RNA–Protein interactions for RNA: ENST00000507823.5

SFXN1-208, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 2,611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-208ENST00000507823 C12orf56Q8IXR9 622 aa19.37■□□□□ 0.69
SFXN1-208ENST00000507823 RBM46Q8TBY0 533 aaKnown RBP19.37■□□□□ 0.69
SFXN1-208ENST00000507823 CRACR2AQ9BSW2 395 aa19.37■□□□□ 0.69
SFXN1-208ENST00000507823 IFIH1Q9BYX4 1025 aaKnown RBP19.37■□□□□ 0.69
SFXN1-208ENST00000507823 NLRC4Q9NPP4 1024 aa19.37■□□□□ 0.69
SFXN1-208ENST00000507823 PKD2L1Q9P0L9 805 aa19.37■□□□□ 0.69
SFXN1-208ENST00000507823 TFR2Q9UP52 801 aa19.37■□□□□ 0.69
SFXN1-208ENST00000507823 CLIC2O15247 247 aa19.37■□□□□ 0.69
SFXN1-208ENST00000507823 USO1O60763 962 aaKnown RBP19.37■□□□□ 0.69
SFXN1-208ENST00000507823 MCCD1P59942 119 aaPredicted RBP19.37■□□□□ 0.69
SFXN1-208ENST00000507823 KLHDC7AQ5VTJ3 777 aa19.37■□□□□ 0.69
SFXN1-208ENST00000507823 HS2ST1Q7LGA3 356 aa19.37■□□□□ 0.69
SFXN1-208ENST00000507823 HOXC10Q9NYD6 342 aa19.37■□□□□ 0.69
SFXN1-208ENST00000507823 TMOD4Q9NZQ9 345 aa19.37■□□□□ 0.69
SFXN1-208ENST00000507823 FZD1Q9UP38 647 aa19.37■□□□□ 0.69
SFXN1-208ENST00000507823 KIAA1217Q5T5P2 1943 aa19.36■□□□□ 0.69
SFXN1-208ENST00000507823 STAM2O75886 525 aa19.36■□□□□ 0.69
SFXN1-208ENST00000507823 MYCLP12524 364 aaPredicted RBP19.36■□□□□ 0.69
SFXN1-208ENST00000507823 CHMP4BP1P59074 171 aa19.36■□□□□ 0.69
SFXN1-208ENST00000507823 EXOC3L4Q17RC7 722 aa19.36■□□□□ 0.69
SFXN1-208ENST00000507823 TXLNBQ8N3L3 684 aa19.36■□□□□ 0.69
SFXN1-208ENST00000507823 SIX2Q9NPC8 291 aa19.36■□□□□ 0.69
SFXN1-208ENST00000507823 FAM53CQ9NYF3 392 aa19.36■□□□□ 0.69
SFXN1-208ENST00000507823 LARSQ9P2J5 1176 aaKnown RBP19.36■□□□□ 0.69
SFXN1-208ENST00000507823 DDX41Q9UJV9 622 aaKnown RBP19.36■□□□□ 0.69
SFXN1-208ENST00000507823 SPDYE16A6NNV3 312 aaPredicted RBP19.36■□□□□ 0.69
SFXN1-208ENST00000507823 AKR1B10O60218 316 aa19.36■□□□□ 0.69
SFXN1-208ENST00000507823 PLS3P13797 630 aa19.36■□□□□ 0.69
SFXN1-208ENST00000507823 YWHABP31946 246 aaKnown RBP19.36■□□□□ 0.69
SFXN1-208ENST00000507823 PPP2R5AQ15172 486 aa19.36■□□□□ 0.69
SFXN1-208ENST00000507823 UGCGQ16739 394 aa19.36■□□□□ 0.69
SFXN1-208ENST00000507823 NLRX1Q86UT6 975 aa19.36■□□□□ 0.69
SFXN1-208ENST00000507823 FAM186BQ8IYM0 893 aa19.36■□□□□ 0.69
SFXN1-208ENST00000507823 NSUN6Q8TEA1 469 aaKnown RBP19.36■□□□□ 0.69
SFXN1-208ENST00000507823 CYP39A1Q9NYL5 469 aa19.36■□□□□ 0.69
SFXN1-208ENST00000507823 NFASCO94856 1347 aa19.35■□□□□ 0.69
SFXN1-208ENST00000507823 GBP6Q6ZN66 633 aa19.35■□□□□ 0.69
SFXN1-208ENST00000507823 SECISBP2LQ93073 1101 aaKnown RBP19.35■□□□□ 0.69
SFXN1-208ENST00000507823 DEF6Q9H4E7 631 aa19.35■□□□□ 0.69
SFXN1-208ENST00000507823 ACAD9Q9H845 621 aa19.35■□□□□ 0.69
SFXN1-208ENST00000507823 SNCAIPQ9Y6H5 919 aa19.35■□□□□ 0.69
SFXN1-208ENST00000507823 OTOFQ9HC10 1997 aa19.35■□□□□ 0.69
SFXN1-208ENST00000507823 UCHL3P15374 230 aa19.35■□□□□ 0.69
SFXN1-208ENST00000507823 SLC9A1P19634 815 aa19.35■□□□□ 0.69
SFXN1-208ENST00000507823 ANXA13P27216 316 aa19.35■□□□□ 0.69
SFXN1-208ENST00000507823 SNRPFP62306 86 aaKnown RBP19.35■□□□□ 0.69
SFXN1-208ENST00000507823 MOV10L1Q9BXT6 1211 aaKnown RBP19.35■□□□□ 0.69
SFXN1-208ENST00000507823 DAAM1Q9Y4D1 1078 aa19.35■□□□□ 0.69
SFXN1-208ENST00000507823 DUSP10Q9Y6W6 482 aa19.35■□□□□ 0.69
SFXN1-208ENST00000507823 RGS20O76081 388 aa19.34■□□□□ 0.69
SFXN1-208ENST00000507823 KCNA2P16389 499 aa19.34■□□□□ 0.69
SFXN1-208ENST00000507823 PRKCIP41743 596 aa19.34■□□□□ 0.69
SFXN1-208ENST00000507823 CLCN6P51797 869 aa19.34■□□□□ 0.69
SFXN1-208ENST00000507823 APBA1Q02410 837 aa19.34■□□□□ 0.69
SFXN1-208ENST00000507823 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.34■□□□□ 0.69
SFXN1-208ENST00000507823 TRIM58Q8NG06 486 aa19.34■□□□□ 0.69
SFXN1-208ENST00000507823 IKZF4Q9H2S9 585 aa19.34■□□□□ 0.69
SFXN1-208ENST00000507823 TMEM206Q9H813 350 aa19.34■□□□□ 0.69
SFXN1-208ENST00000507823 ZNF446Q9NWS9 450 aa19.34■□□□□ 0.69
SFXN1-208ENST00000507823 ATP8B3O60423 1300 aa19.34■□□□□ 0.69
SFXN1-208ENST00000507823 PPP1R12BO60237 982 aaPredicted RBP19.34■□□□□ 0.69
SFXN1-208ENST00000507823 ZSCAN20P17040 1043 aaPredicted RBP19.34■□□□□ 0.69
SFXN1-208ENST00000507823 MAGEA1P43355 309 aa19.34■□□□□ 0.69
SFXN1-208ENST00000507823 JAM2P57087 298 aa19.34■□□□□ 0.69
SFXN1-208ENST00000507823 GTF2BQ00403 316 aa19.34■□□□□ 0.69
SFXN1-208ENST00000507823 IRF2BP2Q7Z5L9 587 aa19.34■□□□□ 0.69
SFXN1-208ENST00000507823 SMAP1Q8IYB5 467 aaPredicted RBP19.34■□□□□ 0.69
SFXN1-208ENST00000507823 SLC17A8Q8NDX2 589 aa19.34■□□□□ 0.69
SFXN1-208ENST00000507823 A1CFQ9NQ94 594 aaKnown RBP19.34■□□□□ 0.69
SFXN1-208ENST00000507823 SAMM50Q9Y512 469 aa19.34■□□□□ 0.69
SFXN1-208ENST00000507823 ATP1A1P05023 1023 aaKnown RBP19.33■□□□□ 0.69
SFXN1-208ENST00000507823 CDHR1Q96JP9 859 aa19.33■□□□□ 0.69
SFXN1-208ENST00000507823 DRC1Q96MC2 740 aa19.33■□□□□ 0.69
SFXN1-208ENST00000507823 BZW2Q9Y6E2 419 aaKnown RBP19.33■□□□□ 0.69
SFXN1-208ENST00000507823 TESPA1A2RU30 521 aaPredicted RBP19.33■□□□□ 0.68
SFXN1-208ENST00000507823 STBD1O95210 358 aa19.33■□□□□ 0.68
SFXN1-208ENST00000507823 NCKAP1LP55160 1127 aa19.33■□□□□ 0.68
SFXN1-208ENST00000507823 ASIC2Q16515 512 aa19.33■□□□□ 0.68
SFXN1-208ENST00000507823 SLC18A3Q16572 532 aa19.33■□□□□ 0.68
SFXN1-208ENST00000507823 DCAF17Q5H9S7 520 aaPredicted RBP19.33■□□□□ 0.68
SFXN1-208ENST00000507823 TEX35Q5T0J7 233 aa19.33■□□□□ 0.68
SFXN1-208ENST00000507823 KSR1Q8IVT5 923 aa19.33■□□□□ 0.68
SFXN1-208ENST00000507823 RNF10Q8N5U6 811 aaKnown RBP19.33■□□□□ 0.68
SFXN1-208ENST00000507823 MSANTD4Q8NCY6 345 aa19.33■□□□□ 0.68
SFXN1-208ENST00000507823 UPF1Q92900 1129 aaKnown RBP eCLIP19.33■□□□□ 0.68
SFXN1-208ENST00000507823 ADARB2Q9NS39 739 aaKnown RBP19.33■□□□□ 0.68
SFXN1-208ENST00000507823 ARGLU1Q9NWB6 273 aaPredicted RBP19.33■□□□□ 0.68
SFXN1-208ENST00000507823 PCDHA10Q9Y5I2 948 aa19.33■□□□□ 0.68
SFXN1-208ENST00000507823 SAR1BQ9Y6B6 198 aa19.33■□□□□ 0.68
SFXN1-208ENST00000507823 ARID2Q68CP9 1835 aa19.33■□□□□ 0.68
SFXN1-208ENST00000507823 BACH1O14867 736 aa19.32■□□□□ 0.68
SFXN1-208ENST00000507823 MAPK13O15264 365 aa19.32■□□□□ 0.68
SFXN1-208ENST00000507823 ZRANB2O95218 330 aaKnown RBP eCLIP19.32■□□□□ 0.68
SFXN1-208ENST00000507823 ACTN1P12814 892 aa19.32■□□□□ 0.68
SFXN1-208ENST00000507823 GFPT1Q06210 699 aaPredicted RBP19.32■□□□□ 0.68
SFXN1-208ENST00000507823 CHST13Q8NET6 341 aa19.32■□□□□ 0.68
SFXN1-208ENST00000507823 OGFRQ9NZT2 677 aa19.32■□□□□ 0.68
SFXN1-208ENST00000507823 K7ENM7 598 aa19.32■□□□□ 0.68
SFXN1-208ENST00000507823 PRLRP16471 622 aa19.32■□□□□ 0.68
SFXN1-208ENST00000507823 VGLL4Q14135 290 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms