RNA–Protein interactions for RNA: ENST00000507638.1

VEGFC-201, Transcript of vascular endothelial growth factor C, humanhuman

TSL 3

Gene VEGFC, Length 759 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFC-201ENST00000507638 HSCBQ8IWL3 235 aa6.7□□□□□ -1.34
VEGFC-201ENST00000507638 FAM84BQ96KN1 310 aaPredicted RBP6.7□□□□□ -1.34
VEGFC-201ENST00000507638 TBC1D32Q96NH3 1257 aa6.7□□□□□ -1.34
VEGFC-201ENST00000507638 NRSN2Q9GZP1 204 aa6.7□□□□□ -1.34
VEGFC-201ENST00000507638 ANTXR1Q9H6X2 564 aa6.7□□□□□ -1.34
VEGFC-201ENST00000507638 USP40Q9NVE5 1235 aa6.7□□□□□ -1.34
VEGFC-201ENST00000507638 STOML1Q9UBI4 398 aa6.7□□□□□ -1.34
VEGFC-201ENST00000507638 HELZ2Q9BYK8 2649 aaKnown RBP6.7□□□□□ -1.34
VEGFC-201ENST00000507638 DLG5Q8TDM6 1919 aa6.7□□□□□ -1.34
VEGFC-201ENST00000507638 TET1Q8NFU7 2136 aa6.7□□□□□ -1.34
VEGFC-201ENST00000507638 DOCK2Q92608 1830 aa6.69□□□□□ -1.34
VEGFC-201ENST00000507638 LINC01553A4QN01 128 aa6.69□□□□□ -1.34
VEGFC-201ENST00000507638 MYADML2A6NDP7 307 aa6.69□□□□□ -1.34
VEGFC-201ENST00000507638 PRR5-ARHGAP8B1AHC4 643 aa6.69□□□□□ -1.34
VEGFC-201ENST00000507638 DDX3YO15523 660 aaKnown RBP6.69□□□□□ -1.34
VEGFC-201ENST00000507638 ALX3O95076 343 aa6.69□□□□□ -1.34
VEGFC-201ENST00000507638 P4HBP07237 508 aaKnown RBP6.69□□□□□ -1.34
VEGFC-201ENST00000507638 PFKMP08237 780 aa6.69□□□□□ -1.34
VEGFC-201ENST00000507638 ARP10275 920 aa6.69□□□□□ -1.34
VEGFC-201ENST00000507638 XRCC6P12956 609 aaKnown RBP eCLIP6.69□□□□□ -1.34
VEGFC-201ENST00000507638 ICAM3P32942 547 aa6.69□□□□□ -1.34
VEGFC-201ENST00000507638 BACE1P56817 501 aa6.69□□□□□ -1.34
VEGFC-201ENST00000507638 ARHGAP8P85298 464 aa6.69□□□□□ -1.34
VEGFC-201ENST00000507638 ZNF200P98182 395 aaPredicted RBP6.69□□□□□ -1.34
VEGFC-201ENST00000507638 NFE2L2Q16236 605 aa6.69□□□□□ -1.34
VEGFC-201ENST00000507638 CPSF6Q16630 551 aaKnown RBP eCLIP6.69□□□□□ -1.34
VEGFC-201ENST00000507638 PTPN21Q16825 1174 aa6.69□□□□□ -1.34
VEGFC-201ENST00000507638 TIGD5Q53EQ6 642 aa6.69□□□□□ -1.34
VEGFC-201ENST00000507638 HS1BP3Q53T59 392 aa6.69□□□□□ -1.34
VEGFC-201ENST00000507638 CLEC10AQ8IUN9 316 aa6.69□□□□□ -1.34
VEGFC-201ENST00000507638 AGGF1Q8N302 714 aaeCLIP6.69□□□□□ -1.34
VEGFC-201ENST00000507638 TBC1D22AQ8WUA7 517 aa6.69□□□□□ -1.34
VEGFC-201ENST00000507638 RPGRIP1Q96KN7 1286 aa6.69□□□□□ -1.34
VEGFC-201ENST00000507638 C12orf49Q9H741 205 aa6.69□□□□□ -1.34
VEGFC-201ENST00000507638 AS3MTQ9HBK9 375 aa6.69□□□□□ -1.34
VEGFC-201ENST00000507638 RRAGDQ9NQL2 400 aaPredicted RBP6.69□□□□□ -1.34
VEGFC-201ENST00000507638 ANKFY1Q9P2R3 1169 aa6.69□□□□□ -1.34
VEGFC-201ENST00000507638 CD207Q9UJ71 328 aa6.69□□□□□ -1.34
VEGFC-201ENST00000507638 BPTFQ12830 3046 aa6.68□□□□□ -1.34
VEGFC-201ENST00000507638 NCK2O43639 380 aa6.68□□□□□ -1.34
VEGFC-201ENST00000507638 PI15O43692 258 aa6.68□□□□□ -1.34
VEGFC-201ENST00000507638 STRNO43815 780 aa6.68□□□□□ -1.34
VEGFC-201ENST00000507638 TIAF1O95411 115 aa6.68□□□□□ -1.34
VEGFC-201ENST00000507638 SLFN14P0C7P3 912 aa6.68□□□□□ -1.34
VEGFC-201ENST00000507638 C1QTNF9P0C862 333 aa6.68□□□□□ -1.34
VEGFC-201ENST00000507638 AKR1A1P14550 325 aa6.68□□□□□ -1.34
VEGFC-201ENST00000507638 MAOBP27338 520 aa6.68□□□□□ -1.34
VEGFC-201ENST00000507638 CLCN5P51795 746 aa6.68□□□□□ -1.34
VEGFC-201ENST00000507638 CCDC173Q0VFZ6 552 aa6.68□□□□□ -1.34
VEGFC-201ENST00000507638 C20orf194Q5TEA3 1177 aa6.68□□□□□ -1.34
VEGFC-201ENST00000507638 NXPE4Q6UWF7 544 aa6.68□□□□□ -1.34
VEGFC-201ENST00000507638 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.68□□□□□ -1.34
VEGFC-201ENST00000507638 WDR63Q8IWG1 891 aa6.68□□□□□ -1.34
VEGFC-201ENST00000507638 FAM20CQ8IXL6 584 aa6.68□□□□□ -1.34
VEGFC-201ENST00000507638 C12orf50Q8NA57 414 aaPredicted RBP6.68□□□□□ -1.34
VEGFC-201ENST00000507638 PCSK9Q8NBP7 692 aaKnown RBP6.68□□□□□ -1.34
VEGFC-201ENST00000507638 GIMAP7Q8NHV1 300 aa6.68□□□□□ -1.34
VEGFC-201ENST00000507638 MAML3Q96JK9 1138 aa6.68□□□□□ -1.34
VEGFC-201ENST00000507638 UBL7Q96S82 380 aaPredicted RBP6.68□□□□□ -1.34
VEGFC-201ENST00000507638 C17orf80Q9BSJ5 609 aa6.68□□□□□ -1.34
VEGFC-201ENST00000507638 OSBPL5Q9H0X9 879 aaPredicted RBP6.68□□□□□ -1.34
VEGFC-201ENST00000507638 TRPV6Q9H1D0 765 aa6.68□□□□□ -1.34
VEGFC-201ENST00000507638 NSUN3Q9H649 340 aaKnown RBP6.68□□□□□ -1.34
VEGFC-201ENST00000507638 GRPEL1Q9HAV7 217 aa6.68□□□□□ -1.34
VEGFC-201ENST00000507638 SLC5A4Q9NY91 659 aa6.68□□□□□ -1.34
VEGFC-201ENST00000507638 BTBD7Q9P203 1132 aa6.68□□□□□ -1.34
VEGFC-201ENST00000507638 ATAD5Q96QE3 1844 aa6.68□□□□□ -1.34
VEGFC-201ENST00000507638 SYNRGQ9UMZ2 1314 aa6.68□□□□□ -1.34
VEGFC-201ENST00000507638 CDK5RAP2Q96SN8 1893 aa6.68□□□□□ -1.34
VEGFC-201ENST00000507638 C19orf81C9J6K1 198 aa6.67□□□□□ -1.34
VEGFC-201ENST00000507638 C6orf222P0C671 652 aaPredicted RBP6.67□□□□□ -1.34
VEGFC-201ENST00000507638 ZNF865P0CJ78 1059 aaPredicted RBP6.67□□□□□ -1.34
VEGFC-201ENST00000507638 EIF4BP23588 611 aaKnown RBP6.67□□□□□ -1.34
VEGFC-201ENST00000507638 CAP2P40123 477 aa6.67□□□□□ -1.34
VEGFC-201ENST00000507638 SOX4Q06945 474 aaPredicted RBP6.67□□□□□ -1.34
VEGFC-201ENST00000507638 RRP1BQ14684 758 aaKnown RBP6.67□□□□□ -1.34
VEGFC-201ENST00000507638 KRT24Q2M2I5 525 aa6.67□□□□□ -1.34
VEGFC-201ENST00000507638 SHCBP1Q8NEM2 672 aa6.67□□□□□ -1.34
VEGFC-201ENST00000507638 SNX21Q969T3 373 aa6.67□□□□□ -1.34
VEGFC-201ENST00000507638 RAD9AQ99638 391 aa6.67□□□□□ -1.34
VEGFC-201ENST00000507638 FAM83CQ9BQN1 747 aa6.67□□□□□ -1.34
VEGFC-201ENST00000507638 WDR18Q9BV38 432 aa6.67□□□□□ -1.34
VEGFC-201ENST00000507638 FTOQ9C0B1 505 aaKnown RBP eCLIP6.67□□□□□ -1.34
VEGFC-201ENST00000507638 SLKQ9H2G2 1235 aaPredicted RBP6.67□□□□□ -1.34
VEGFC-201ENST00000507638 MFSD1Q9H3U5 465 aa6.67□□□□□ -1.34
VEGFC-201ENST00000507638 RAD18Q9NS91 495 aa6.67□□□□□ -1.34
VEGFC-201ENST00000507638 HYPKQ9NX55 129 aa6.67□□□□□ -1.34
VEGFC-201ENST00000507638 GPN3Q9UHW5 284 aaPredicted RBP6.67□□□□□ -1.34
VEGFC-201ENST00000507638 AKAP2Q9Y2D5 859 aa6.67□□□□□ -1.34
VEGFC-201ENST00000507638 NBEAQ8NFP9 2946 aa6.67□□□□□ -1.34
VEGFC-201ENST00000507638 MAST3O60307 1309 aa6.67□□□□□ -1.34
VEGFC-201ENST00000507638 KIF16BQ96L93 1317 aa6.67□□□□□ -1.34
VEGFC-201ENST00000507638 COL4A3Q01955 1670 aa6.67□□□□□ -1.34
VEGFC-201ENST00000507638 FANCMQ8IYD8 2048 aa6.66□□□□□ -1.34
VEGFC-201ENST00000507638 ANKRD18BA2A2Z9 1011 aa6.66□□□□□ -1.34
VEGFC-201ENST00000507638 SRRM3A6NNA2 597 aaPredicted RBP6.66□□□□□ -1.34
VEGFC-201ENST00000507638 B4GALT4O60513 344 aa6.66□□□□□ -1.34
VEGFC-201ENST00000507638 ENTPD3O75355 529 aa6.66□□□□□ -1.34
VEGFC-201ENST00000507638 NME2P22392 152 aa6.66□□□□□ -1.34
VEGFC-201ENST00000507638 MSNP26038 577 aaKnown RBP6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms