RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 UBE3AQ05086 875 aa16.25■□□□□ 0.19
HMGCS1-203ENST00000507004 TBC1D8BQ0IIM8 1120 aa16.25■□□□□ 0.19
HMGCS1-203ENST00000507004 TCEAL5Q5H9L2 206 aa16.25■□□□□ 0.19
HMGCS1-203ENST00000507004 EFCAB12Q6NXP0 572 aa16.25■□□□□ 0.19
HMGCS1-203ENST00000507004 NEK9Q8TD19 979 aa16.25■□□□□ 0.19
HMGCS1-203ENST00000507004 FAM20AQ96MK3 541 aa16.25■□□□□ 0.19
HMGCS1-203ENST00000507004 ADAM2Q99965 735 aa16.25■□□□□ 0.19
HMGCS1-203ENST00000507004 TMX1Q9H3N1 280 aa16.25■□□□□ 0.19
HMGCS1-203ENST00000507004 ATP6V0A4Q9HBG4 840 aa16.25■□□□□ 0.19
HMGCS1-203ENST00000507004 TMEM161AQ9NX61 479 aa16.25■□□□□ 0.19
HMGCS1-203ENST00000507004 AKT3Q9Y243 479 aa16.25■□□□□ 0.19
HMGCS1-203ENST00000507004 PPME1Q9Y570 386 aa16.25■□□□□ 0.19
HMGCS1-203ENST00000507004 PCDHB12Q9Y5F1 795 aa16.25■□□□□ 0.19
HMGCS1-203ENST00000507004 TCF20Q9UGU0 1960 aaKnown RBP16.25■□□□□ 0.19
HMGCS1-203ENST00000507004 EVPLQ92817 2033 aa16.24■□□□□ 0.19
HMGCS1-203ENST00000507004 TRANK1O15050 2925 aa16.24■□□□□ 0.19
HMGCS1-203ENST00000507004 VCANP13611 3396 aa16.24■□□□□ 0.19
HMGCS1-203ENST00000507004 CARNS1A5YM72 827 aa16.24■□□□□ 0.19
HMGCS1-203ENST00000507004 C9IYK1 514 aa16.24■□□□□ 0.19
HMGCS1-203ENST00000507004 ADAMTS3O15072 1205 aa16.24■□□□□ 0.19
HMGCS1-203ENST00000507004 TBX3O15119 743 aa16.24■□□□□ 0.19
HMGCS1-203ENST00000507004 PPFIA3O75145 1194 aa16.24■□□□□ 0.19
HMGCS1-203ENST00000507004 GPR32O75388 356 aa16.24■□□□□ 0.19
HMGCS1-203ENST00000507004 EIF4BP23588 611 aaKnown RBP16.24■□□□□ 0.19
HMGCS1-203ENST00000507004 DNM2P50570 870 aa16.24■□□□□ 0.19
HMGCS1-203ENST00000507004 STK3Q13188 491 aa16.24■□□□□ 0.19
HMGCS1-203ENST00000507004 KIZQ2M2Z5 673 aa16.24■□□□□ 0.19
HMGCS1-203ENST00000507004 TMEM266Q2M3C6 531 aa16.24■□□□□ 0.19
HMGCS1-203ENST00000507004 PPP4R3AQ6IN85 833 aa16.24■□□□□ 0.19
HMGCS1-203ENST00000507004 NEK8Q86SG6 692 aa16.24■□□□□ 0.19
HMGCS1-203ENST00000507004 LINC01465Q8N7H1 131 aa16.24■□□□□ 0.19
HMGCS1-203ENST00000507004 OSMRQ99650 979 aa16.24■□□□□ 0.19
HMGCS1-203ENST00000507004 NIFKQ9BYG3 293 aaKnown RBP16.24■□□□□ 0.19
HMGCS1-203ENST00000507004 INO80BQ9C086 356 aaPredicted RBP16.24■□□□□ 0.19
HMGCS1-203ENST00000507004 UNC45AQ9H3U1 944 aa16.24■□□□□ 0.19
HMGCS1-203ENST00000507004 BRMS1Q9HCU9 246 aa16.24■□□□□ 0.19
HMGCS1-203ENST00000507004 DDX25Q9UHL0 483 aaKnown RBP16.24■□□□□ 0.19
HMGCS1-203ENST00000507004 PLAGL2Q9UPG8 496 aa16.24■□□□□ 0.19
HMGCS1-203ENST00000507004 MRPL42Q9Y6G3 142 aaKnown RBP16.24■□□□□ 0.19
HMGCS1-203ENST00000507004 GRM6O15303 877 aa16.23■□□□□ 0.19
HMGCS1-203ENST00000507004 CHMP2AO43633 222 aa16.23■□□□□ 0.19
HMGCS1-203ENST00000507004 EDIL3O43854 480 aa16.23■□□□□ 0.19
HMGCS1-203ENST00000507004 ZNF862O60290 1169 aa16.23■□□□□ 0.19
HMGCS1-203ENST00000507004 NLRP11P59045 1033 aaKnown RBP16.23■□□□□ 0.19
HMGCS1-203ENST00000507004 FAM189BP81408 668 aa16.23■□□□□ 0.19
HMGCS1-203ENST00000507004 SCRN1Q12765 414 aa16.23■□□□□ 0.19
HMGCS1-203ENST00000507004 PTCRAQ6ISU1 281 aaPredicted RBP16.23■□□□□ 0.19
HMGCS1-203ENST00000507004 PDE12Q6L8Q7 609 aaKnown RBP16.23■□□□□ 0.19
HMGCS1-203ENST00000507004 B3GNT9Q6UX72 402 aa16.23■□□□□ 0.19
HMGCS1-203ENST00000507004 FAM228AQ86W67 206 aa16.23■□□□□ 0.19
HMGCS1-203ENST00000507004 TMEM40Q8WWA1 233 aa16.23■□□□□ 0.19
HMGCS1-203ENST00000507004 PHF20Q9BVI0 1012 aa16.23■□□□□ 0.19
HMGCS1-203ENST00000507004 DACT1Q9NYF0 836 aa16.23■□□□□ 0.19
HMGCS1-203ENST00000507004 PRKAG3Q9UGI9 489 aa16.23■□□□□ 0.19
HMGCS1-203ENST00000507004 LOXHD1Q8IVV2 1947 aa16.22■□□□□ 0.19
HMGCS1-203ENST00000507004 GRXCR2A6NFK2 248 aa16.22■□□□□ 0.19
HMGCS1-203ENST00000507004 TDP2O95551 362 aa16.22■□□□□ 0.19
HMGCS1-203ENST00000507004 VTNP04004 478 aa16.22■□□□□ 0.19
HMGCS1-203ENST00000507004 CLCN3P51790 818 aa16.22■□□□□ 0.19
HMGCS1-203ENST00000507004 PSMC5P62195 406 aa16.22■□□□□ 0.19
HMGCS1-203ENST00000507004 TARBP2Q15633 366 aaKnown RBP16.22■□□□□ 0.19
HMGCS1-203ENST00000507004 NPY5RQ15761 445 aa16.22■□□□□ 0.19
HMGCS1-203ENST00000507004 TRMT1LQ7Z2T5 733 aaKnown RBP16.22■□□□□ 0.19
HMGCS1-203ENST00000507004 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.22■□□□□ 0.19
HMGCS1-203ENST00000507004 ETNPPLQ8TBG4 499 aa16.22■□□□□ 0.19
HMGCS1-203ENST00000507004 SCLT1Q96NL6 688 aa16.22■□□□□ 0.19
HMGCS1-203ENST00000507004 NECAB3Q96P71 396 aaPredicted RBP16.22■□□□□ 0.19
HMGCS1-203ENST00000507004 UIMC1Q96RL1 719 aa16.22■□□□□ 0.19
HMGCS1-203ENST00000507004 GCOM2Q9BZD3 368 aaPredicted RBP16.22■□□□□ 0.19
HMGCS1-203ENST00000507004 CDHR5Q9HBB8 845 aa16.22■□□□□ 0.19
HMGCS1-203ENST00000507004 MARCH6O60337 910 aa16.21■□□□□ 0.19
HMGCS1-203ENST00000507004 SKIP12755 728 aa16.21■□□□□ 0.19
HMGCS1-203ENST00000507004 DARSP14868 501 aaKnown RBP16.21■□□□□ 0.19
HMGCS1-203ENST00000507004 LAG3P18627 525 aa16.21■□□□□ 0.19
HMGCS1-203ENST00000507004 GPC3P51654 580 aa16.21■□□□□ 0.19
HMGCS1-203ENST00000507004 PPP2R5CQ13362 524 aa16.21■□□□□ 0.19
HMGCS1-203ENST00000507004 DSC3Q14574 896 aa16.21■□□□□ 0.19
HMGCS1-203ENST00000507004 INF2Q27J81 1249 aa16.21■□□□□ 0.19
HMGCS1-203ENST00000507004 CTC1Q2NKJ3 1217 aa16.21■□□□□ 0.19
HMGCS1-203ENST00000507004 LETM2Q2VYF4 491 aa16.21■□□□□ 0.19
HMGCS1-203ENST00000507004 SPOUT1Q5T280 376 aaKnown RBP16.21■□□□□ 0.19
HMGCS1-203ENST00000507004 ZNF410Q86VK4 478 aa16.21■□□□□ 0.19
HMGCS1-203ENST00000507004 FAM178BQ8IXR5 827 aa16.21■□□□□ 0.19
HMGCS1-203ENST00000507004 SLFN12Q8IYM2 578 aa16.21■□□□□ 0.19
HMGCS1-203ENST00000507004 ABI1Q8IZP0 508 aa16.21■□□□□ 0.19
HMGCS1-203ENST00000507004 SPPL3Q8TCT6 385 aa16.21■□□□□ 0.19
HMGCS1-203ENST00000507004 TMEM117Q9H0C3 514 aa16.21■□□□□ 0.19
HMGCS1-203ENST00000507004 ADAMTS10Q9H324 1103 aa16.21■□□□□ 0.19
HMGCS1-203ENST00000507004 CHST12Q9NRB3 414 aa16.21■□□□□ 0.19
HMGCS1-203ENST00000507004 CLDND1Q9NY35 253 aa16.21■□□□□ 0.19
HMGCS1-203ENST00000507004 SEPT9Q9UHD8 586 aaPredicted RBP16.21■□□□□ 0.19
HMGCS1-203ENST00000507004 TBKBP1A7MCY6 615 aa16.2■□□□□ 0.18
HMGCS1-203ENST00000507004 MGEA5O60502 916 aa16.2■□□□□ 0.18
HMGCS1-203ENST00000507004 BAG4O95429 457 aaKnown RBP16.2■□□□□ 0.18
HMGCS1-203ENST00000507004 EOMESO95936 686 aa16.2■□□□□ 0.18
HMGCS1-203ENST00000507004 ITGB1P05556 798 aa16.2■□□□□ 0.18
HMGCS1-203ENST00000507004 PPM1AP35813 382 aa16.2■□□□□ 0.18
HMGCS1-203ENST00000507004 QARSP47897 775 aaKnown RBP16.2■□□□□ 0.18
HMGCS1-203ENST00000507004 PAN2Q504Q3 1202 aaKnown RBP16.2■□□□□ 0.18
HMGCS1-203ENST00000507004 EP400NLQ6ZTU2 488 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms