RNA–Protein interactions for RNA: ENST00000508279.5

DDX41-209, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 776 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-209ENST00000508279 COL4A4P53420 1690 aaPredicted RBP10.53□□□□□ -0.72
DDX41-209ENST00000508279 TTC3P53804 2025 aa10.53□□□□□ -0.72
DDX41-209ENST00000508279 EPOPA6NHQ4 379 aa10.53□□□□□ -0.72
DDX41-209ENST00000508279 ENPP3O14638 875 aa10.53□□□□□ -0.72
DDX41-209ENST00000508279 TBX3O15119 743 aa10.53□□□□□ -0.72
DDX41-209ENST00000508279 RPS6KA5O75582 802 aa10.53□□□□□ -0.72
DDX41-209ENST00000508279 P4HBP07237 508 aaKnown RBP10.53□□□□□ -0.72
DDX41-209ENST00000508279 QARSP47897 775 aaKnown RBP10.53□□□□□ -0.72
DDX41-209ENST00000508279 NLRP11P59045 1033 aaKnown RBP10.53□□□□□ -0.72
DDX41-209ENST00000508279 ADGRE1Q14246 886 aa10.53□□□□□ -0.72
DDX41-209ENST00000508279 XKR3Q5GH77 459 aa10.53□□□□□ -0.72
DDX41-209ENST00000508279 B3GNT9Q6UX72 402 aa10.53□□□□□ -0.72
DDX41-209ENST00000508279 TPH2Q8IWU9 490 aa10.53□□□□□ -0.72
DDX41-209ENST00000508279 FBXO18Q8NFZ0 1043 aa10.53□□□□□ -0.72
DDX41-209ENST00000508279 NLRP7Q8WX94 980 aa10.53□□□□□ -0.72
DDX41-209ENST00000508279 TOP1MTQ969P6 601 aa10.53□□□□□ -0.72
DDX41-209ENST00000508279 DYDC2Q96IM9 177 aa10.53□□□□□ -0.72
DDX41-209ENST00000508279 LXNQ9BS40 222 aa10.53□□□□□ -0.72
DDX41-209ENST00000508279 TTC12Q9H892 705 aaPredicted RBP10.53□□□□□ -0.72
DDX41-209ENST00000508279 RGL1Q9NZL6 768 aa10.53□□□□□ -0.72
DDX41-209ENST00000508279 PCDHA12Q9UN75 941 aa10.53□□□□□ -0.72
DDX41-209ENST00000508279 NOC2LQ9Y3T9 749 aaKnown RBP10.53□□□□□ -0.72
DDX41-209ENST00000508279 EYSQ5T1H1 3165 aa10.53□□□□□ -0.72
DDX41-209ENST00000508279 ARID2Q68CP9 1835 aa10.53□□□□□ -0.72
DDX41-209ENST00000508279 CHD7Q9P2D1 2997 aa10.53□□□□□ -0.72
DDX41-209ENST00000508279 DENND3A2RUS2 1198 aa10.52□□□□□ -0.73
DDX41-209ENST00000508279 LINC01553A4QN01 128 aa10.52□□□□□ -0.73
DDX41-209ENST00000508279 GTPBP6O43824 516 aaPredicted RBP10.52□□□□□ -0.73
DDX41-209ENST00000508279 DKC1O60832 514 aaKnown RBP eCLIP10.52□□□□□ -0.73
DDX41-209ENST00000508279 GJB2P29033 226 aa10.52□□□□□ -0.73
DDX41-209ENST00000508279 CRYBB1P53674 252 aaPredicted RBP10.52□□□□□ -0.73
DDX41-209ENST00000508279 NPEPPSP55786 919 aa10.52□□□□□ -0.73
DDX41-209ENST00000508279 MKRN4PQ13434 485 aaPredicted RBP10.52□□□□□ -0.73
DDX41-209ENST00000508279 DRP2Q13474 957 aa10.52□□□□□ -0.73
DDX41-209ENST00000508279 EPHA7Q15375 998 aa10.52□□□□□ -0.73
DDX41-209ENST00000508279 USP38Q8NB14 1042 aa10.52□□□□□ -0.73
DDX41-209ENST00000508279 GDPD5Q8WTR4 605 aa10.52□□□□□ -0.73
DDX41-209ENST00000508279 TMEM40Q8WWA1 233 aa10.52□□□□□ -0.73
DDX41-209ENST00000508279 LINC01599Q8WXQ3 324 aa10.52□□□□□ -0.73
DDX41-209ENST00000508279 CEP170P1Q96L14 293 aa10.52□□□□□ -0.73
DDX41-209ENST00000508279 TGS1Q96RS0 853 aaKnown RBP10.52□□□□□ -0.73
DDX41-209ENST00000508279 TMEM60Q9H2L4 133 aa10.52□□□□□ -0.73
DDX41-209ENST00000508279 FOXP1Q9H334 677 aaPredicted RBP10.52□□□□□ -0.73
DDX41-209ENST00000508279 WRAP73Q9P2S5 460 aaPredicted RBP10.52□□□□□ -0.73
DDX41-209ENST00000508279 LRFN2Q9ULH4 789 aa10.52□□□□□ -0.73
DDX41-209ENST00000508279 NOL7Q9UMY1 257 aaKnown RBP10.52□□□□□ -0.73
DDX41-209ENST00000508279 KIF3AQ9Y496 699 aa10.52□□□□□ -0.73
DDX41-209ENST00000508279 KDM3AQ9Y4C1 1321 aa10.52□□□□□ -0.73
DDX41-209ENST00000508279 PRRC2BQ5JSZ5 2229 aaKnown RBP10.52□□□□□ -0.73
DDX41-209ENST00000508279 A0A087WWV3 80 aa10.51□□□□□ -0.73
DDX41-209ENST00000508279 POTEMA6NI47 508 aa10.51□□□□□ -0.73
DDX41-209ENST00000508279 H3BQV1 296 aa10.51□□□□□ -0.73
DDX41-209ENST00000508279 ZBTB39O15060 712 aa10.51□□□□□ -0.73
DDX41-209ENST00000508279 GPR182O15218 404 aa10.51□□□□□ -0.73
DDX41-209ENST00000508279 GPR32O75388 356 aa10.51□□□□□ -0.73
DDX41-209ENST00000508279 CSDE1O75534 798 aaKnown RBP10.51□□□□□ -0.73
DDX41-209ENST00000508279 STBD1O95210 358 aa10.51□□□□□ -0.73
DDX41-209ENST00000508279 FGFR4P22455 802 aa10.51□□□□□ -0.73
DDX41-209ENST00000508279 TECP42680 631 aa10.51□□□□□ -0.73
DDX41-209ENST00000508279 MCM2P49736 904 aa10.51□□□□□ -0.73
DDX41-209ENST00000508279 DNM2P50570 870 aa10.51□□□□□ -0.73
DDX41-209ENST00000508279 POLGP54098 1239 aaPredicted RBP10.51□□□□□ -0.73
DDX41-209ENST00000508279 NBR1Q14596 966 aa10.51□□□□□ -0.73
DDX41-209ENST00000508279 SKIV2LQ15477 1246 aaKnown RBP10.51□□□□□ -0.73
DDX41-209ENST00000508279 TARBP2Q15633 366 aaKnown RBP10.51□□□□□ -0.73
DDX41-209ENST00000508279 PAN2Q504Q3 1202 aaKnown RBP10.51□□□□□ -0.73
DDX41-209ENST00000508279 XKR9Q5GH70 373 aa10.51□□□□□ -0.73
DDX41-209ENST00000508279 TTC38Q5R3I4 469 aa10.51□□□□□ -0.73
DDX41-209ENST00000508279 ODR4Q5SWX8 454 aa10.51□□□□□ -0.73
DDX41-209ENST00000508279 ANO5Q75V66 913 aa10.51□□□□□ -0.73
DDX41-209ENST00000508279 RTN4RL1Q86UN2 441 aaPredicted RBP10.51□□□□□ -0.73
DDX41-209ENST00000508279 FAM228AQ86W67 206 aa10.51□□□□□ -0.73
DDX41-209ENST00000508279 RHPN2Q8IUC4 686 aa10.51□□□□□ -0.73
DDX41-209ENST00000508279 NOSTRINQ8IVI9 506 aa10.51□□□□□ -0.73
DDX41-209ENST00000508279 ZNF579Q8NAF0 562 aaKnown RBP10.51□□□□□ -0.73
DDX41-209ENST00000508279 CCDC43Q96MW1 224 aaKnown RBP10.51□□□□□ -0.73
DDX41-209ENST00000508279 ADAM2Q99965 735 aa10.51□□□□□ -0.73
DDX41-209ENST00000508279 EIF2AK1Q9BQI3 630 aaKnown RBP10.51□□□□□ -0.73
DDX41-209ENST00000508279 C17orf80Q9BSJ5 609 aa10.51□□□□□ -0.73
DDX41-209ENST00000508279 FTHL17Q9BXU8 183 aa10.51□□□□□ -0.73
DDX41-209ENST00000508279 NIFKQ9BYG3 293 aaKnown RBP10.51□□□□□ -0.73
DDX41-209ENST00000508279 BACH2Q9BYV9 841 aa10.51□□□□□ -0.73
DDX41-209ENST00000508279 TMX1Q9H3N1 280 aa10.51□□□□□ -0.73
DDX41-209ENST00000508279 ERVK-5Q9HDB9 667 aa10.51□□□□□ -0.73
DDX41-209ENST00000508279 CYP26B1Q9NR63 512 aa10.51□□□□□ -0.73
DDX41-209ENST00000508279 ST3GAL5Q9UNP4 418 aa10.51□□□□□ -0.73
DDX41-209ENST00000508279 SMC3Q9UQE7 1217 aa10.51□□□□□ -0.73
DDX41-209ENST00000508279 SQORQ9Y6N5 450 aa10.51□□□□□ -0.73
DDX41-209ENST00000508279 RALGAPA2Q2PPJ7 1873 aa10.51□□□□□ -0.73
DDX41-209ENST00000508279 PRUNE2Q8WUY3 3088 aa10.5□□□□□ -0.73
DDX41-209ENST00000508279 KIAA1671Q9BY89 1806 aa10.5□□□□□ -0.73
DDX41-209ENST00000508279 MGEA5O60502 916 aa10.5□□□□□ -0.73
DDX41-209ENST00000508279 CSPG5O95196 566 aa10.5□□□□□ -0.73
DDX41-209ENST00000508279 OR52Z1P0C646 297 aa10.5□□□□□ -0.73
DDX41-209ENST00000508279 YWHABP31946 246 aaKnown RBP10.5□□□□□ -0.73
DDX41-209ENST00000508279 GPC3P51654 580 aa10.5□□□□□ -0.73
DDX41-209ENST00000508279 HTRA4P83105 476 aaPredicted RBP10.5□□□□□ -0.73
DDX41-209ENST00000508279 SPIRE1Q08AE8 756 aa10.5□□□□□ -0.73
DDX41-209ENST00000508279 GRB10Q13322 594 aa10.5□□□□□ -0.73
DDX41-209ENST00000508279 BTG3Q14201 252 aaPredicted RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms