RNA–Protein interactions for RNA: ENST00000507185.1

PFDN1-202, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 787 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-202ENST00000507185 CHPF2Q9P2E5 772 aa9.54□□□□□ -0.88
PFDN1-202ENST00000507185 ABLIM1O14639 778 aa9.53□□□□□ -0.88
PFDN1-202ENST00000507185 IRS4O14654 1257 aaPredicted RBP9.53□□□□□ -0.88
PFDN1-202ENST00000507185 MPOP05164 745 aa9.53□□□□□ -0.88
PFDN1-202ENST00000507185 PRKCAP17252 672 aa9.53□□□□□ -0.88
PFDN1-202ENST00000507185 ERVFRD-1P60508 538 aa9.53□□□□□ -0.88
PFDN1-202ENST00000507185 RPS8P62241 208 aaKnown RBP9.53□□□□□ -0.88
PFDN1-202ENST00000507185 LAPTM5Q13571 262 aa9.53□□□□□ -0.88
PFDN1-202ENST00000507185 KRT24Q2M2I5 525 aa9.53□□□□□ -0.88
PFDN1-202ENST00000507185 FBXO46Q6PJ61 603 aaPredicted RBP9.53□□□□□ -0.88
PFDN1-202ENST00000507185 LSRQ86X29 649 aaPredicted RBP9.53□□□□□ -0.88
PFDN1-202ENST00000507185 RASGRP4Q8TDF6 673 aa9.53□□□□□ -0.88
PFDN1-202ENST00000507185 BRF1Q92994 677 aa9.53□□□□□ -0.88
PFDN1-202ENST00000507185 CHMP4AQ9BY43 222 aa9.53□□□□□ -0.88
PFDN1-202ENST00000507185 MYOZ2Q9NPC6 264 aa9.53□□□□□ -0.88
PFDN1-202ENST00000507185 GINM1Q9NU53 330 aa9.53□□□□□ -0.88
PFDN1-202ENST00000507185 MBD1Q9UIS9 605 aaPredicted RBP9.53□□□□□ -0.88
PFDN1-202ENST00000507185 TRPM7Q96QT4 1865 aa9.53□□□□□ -0.88
PFDN1-202ENST00000507185 VIL1P09327 827 aaKnown RBP9.52□□□□□ -0.89
PFDN1-202ENST00000507185 VIPR1P32241 457 aa9.52□□□□□ -0.89
PFDN1-202ENST00000507185 ZNF445P59923 1031 aa9.52□□□□□ -0.89
PFDN1-202ENST00000507185 FKBP1BP68106 108 aa9.52□□□□□ -0.89
PFDN1-202ENST00000507185 CYP4F8P98187 520 aa9.52□□□□□ -0.89
PFDN1-202ENST00000507185 SREBF2Q12772 1141 aa9.52□□□□□ -0.89
PFDN1-202ENST00000507185 ZNF385BQ569K4 471 aa9.52□□□□□ -0.89
PFDN1-202ENST00000507185 RTP2Q5QGT7 225 aa9.52□□□□□ -0.89
PFDN1-202ENST00000507185 LCE4AQ5TA78 99 aa9.52□□□□□ -0.89
PFDN1-202ENST00000507185 CCDC81Q6ZN84 652 aa9.52□□□□□ -0.89
PFDN1-202ENST00000507185 LRP10Q7Z4F1 713 aa9.52□□□□□ -0.89
PFDN1-202ENST00000507185 NUP43Q8NFH3 380 aa9.52□□□□□ -0.89
PFDN1-202ENST00000507185 SLC12A9Q9BXP2 914 aa9.52□□□□□ -0.89
PFDN1-202ENST00000507185 ZNF214Q9UL59 606 aaPredicted RBP9.52□□□□□ -0.89
PFDN1-202ENST00000507185 TRIM17Q9Y577 477 aa9.52□□□□□ -0.89
PFDN1-202ENST00000507185 KCTD3Q9Y597 815 aa9.52□□□□□ -0.89
PFDN1-202ENST00000507185 H0Y8X5 98 aa9.51□□□□□ -0.89
PFDN1-202ENST00000507185 RFXAPO00287 272 aa9.51□□□□□ -0.89
PFDN1-202ENST00000507185 SASH1O94885 1247 aa9.51□□□□□ -0.89
PFDN1-202ENST00000507185 CD247P20963 164 aa9.51□□□□□ -0.89
PFDN1-202ENST00000507185 NOP2P46087 812 aaKnown RBP9.51□□□□□ -0.89
PFDN1-202ENST00000507185 YBX1P67809 324 aaKnown RBP9.51□□□□□ -0.89
PFDN1-202ENST00000507185 LMOD3Q0VAK6 560 aa9.51□□□□□ -0.89
PFDN1-202ENST00000507185 HABP4Q5JVS0 413 aaKnown RBP9.51□□□□□ -0.89
PFDN1-202ENST00000507185 CKAP2LQ8IYA6 745 aa9.51□□□□□ -0.89
PFDN1-202ENST00000507185 TMEM52Q8NDY8 209 aa9.51□□□□□ -0.89
PFDN1-202ENST00000507185 AGBL3Q8NEM8 1001 aa9.51□□□□□ -0.89
PFDN1-202ENST00000507185 PLBD2Q8NHP8 589 aa9.51□□□□□ -0.89
PFDN1-202ENST00000507185 PLEKHF1Q96S99 279 aa9.51□□□□□ -0.89
PFDN1-202ENST00000507185 MXD3Q9BW11 206 aa9.51□□□□□ -0.89
PFDN1-202ENST00000507185 EFR3BQ9Y2G0 817 aa9.51□□□□□ -0.89
PFDN1-202ENST00000507185 FHOD1Q9Y613 1164 aa9.51□□□□□ -0.89
PFDN1-202ENST00000507185 MRPL42Q9Y6G3 142 aaKnown RBP9.51□□□□□ -0.89
PFDN1-202ENST00000507185 DUOX1Q9NRD9 1551 aa9.5□□□□□ -0.89
PFDN1-202ENST00000507185 LAMB4A4D0S4 1761 aa9.5□□□□□ -0.89
PFDN1-202ENST00000507185 A0A1W2PQ27 194 aa9.5□□□□□ -0.89
PFDN1-202ENST00000507185 A0A1W2PQ64 194 aa9.5□□□□□ -0.89
PFDN1-202ENST00000507185 A0A1W2PQC6 194 aa9.5□□□□□ -0.89
PFDN1-202ENST00000507185 A0A1W2PQD8 194 aa9.5□□□□□ -0.89
PFDN1-202ENST00000507185 ITGA4P13612 1032 aa9.5□□□□□ -0.89
PFDN1-202ENST00000507185 ZNF280AP59817 542 aaPredicted RBP9.5□□□□□ -0.89
PFDN1-202ENST00000507185 SF3B3Q15393 1217 aaKnown RBP9.5□□□□□ -0.89
PFDN1-202ENST00000507185 HLA-DQA1Q5Y7H0 255 aa9.5□□□□□ -0.89
PFDN1-202ENST00000507185 ARMC9Q7Z3E5 817 aa9.5□□□□□ -0.89
PFDN1-202ENST00000507185 FIBCD1Q8N539 461 aa9.5□□□□□ -0.89
PFDN1-202ENST00000507185 GPATCH3Q96I76 525 aa9.5□□□□□ -0.89
PFDN1-202ENST00000507185 JMJD8Q96S16 334 aa9.5□□□□□ -0.89
PFDN1-202ENST00000507185 IMPACTQ9P2X3 320 aa9.5□□□□□ -0.89
PFDN1-202ENST00000507185 ACSL6Q9UKU0 697 aa9.5□□□□□ -0.89
PFDN1-202ENST00000507185 SF3B6Q9Y3B4 125 aaKnown RBP9.5□□□□□ -0.89
PFDN1-202ENST00000507185 ZNF451Q9Y4E5 1061 aa9.5□□□□□ -0.89
PFDN1-202ENST00000507185 IRAK3Q9Y616 596 aa9.5□□□□□ -0.89
PFDN1-202ENST00000507185 SLC12A7Q9Y666 1083 aa9.5□□□□□ -0.89
PFDN1-202ENST00000507185 SSBP05455 408 aaKnown RBP eCLIP9.49□□□□□ -0.89
PFDN1-202ENST00000507185 TMEM62Q0P6H9 643 aa9.49□□□□□ -0.89
PFDN1-202ENST00000507185 SERINC3Q13530 473 aa9.49□□□□□ -0.89
PFDN1-202ENST00000507185 RAB3GAP1Q15042 981 aa9.49□□□□□ -0.89
PFDN1-202ENST00000507185 CCDC152Q4G0S7 254 aa9.49□□□□□ -0.89
PFDN1-202ENST00000507185 JAMLQ86YT9 394 aa9.49□□□□□ -0.89
PFDN1-202ENST00000507185 ANKRD18AQ8IVF6 992 aa9.49□□□□□ -0.89
PFDN1-202ENST00000507185 CCDC146Q8IYE0 955 aa9.49□□□□□ -0.89
PFDN1-202ENST00000507185 MRFAP1L1Q96HT8 127 aa9.49□□□□□ -0.89
PFDN1-202ENST00000507185 SEC16BQ96JE7 1060 aa9.49□□□□□ -0.89
PFDN1-202ENST00000507185 SIGLEC10Q96LC7 697 aa9.49□□□□□ -0.89
PFDN1-202ENST00000507185 MYD88Q99836 296 aa9.49□□□□□ -0.89
PFDN1-202ENST00000507185 R3HDMLQ9H3Y0 253 aa9.49□□□□□ -0.89
PFDN1-202ENST00000507185 CNTD2Q9H8S5 307 aa9.49□□□□□ -0.89
PFDN1-202ENST00000507185 FZD1Q9UP38 647 aa9.49□□□□□ -0.89
PFDN1-202ENST00000507185 SOX9P48436 509 aa9.48□□□□□ -0.89
PFDN1-202ENST00000507185 NASPP49321 788 aaPredicted RBP9.48□□□□□ -0.89
PFDN1-202ENST00000507185 SSPNQ14714 243 aa9.48□□□□□ -0.89
PFDN1-202ENST00000507185 ISCA1Q9BUE6 129 aa9.48□□□□□ -0.89
PFDN1-202ENST00000507185 SRRTQ9BXP5 876 aaKnown RBP9.48□□□□□ -0.89
PFDN1-202ENST00000507185 NOL6Q9H6R4 1146 aaKnown RBP9.48□□□□□ -0.89
PFDN1-202ENST00000507185 KLHL14Q9P2G3 628 aa9.48□□□□□ -0.89
PFDN1-202ENST00000507185 XDHP47989 1333 aa9.48□□□□□ -0.89
PFDN1-202ENST00000507185 TNRC18O15417 2968 aaPredicted RBP9.47□□□□□ -0.89
PFDN1-202ENST00000507185 NUDT19A8MXV4 375 aa9.47□□□□□ -0.89
PFDN1-202ENST00000507185 N4BP3O15049 544 aa9.47□□□□□ -0.89
PFDN1-202ENST00000507185 TM4SF4P48230 202 aa9.47□□□□□ -0.89
PFDN1-202ENST00000507185 EPHB3P54753 998 aa9.47□□□□□ -0.89
PFDN1-202ENST00000507185 TCERG1LQ5VWI1 586 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms