RNA–Protein interactions for RNA: ENST00000508238.5

UBE2D3-222, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-222ENST00000508238 FAM43BQ6ZT52 329 aaPredicted RBP9.05□□□□□ -0.96
UBE2D3-222ENST00000508238 REXO1Q8N1G1 1221 aaKnown RBP9.05□□□□□ -0.96
UBE2D3-222ENST00000508238 DBF4BQ8NFT6 615 aa9.05□□□□□ -0.96
UBE2D3-222ENST00000508238 BICD2Q8TD16 824 aa9.05□□□□□ -0.96
UBE2D3-222ENST00000508238 SEPT8Q92599 483 aa9.05□□□□□ -0.96
UBE2D3-222ENST00000508238 GLG1Q92896 1179 aa9.05□□□□□ -0.96
UBE2D3-222ENST00000508238 RAD9AQ99638 391 aa9.05□□□□□ -0.96
UBE2D3-222ENST00000508238 AZI2Q9H6S1 392 aa9.05□□□□□ -0.96
UBE2D3-222ENST00000508238 TMEM260Q9NX78 707 aa9.05□□□□□ -0.96
UBE2D3-222ENST00000508238 WDR81Q562E7 1941 aa9.04□□□□□ -0.96
UBE2D3-222ENST00000508238 CHRNA1P02708 482 aa9.04□□□□□ -0.96
UBE2D3-222ENST00000508238 CENPBP07199 599 aaPredicted RBP9.04□□□□□ -0.96
UBE2D3-222ENST00000508238 INSRRP14616 1297 aa9.04□□□□□ -0.96
UBE2D3-222ENST00000508238 ZNF76P36508 570 aa9.04□□□□□ -0.96
UBE2D3-222ENST00000508238 STAT5BP51692 787 aa9.04□□□□□ -0.96
UBE2D3-222ENST00000508238 DEFB103AP81534 67 aa9.04□□□□□ -0.96
UBE2D3-222ENST00000508238 HTRA4P83105 476 aaPredicted RBP9.04□□□□□ -0.96
UBE2D3-222ENST00000508238 AKAP17AQ02040 695 aaKnown RBP9.04□□□□□ -0.96
UBE2D3-222ENST00000508238 GRIK4Q16099 956 aa9.04□□□□□ -0.96
UBE2D3-222ENST00000508238 JAKMIP3Q5VZ66 844 aa9.04□□□□□ -0.96
UBE2D3-222ENST00000508238 ABHD15Q6UXT9 468 aa9.04□□□□□ -0.96
UBE2D3-222ENST00000508238 RSPH3Q86UC2 560 aa9.04□□□□□ -0.96
UBE2D3-222ENST00000508238 PLA2G4DQ86XP0 818 aa9.04□□□□□ -0.96
UBE2D3-222ENST00000508238 USP38Q8NB14 1042 aa9.04□□□□□ -0.96
UBE2D3-222ENST00000508238 ARMC2Q8NEN0 867 aa9.04□□□□□ -0.96
UBE2D3-222ENST00000508238 CCDC148Q8NFR7 591 aa9.04□□□□□ -0.96
UBE2D3-222ENST00000508238 APBB2Q92870 758 aa9.04□□□□□ -0.96
UBE2D3-222ENST00000508238 PHKBQ93100 1093 aa9.04□□□□□ -0.96
UBE2D3-222ENST00000508238 IL17RAQ96F46 866 aa9.04□□□□□ -0.96
UBE2D3-222ENST00000508238 PGBD1Q96JS3 809 aa9.04□□□□□ -0.96
UBE2D3-222ENST00000508238 TBC1D22BQ9NU19 505 aa9.04□□□□□ -0.96
UBE2D3-222ENST00000508238 PKD2L1Q9P0L9 805 aa9.04□□□□□ -0.96
UBE2D3-222ENST00000508238 TUBE1Q9UJT0 475 aa9.04□□□□□ -0.96
UBE2D3-222ENST00000508238 INSL6Q9Y581 213 aa9.04□□□□□ -0.96
UBE2D3-222ENST00000508238 IPO5O00410 1097 aaKnown RBP9.03□□□□□ -0.96
UBE2D3-222ENST00000508238 ADAMTS3O15072 1205 aa9.03□□□□□ -0.96
UBE2D3-222ENST00000508238 ARHGEF15O94989 841 aa9.03□□□□□ -0.96
UBE2D3-222ENST00000508238 CCNE2O96020 404 aa9.03□□□□□ -0.96
UBE2D3-222ENST00000508238 AMHP03971 560 aa9.03□□□□□ -0.96
UBE2D3-222ENST00000508238 USP11P51784 963 aa9.03□□□□□ -0.96
UBE2D3-222ENST00000508238 ANAPC15P60006 121 aa9.03□□□□□ -0.96
UBE2D3-222ENST00000508238 ERVK-21P61565 698 aa9.03□□□□□ -0.96
UBE2D3-222ENST00000508238 CCT2P78371 535 aaKnown RBP9.03□□□□□ -0.96
UBE2D3-222ENST00000508238 SETQ01105 290 aaPredicted RBP9.03□□□□□ -0.96
UBE2D3-222ENST00000508238 MGAT3Q09327 533 aa9.03□□□□□ -0.96
UBE2D3-222ENST00000508238 PLCB4Q15147 1175 aa9.03□□□□□ -0.96
UBE2D3-222ENST00000508238 PLA2G2CQ5R387 149 aa9.03□□□□□ -0.96
UBE2D3-222ENST00000508238 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.03□□□□□ -0.964e-6■■■□□ 19.2
UBE2D3-222ENST00000508238 RUFY4Q6ZNE9 571 aa9.03□□□□□ -0.96
UBE2D3-222ENST00000508238 TRIM22Q8IYM9 498 aa9.03□□□□□ -0.96
UBE2D3-222ENST00000508238 ATXN2LQ8WWM7 1075 aaKnown RBP9.03□□□□□ -0.96
UBE2D3-222ENST00000508238 TOP1MTQ969P6 601 aa9.03□□□□□ -0.96
UBE2D3-222ENST00000508238 COL25A1Q9BXS0 654 aaPredicted RBP9.03□□□□□ -0.96
UBE2D3-222ENST00000508238 SLC26A6Q9BXS9 759 aa9.03□□□□□ -0.96
UBE2D3-222ENST00000508238 OSBPL7Q9BZF2 842 aa9.03□□□□□ -0.96
UBE2D3-222ENST00000508238 NCOA5Q9HCD5 579 aaKnown RBP9.03□□□□□ -0.96
UBE2D3-222ENST00000508238 LMCD1Q9NZU5 365 aa9.03□□□□□ -0.96
UBE2D3-222ENST00000508238 PCDHA2Q9Y5H9 948 aa9.03□□□□□ -0.96
UBE2D3-222ENST00000508238 SQORQ9Y6N5 450 aa9.03□□□□□ -0.96
UBE2D3-222ENST00000508238 LOXHD1Q8IVV2 1947 aa9.03□□□□□ -0.96
UBE2D3-222ENST00000508238 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 LCHNA4D1U4 455 aa9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 LINC01553A4QN01 128 aa9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 EPOPA6NHQ4 379 aa9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 EDIL3O43854 480 aa9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 LPXNO60711 386 aa9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 DEXIO95424 95 aa9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 CTSHP09668 335 aa9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 IGFBP4P22692 258 aa9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 MARK3P27448 753 aa9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 SSRP1Q08945 709 aaKnown RBP9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 FBXO47Q5MNV8 452 aa9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 IER5Q5VY09 327 aa9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 FAM160B1Q5W0V3 765 aa9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 GALNT17Q6IS24 598 aa9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 ZNF746Q6NUN9 644 aaPredicted RBP9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 MIS18BP1Q6P0N0 1132 aa9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 CPLX2Q6PUV4 134 aaKnown RBP9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 TMCO2Q7Z6W1 182 aaPredicted RBP9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 SMAP1Q8IYB5 467 aaPredicted RBP9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 NME8Q8N427 588 aa9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 ATP8B4Q8TF62 1192 aa9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 DNAJB3Q8WWF6 145 aa9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 LENG9Q96B70 501 aa9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 ZNF577Q9BSK1 485 aa9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 IFIH1Q9BYX4 1025 aaKnown RBP9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 C22orf23Q9BZE7 217 aa9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 UPF3BQ9BZI7 483 aaKnown RBP9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 PDRG1Q9NUG6 133 aa9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 VPS54Q9P1Q0 977 aa9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 MAFBQ9Y5Q3 323 aaPredicted RBP9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 MTCH2Q9Y6C9 303 aa9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 KDM3AQ9Y4C1 1321 aa9.02□□□□□ -0.97
UBE2D3-222ENST00000508238 MUC3AQ02505 3323 aa9.01□□□□□ -0.97
UBE2D3-222ENST00000508238 CYP3A7-CYP3A51PA0A087WV96 503 aa9.01□□□□□ -0.97
UBE2D3-222ENST00000508238 SMIM35A0A1B0GVV1 85 aa9.01□□□□□ -0.97
UBE2D3-222ENST00000508238 M0R2N6 131 aa9.01□□□□□ -0.97
UBE2D3-222ENST00000508238 CPLX1O14810 134 aa9.01□□□□□ -0.97
UBE2D3-222ENST00000508238 ZBTB24O43167 697 aaPredicted RBP9.01□□□□□ -0.97
UBE2D3-222ENST00000508238 HBP1O60381 514 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms