RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 GOLGA6L1Q8N7Z2 621 aa8.27□□□□□ -1.09
PDGFRA-206ENST00000508170 ARMC2Q8NEN0 867 aa8.27□□□□□ -1.09
PDGFRA-206ENST00000508170 LTV1Q96GA3 475 aaPredicted RBP8.27□□□□□ -1.09
PDGFRA-206ENST00000508170 VPS39Q96JC1 886 aa8.27□□□□□ -1.09
PDGFRA-206ENST00000508170 C16orf45Q96MC5 204 aaPredicted RBP8.27□□□□□ -1.09
PDGFRA-206ENST00000508170 PHF12Q96QT6 1004 aa8.27□□□□□ -1.09
PDGFRA-206ENST00000508170 ZPBPQ9BS86 351 aa8.27□□□□□ -1.09
PDGFRA-206ENST00000508170 JMJD4Q9H9V9 463 aa8.27□□□□□ -1.09
PDGFRA-206ENST00000508170 PPM1HQ9ULR3 514 aa8.27□□□□□ -1.09
PDGFRA-206ENST00000508170 TACC3Q9Y6A5 838 aa8.27□□□□□ -1.09
PDGFRA-206ENST00000508170 TBKBP1A7MCY6 615 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 FSBPO95073 299 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 MYCP01106 439 aaPredicted RBP8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 HSPA1AP0DMV8 641 aaKnown RBP8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 HSPA1BP0DMV9 641 aaKnown RBP8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 CASP5P51878 434 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 FCGRTP55899 365 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 IL2P60568 153 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 IFI35P80217 286 aaPredicted RBP8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 TRIM28Q13263 835 aaKnown RBP8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 IMMTQ16891 758 aaKnown RBP8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 ZMYM1Q5SVZ6 1142 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 TPTE2Q6XPS3 522 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 RNF19BQ6ZMZ0 732 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 AGMOQ6ZNB7 445 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 REC114Q7Z4M0 266 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 TREML1Q86YW5 311 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 LRRC49Q8IUZ0 686 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 COG3Q96JB2 828 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 CEP295NLQ96MC4 621 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 OR10A4Q9H209 315 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 KRT84Q9NSB2 600 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 UBAP1Q9NZ09 502 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 CALCOCO1Q9P1Z2 691 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 ADD3Q9UEY8 706 aaKnown RBP8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 CHORDC1Q9UHD1 332 aaPredicted RBP8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 BARX2Q9UMQ3 279 aaPredicted RBP8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 PCDHB10Q9UN67 800 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 SLC27A5Q9Y2P5 690 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 AP1M2Q9Y6Q5 423 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 TRAV20A0A0B4J274 112 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 KDM4FA0A1W2PPD8 638 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 PI4KAP2A4QPH2 592 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 POLR3GO15318 223 aaPredicted RBP8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 IRAK2O43187 625 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 NMT2O60551 498 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 MAPK3P27361 379 aaPredicted RBP8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 POLD2P49005 469 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 SLC14A1Q13336 389 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 MPP2Q14168 576 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 PGBD2Q6P3X8 592 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 DARS2Q6PI48 645 aaKnown RBP8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 SH3BP5LQ7L8J4 393 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 SCUBE1Q8IWY4 988 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 CCDC33Q8N5R6 958 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 GATAD2BQ8WXI9 593 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 SLC10A4Q96EP9 437 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 NAF1Q96HR8 494 aaKnown RBP8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 SCLYQ96I15 445 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 RABEP2Q9H5N1 569 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 ANTXR1Q9H6X2 564 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 INVSQ9Y283 1065 aa8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 MRPL11Q9Y3B7 192 aaKnown RBP8.26□□□□□ -1.09
PDGFRA-206ENST00000508170 AKNAQ7Z591 1439 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 GOLGA6L3A6NEY3 463 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 ADAMTS3O15072 1205 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 SOAT2O75908 522 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 HNRNPLP14866 589 aaKnown RBP eCLIP8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 IGFALSP35858 605 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 MSH2P43246 934 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 SMTNP53814 917 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 YBEYP58557 167 aaPredicted RBP8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 SLC26A5P58743 744 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 PSMA6P60900 246 aaKnown RBP8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 NCAPHQ15003 741 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 GEN1Q17RS7 908 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 C1orf141Q5JVX7 400 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 IFFO2Q5TF58 517 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 LRCH2Q5VUJ6 765 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 LILRA6Q6PI73 481 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 C11orf88Q6PI97 169 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 GRAMD1CQ8IYS0 662 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 NXPE1Q8N323 547 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 VWA5B2Q8N398 1253 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 TMEM57Q8N5G2 664 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 SPERTQ8NA61 448 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 FAM13CQ8NE31 585 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 RASSF8Q8NHQ8 419 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 DIO2Q92813 273 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 TEKT5Q96M29 485 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 MROH8Q9H579 483 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 VCPKMTQ9H867 229 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 TBCCD1Q9NVR7 557 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 TBC1D7Q9P0N9 293 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 PCOLCE2Q9UKZ9 415 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 CORO2BQ9UQ03 480 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 FANCD2Q9BXW9 1451 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 FKBP9O95302 570 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 SOD2P04179 222 aa8.25□□□□□ -1.09
PDGFRA-206ENST00000508170 CFHP08603 1231 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms