RNA–Protein interactions for RNA: ENST00000507689.1

COL1A1-211, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 549 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-211ENST00000507689 PPP1R16BQ96T49 567 aa17.5■□□□□ 0.39
COL1A1-211ENST00000507689 PRDM12Q9H4Q4 367 aa17.5■□□□□ 0.39
COL1A1-211ENST00000507689 LRFN2Q9ULH4 789 aa17.5■□□□□ 0.39
COL1A1-211ENST00000507689 PADI3Q9ULW8 664 aa17.5■□□□□ 0.39
COL1A1-211ENST00000507689 GTPBP6O43824 516 aaPredicted RBP17.49■□□□□ 0.39
COL1A1-211ENST00000507689 PDCP20941 246 aa17.49■□□□□ 0.39
COL1A1-211ENST00000507689 IGFBP4P22692 258 aa17.49■□□□□ 0.39
COL1A1-211ENST00000507689 U2AF2P26368 475 aaKnown RBP eCLIP17.49■□□□□ 0.39
COL1A1-211ENST00000507689 YWHABP31946 246 aaKnown RBP17.49■□□□□ 0.39
COL1A1-211ENST00000507689 RFC5P40937 340 aa17.49■□□□□ 0.39
COL1A1-211ENST00000507689 CYP4A11Q02928 519 aa17.49■□□□□ 0.39
COL1A1-211ENST00000507689 XKR9Q5GH70 373 aa17.49■□□□□ 0.39
COL1A1-211ENST00000507689 TOP1MTQ969P6 601 aa17.49■□□□□ 0.39
COL1A1-211ENST00000507689 OSMRQ99650 979 aa17.49■□□□□ 0.39
COL1A1-211ENST00000507689 EIF2AK1Q9BQI3 630 aaKnown RBP17.49■□□□□ 0.39
COL1A1-211ENST00000507689 CYP26B1Q9NR63 512 aa17.49■□□□□ 0.39
COL1A1-211ENST00000507689 STK24Q9Y6E0 443 aa17.49■□□□□ 0.39
COL1A1-211ENST00000507689 GAS2O43903 313 aaKnown RBP17.48■□□□□ 0.39
COL1A1-211ENST00000507689 CD2BP2O95400 341 aaKnown RBP17.48■□□□□ 0.39
COL1A1-211ENST00000507689 ZSCAN20P17040 1043 aaPredicted RBP17.48■□□□□ 0.39
COL1A1-211ENST00000507689 CTTNQ14247 550 aaKnown RBP17.48■□□□□ 0.39
COL1A1-211ENST00000507689 TCTN1Q2MV58 587 aa17.48■□□□□ 0.39
COL1A1-211ENST00000507689 RILPL1Q5EBL4 403 aa17.48■□□□□ 0.39
COL1A1-211ENST00000507689 TMCO2Q7Z6W1 182 aaPredicted RBP17.48■□□□□ 0.39
COL1A1-211ENST00000507689 TCP11Q8WWU5 503 aa17.48■□□□□ 0.39
COL1A1-211ENST00000507689 ARNTL2Q8WYA1 636 aa17.48■□□□□ 0.39
COL1A1-211ENST00000507689 MTMR9Q96QG7 549 aa17.48■□□□□ 0.39
COL1A1-211ENST00000507689 GCOM2Q9BZD3 368 aaPredicted RBP17.48■□□□□ 0.39
COL1A1-211ENST00000507689 INO80BQ9C086 356 aaPredicted RBP17.48■□□□□ 0.39
COL1A1-211ENST00000507689 AGO3Q9H9G7 860 aaKnown RBP17.48■□□□□ 0.39
COL1A1-211ENST00000507689 RGL1Q9NZL6 768 aa17.48■□□□□ 0.39
COL1A1-211ENST00000507689 SUCLA2Q9P2R7 463 aaPredicted RBP17.48■□□□□ 0.39
COL1A1-211ENST00000507689 LAD1O00515 517 aa17.47■□□□□ 0.39
COL1A1-211ENST00000507689 ENPP3O14638 875 aa17.47■□□□□ 0.39
COL1A1-211ENST00000507689 MAFO75444 373 aaPredicted RBP17.47■□□□□ 0.39
COL1A1-211ENST00000507689 IBSPP21815 317 aaPredicted RBP17.47■□□□□ 0.39
COL1A1-211ENST00000507689 TECP42680 631 aa17.47■□□□□ 0.39
COL1A1-211ENST00000507689 TARBP2Q15633 366 aaKnown RBP17.47■□□□□ 0.39
COL1A1-211ENST00000507689 HAUS3Q68CZ6 603 aa17.47■□□□□ 0.39
COL1A1-211ENST00000507689 PLA2G4FQ68DD2 849 aa17.47■□□□□ 0.39
COL1A1-211ENST00000507689 ANO5Q75V66 913 aa17.47■□□□□ 0.39
COL1A1-211ENST00000507689 MAFAQ8NHW3 353 aaPredicted RBP17.47■□□□□ 0.39
COL1A1-211ENST00000507689 TGS1Q96RS0 853 aaKnown RBP17.47■□□□□ 0.39
COL1A1-211ENST00000507689 C1orf112Q9NSG2 853 aa17.47■□□□□ 0.39
COL1A1-211ENST00000507689 TET1Q8NFU7 2136 aa17.47■□□□□ 0.39
COL1A1-211ENST00000507689 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.46■□□□□ 0.39
COL1A1-211ENST00000507689 HSP90AA1P07900 732 aaKnown RBP17.46■□□□□ 0.39
COL1A1-211ENST00000507689 EIF4BP23588 611 aaKnown RBP17.46■□□□□ 0.39
COL1A1-211ENST00000507689 TAP1Q03518 808 aa17.46■□□□□ 0.39
COL1A1-211ENST00000507689 SPIRE1Q08AE8 756 aa17.46■□□□□ 0.39
COL1A1-211ENST00000507689 RHPN2Q8IUC4 686 aa17.46■□□□□ 0.39
COL1A1-211ENST00000507689 PSPC1Q8WXF1 523 aaKnown RBP17.46■□□□□ 0.39
COL1A1-211ENST00000507689 SAMD11Q96NU1 681 aa17.46■□□□□ 0.39
COL1A1-211ENST00000507689 SH2D3AQ9BRG2 576 aa17.46■□□□□ 0.39
COL1A1-211ENST00000507689 OSBPL7Q9BZF2 842 aa17.46■□□□□ 0.39
COL1A1-211ENST00000507689 CERS4Q9HA82 394 aa17.46■□□□□ 0.39
COL1A1-211ENST00000507689 TUFT1Q9NNX1 390 aa17.46■□□□□ 0.39
COL1A1-211ENST00000507689 ANKEF1Q9NU02 776 aa17.46■□□□□ 0.39
COL1A1-211ENST00000507689 ST3GAL5Q9UNP4 418 aa17.46■□□□□ 0.39
COL1A1-211ENST00000507689 NOC2LQ9Y3T9 749 aaKnown RBP17.46■□□□□ 0.39
COL1A1-211ENST00000507689 PCDHB7Q9Y5E2 793 aa17.46■□□□□ 0.39
COL1A1-211ENST00000507689 TMEM150BA6NC51 233 aa17.45■□□□□ 0.38
COL1A1-211ENST00000507689 POTEMA6NI47 508 aa17.45■□□□□ 0.38
COL1A1-211ENST00000507689 GPR32O75388 356 aa17.45■□□□□ 0.38
COL1A1-211ENST00000507689 SLITRK3O94933 977 aa17.45■□□□□ 0.38
COL1A1-211ENST00000507689 SFPQP23246 707 aaKnown RBP eCLIP17.45■□□□□ 0.38
COL1A1-211ENST00000507689 GPC3P51654 580 aa17.45■□□□□ 0.38
COL1A1-211ENST00000507689 NPEPPSP55786 919 aa17.45■□□□□ 0.38
COL1A1-211ENST00000507689 ZNF410Q86VK4 478 aa17.45■□□□□ 0.38
COL1A1-211ENST00000507689 NPAS4Q8IUM7 802 aa17.45■□□□□ 0.38
COL1A1-211ENST00000507689 FIBCD1Q8N539 461 aa17.45■□□□□ 0.38
COL1A1-211ENST00000507689 MTRQ99707 1265 aa17.45■□□□□ 0.38
COL1A1-211ENST00000507689 TSPYL2Q9H2G4 693 aaPredicted RBP17.45■□□□□ 0.38
COL1A1-211ENST00000507689 TMEM60Q9H2L4 133 aa17.45■□□□□ 0.38
COL1A1-211ENST00000507689 ERVK-5Q9HDB9 667 aa17.45■□□□□ 0.38
COL1A1-211ENST00000507689 MTUS1Q9ULD2 1270 aa17.45■□□□□ 0.38
COL1A1-211ENST00000507689 RWDD3Q9Y3V2 267 aa17.45■□□□□ 0.38
COL1A1-211ENST00000507689 VPS37CA5D8V6 355 aaPredicted RBP17.44■□□□□ 0.38
COL1A1-211ENST00000507689 ASAP2O43150 1006 aa17.44■□□□□ 0.38
COL1A1-211ENST00000507689 LYPLA2O95372 231 aa17.44■□□□□ 0.38
COL1A1-211ENST00000507689 XRCC6P12956 609 aaKnown RBP eCLIP17.44■□□□□ 0.38
COL1A1-211ENST00000507689 HTRA4P83105 476 aaPredicted RBP17.44■□□□□ 0.38
COL1A1-211ENST00000507689 MKRN4PQ13434 485 aaPredicted RBP17.44■□□□□ 0.38
COL1A1-211ENST00000507689 DTHD1Q6ZMT9 781 aa17.44■□□□□ 0.38
COL1A1-211ENST00000507689 SLC24A5Q71RS6 500 aa17.44■□□□□ 0.38
COL1A1-211ENST00000507689 HSCBQ8IWL3 235 aa17.44■□□□□ 0.38
COL1A1-211ENST00000507689 LINC01465Q8N7H1 131 aa17.44■□□□□ 0.38
COL1A1-211ENST00000507689 NLRP4Q96MN2 994 aa17.44■□□□□ 0.38
COL1A1-211ENST00000507689 NACC1Q96RE7 527 aa17.44■□□□□ 0.38
COL1A1-211ENST00000507689 ADAM2Q99965 735 aa17.44■□□□□ 0.38
COL1A1-211ENST00000507689 HSD17B14Q9BPX1 270 aa17.44■□□□□ 0.38
COL1A1-211ENST00000507689 CDHR5Q9HBB8 845 aa17.44■□□□□ 0.38
COL1A1-211ENST00000507689 ATP6V0A4Q9HBG4 840 aa17.44■□□□□ 0.38
COL1A1-211ENST00000507689 LRWD1Q9UFC0 647 aa17.44■□□□□ 0.38
COL1A1-211ENST00000507689 IGKV6-21A0A0C4DH24 114 aa17.43■□□□□ 0.38
COL1A1-211ENST00000507689 LCHNA4D1U4 455 aa17.43■□□□□ 0.38
COL1A1-211ENST00000507689 LINC01553A4QN01 128 aa17.43■□□□□ 0.38
COL1A1-211ENST00000507689 K7ELQ4 463 aaPredicted RBP17.43■□□□□ 0.38
COL1A1-211ENST00000507689 WNT7AO00755 349 aa17.43■□□□□ 0.38
COL1A1-211ENST00000507689 DGAT1O75907 488 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms