5.84□□□□□ -1.47
PDLIM5-211ENST00000508531 PCOLCEQ15113 449 aa5.84□□□□□ -1.47
PDLIM5-211ENST00000508531 KANK2Q63ZY3 851 aa5.84□□□□□ -1.47
PDLIM5-211ENST00000508531 ASB15Q8WXK1 588 aa5.84□□□□□ -1.47
PDLIM5-211ENST00000508531 ZNF503Q96F45 646 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms