RNA–Protein interactions for RNA: ENST00000508304.5

TRAPPC13-209, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-209ENST00000508304 RPUSD2Q8IZ73 545 aaKnown RBP6.79□□□□□ -1.32
TRAPPC13-209ENST00000508304 ANKRD35Q8N283 1001 aa6.79□□□□□ -1.32
TRAPPC13-209ENST00000508304 SCNN1GP51170 649 aa6.78□□□□□ -1.32
TRAPPC13-209ENST00000508304 ZC3H6P61129 1189 aaKnown RBP6.78□□□□□ -1.32
TRAPPC13-209ENST00000508304 SUMO1P63165 101 aaKnown RBP6.78□□□□□ -1.32
TRAPPC13-209ENST00000508304 HNRNPA0Q13151 305 aaKnown RBP6.78□□□□□ -1.32
TRAPPC13-209ENST00000508304 FAM47CQ5HY64 1035 aa6.78□□□□□ -1.32
TRAPPC13-209ENST00000508304 Q6ZRM9 215 aa6.78□□□□□ -1.32
TRAPPC13-209ENST00000508304 VOPP1Q96AW1 172 aa6.78□□□□□ -1.32
TRAPPC13-209ENST00000508304 GMLQ99445 158 aa6.78□□□□□ -1.32
TRAPPC13-209ENST00000508304 VWA7Q9Y334 891 aa6.78□□□□□ -1.32
TRAPPC13-209ENST00000508304 ASB1Q9Y576 335 aa6.78□□□□□ -1.32
TRAPPC13-209ENST00000508304 TRBV23-1A0A0A0MS06 115 aa6.77□□□□□ -1.33
TRAPPC13-209ENST00000508304 A0A1W2PRX2 142 aa6.77□□□□□ -1.33
TRAPPC13-209ENST00000508304 TMEM191CA6NGB0 347 aa6.77□□□□□ -1.33
TRAPPC13-209ENST00000508304 RASSF10A6NK89 507 aa6.77□□□□□ -1.33
TRAPPC13-209ENST00000508304 ADAM15Q13444 863 aa6.77□□□□□ -1.33
TRAPPC13-209ENST00000508304 SPATC1Q76KD6 591 aa6.77□□□□□ -1.33
TRAPPC13-209ENST00000508304 LPPQ93052 612 aa6.77□□□□□ -1.33
TRAPPC13-209ENST00000508304 PCDHA9Q9Y5H5 950 aa6.77□□□□□ -1.33
TRAPPC13-209ENST00000508304 PRAMEF22A3QJZ6 481 aa6.76□□□□□ -1.33
TRAPPC13-209ENST00000508304 SCDO00767 359 aa6.76□□□□□ -1.33
TRAPPC13-209ENST00000508304 STAT3P40763 770 aa6.76□□□□□ -1.33
TRAPPC13-209ENST00000508304 DNM2P50570 870 aa6.76□□□□□ -1.33
TRAPPC13-209ENST00000508304 ADCY7P51828 1080 aa6.76□□□□□ -1.33
TRAPPC13-209ENST00000508304 GABREP78334 506 aa6.76□□□□□ -1.33
TRAPPC13-209ENST00000508304 TOB2Q14106 344 aaPredicted RBP6.76□□□□□ -1.33
TRAPPC13-209ENST00000508304 FAM209AQ5JX71 171 aa6.76□□□□□ -1.33
TRAPPC13-209ENST00000508304 FOXB2Q5VYV0 432 aa6.76□□□□□ -1.33
TRAPPC13-209ENST00000508304 LAIR1Q6GTX8 287 aa6.76□□□□□ -1.33
TRAPPC13-209ENST00000508304 FSTL4Q6MZW2 842 aa6.76□□□□□ -1.33
TRAPPC13-209ENST00000508304 MIEF2Q96C03 454 aa6.76□□□□□ -1.33
TRAPPC13-209ENST00000508304 GBP4Q96PP9 640 aa6.76□□□□□ -1.33
TRAPPC13-209ENST00000508304 CDC6Q99741 560 aa6.76□□□□□ -1.33
TRAPPC13-209ENST00000508304 KCNH7Q9NS40 1196 aa6.76□□□□□ -1.33
TRAPPC13-209ENST00000508304 MSRB2Q9Y3D2 182 aa6.76□□□□□ -1.33
TRAPPC13-209ENST00000508304 FOXP2O15409 715 aa6.75□□□□□ -1.33
TRAPPC13-209ENST00000508304 TCF3P15923 654 aa6.75□□□□□ -1.33
TRAPPC13-209ENST00000508304 APEX1P27695 318 aaKnown RBP6.75□□□□□ -1.33
TRAPPC13-209ENST00000508304 SDHAP31040 664 aa6.75□□□□□ -1.33
TRAPPC13-209ENST00000508304 ATP2C1P98194 919 aaPredicted RBP6.75□□□□□ -1.33
TRAPPC13-209ENST00000508304 ZC3H7AQ8IWR0 971 aaKnown RBP6.75□□□□□ -1.33
TRAPPC13-209ENST00000508304 SLC43A3Q8NBI5 491 aa6.75□□□□□ -1.33
TRAPPC13-209ENST00000508304 HIPK4Q8NE63 616 aa6.75□□□□□ -1.33
TRAPPC13-209ENST00000508304 SLC6A15Q9H2J7 730 aa6.75□□□□□ -1.33
TRAPPC13-209ENST00000508304 GOLGA6L22H0YM25 854 aa6.74□□□□□ -1.33
TRAPPC13-209ENST00000508304 CRTAMO95727 393 aa6.74□□□□□ -1.33
TRAPPC13-209ENST00000508304 BMP5P22003 454 aa6.74□□□□□ -1.33
TRAPPC13-209ENST00000508304 ADRA1BP35368 520 aa6.74□□□□□ -1.33
TRAPPC13-209ENST00000508304 MAN2A2P49641 1150 aa6.74□□□□□ -1.33
TRAPPC13-209ENST00000508304 ADAM8P78325 824 aa6.74□□□□□ -1.33
TRAPPC13-209ENST00000508304 MAP3K12Q12852 859 aa6.74□□□□□ -1.33
TRAPPC13-209ENST00000508304 CNGB1Q14028 1251 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC13-209ENST00000508304 KLHDC10Q6PID8 442 aa6.74□□□□□ -1.33
TRAPPC13-209ENST00000508304 ZNF662Q6ZS27 426 aa6.74□□□□□ -1.33
TRAPPC13-209ENST00000508304 CISD2Q8N5K1 135 aaKnown RBP6.74□□□□□ -1.33
TRAPPC13-209ENST00000508304 ZBTB38Q8NAP3 1195 aaPredicted RBP6.74□□□□□ -1.33
TRAPPC13-209ENST00000508304 CALML6Q8TD86 181 aa6.74□□□□□ -1.33
TRAPPC13-209ENST00000508304 DLG3Q92796 817 aa6.74□□□□□ -1.33
TRAPPC13-209ENST00000508304 TRAF5O00463 557 aa6.73□□□□□ -1.33
TRAPPC13-209ENST00000508304 RPS6KA4O75676 772 aa6.73□□□□□ -1.33
TRAPPC13-209ENST00000508304 FBLP22087 321 aaKnown RBP6.73□□□□□ -1.33
TRAPPC13-209ENST00000508304 PROZP22891 400 aa6.73□□□□□ -1.33
TRAPPC13-209ENST00000508304 ACAP1Q15027 740 aa6.73□□□□□ -1.33
TRAPPC13-209ENST00000508304 MRGPREQ86SM8 312 aa6.73□□□□□ -1.33
TRAPPC13-209ENST00000508304 SLC7A6OSQ96CW6 309 aaPredicted RBP6.73□□□□□ -1.33
TRAPPC13-209ENST00000508304 EXOC2Q96KP1 924 aa6.73□□□□□ -1.33
TRAPPC13-209ENST00000508304 GPHA2Q96T91 129 aa6.73□□□□□ -1.33
TRAPPC13-209ENST00000508304 NRDE2Q9H7Z3 1164 aa6.73□□□□□ -1.33
TRAPPC13-209ENST00000508304 B3GALT1Q9Y5Z6 326 aa6.73□□□□□ -1.33
TRAPPC13-209ENST00000508304 PTGS2P35354 604 aa6.72□□□□□ -1.33
TRAPPC13-209ENST00000508304 RBM25P49756 843 aaKnown RBP6.72□□□□□ -1.33
TRAPPC13-209ENST00000508304 SESN2P58004 480 aaPredicted RBP6.72□□□□□ -1.33
TRAPPC13-209ENST00000508304 FSTL1Q12841 308 aa6.72□□□□□ -1.33
TRAPPC13-209ENST00000508304 PDPK1O15530 556 aa6.71□□□□□ -1.34
TRAPPC13-209ENST00000508304 H2AFYO75367 372 aaKnown RBP6.71□□□□□ -1.34
TRAPPC13-209ENST00000508304 ALDH6A1Q02252 535 aaKnown RBP6.71□□□□□ -1.34
TRAPPC13-209ENST00000508304 CATSPEREQ5SY80 951 aa6.71□□□□□ -1.34
TRAPPC13-209ENST00000508304 FAM111BQ6SJ93 734 aa6.71□□□□□ -1.34
TRAPPC13-209ENST00000508304 GAREM2Q75VX8 874 aa6.71□□□□□ -1.34
TRAPPC13-209ENST00000508304 HAS1Q92839 578 aa6.71□□□□□ -1.34
TRAPPC13-209ENST00000508304 IPO9Q96P70 1041 aaKnown RBP6.71□□□□□ -1.34
TRAPPC13-209ENST00000508304 C2orf78A6NCI8 922 aa6.7□□□□□ -1.34
TRAPPC13-209ENST00000508304 GCP02774 474 aa6.7□□□□□ -1.34
TRAPPC13-209ENST00000508304 RASGRF1Q13972 1273 aa6.7□□□□□ -1.34
TRAPPC13-209ENST00000508304 ELAVL1Q15717 326 aaKnown RBP6.7□□□□□ -1.34
TRAPPC13-209ENST00000508304 RHOUQ7L0Q8 258 aa6.7□□□□□ -1.34
TRAPPC13-209ENST00000508304 GSPT2Q8IYD1 628 aaKnown RBP6.7□□□□□ -1.34
TRAPPC13-209ENST00000508304 GFM2Q969S9 779 aaKnown RBP6.7□□□□□ -1.34
TRAPPC13-209ENST00000508304 FOXRED1Q96CU9 486 aaPredicted RBP6.7□□□□□ -1.34
TRAPPC13-209ENST00000508304 GPR87Q9BY21 358 aa6.7□□□□□ -1.34
TRAPPC13-209ENST00000508304 TRIM55Q9BYV6 548 aa6.7□□□□□ -1.34
TRAPPC13-209ENST00000508304 CELF4Q9BZC1 486 aaKnown RBP6.7□□□□□ -1.34
TRAPPC13-209ENST00000508304 XDHP47989 1333 aa6.7□□□□□ -1.34
TRAPPC13-209ENST00000508304 KLRG2A4D1S0 409 aaPredicted RBP6.69□□□□□ -1.34
TRAPPC13-209ENST00000508304 RABGGTBP53611 331 aa6.69□□□□□ -1.34
TRAPPC13-209ENST00000508304 SSRP1Q08945 709 aaKnown RBP6.69□□□□□ -1.34
TRAPPC13-209ENST00000508304 MTERF2Q49AM1 385 aa6.69□□□□□ -1.34
TRAPPC13-209ENST00000508304 MBNL2Q5VZF2 373 aaKnown RBP6.69□□□□□ -1.34
TRAPPC13-209ENST00000508304 HTR3DQ70Z44 454 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms