RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 ANKRD62A6NC57 917 aa4.08□□□□□ -1.76
GYPB-207ENST00000506679 PRPF6O94906 941 aaKnown RBP4.08□□□□□ -1.76
GYPB-207ENST00000506679 CSF2RBP32927 897 aa4.08□□□□□ -1.76
GYPB-207ENST00000506679 SESN3P58005 492 aa4.08□□□□□ -1.76
GYPB-207ENST00000506679 RGL3Q3MIN7 710 aa4.08□□□□□ -1.76
GYPB-207ENST00000506679 RNF219Q5W0B1 726 aaPredicted RBP4.08□□□□□ -1.76
GYPB-207ENST00000506679 MCTP2Q6DN12 878 aa4.08□□□□□ -1.76
GYPB-207ENST00000506679 KIAA1841Q6NSI8 718 aa4.08□□□□□ -1.76
GYPB-207ENST00000506679 RASSF3Q86WH2 238 aa4.08□□□□□ -1.76
GYPB-207ENST00000506679 SPATS2Q86XZ4 545 aaKnown RBP4.08□□□□□ -1.76
GYPB-207ENST00000506679 KLHL36Q8N4N3 616 aa4.08□□□□□ -1.76
GYPB-207ENST00000506679 SYT8Q8NBV8 401 aa4.08□□□□□ -1.76
GYPB-207ENST00000506679 KRTAP4-9Q9BYQ8 210 aa4.08□□□□□ -1.76
GYPB-207ENST00000506679 TMEM168Q9H0V1 697 aa4.08□□□□□ -1.76
GYPB-207ENST00000506679 POFUT1Q9H488 388 aa4.08□□□□□ -1.76
GYPB-207ENST00000506679 PCDH12Q9NPG4 1184 aa4.08□□□□□ -1.76
GYPB-207ENST00000506679 FTSJ1Q9UET6 329 aa4.08□□□□□ -1.76
GYPB-207ENST00000506679 MCM8Q9UJA3 840 aa4.08□□□□□ -1.76
GYPB-207ENST00000506679 DENND2AQ9ULE3 1009 aa4.08□□□□□ -1.76
GYPB-207ENST00000506679 A0A0G2JNJ9 132 aa4.07□□□□□ -1.76
GYPB-207ENST00000506679 LCHNA4D1U4 455 aa4.07□□□□□ -1.76
GYPB-207ENST00000506679 MROH6A6NGR9 719 aa4.07□□□□□ -1.76
GYPB-207ENST00000506679 B4GALT3O60512 393 aa4.07□□□□□ -1.76
GYPB-207ENST00000506679 CDKN1CP49918 316 aaPredicted RBP4.07□□□□□ -1.76
GYPB-207ENST00000506679 MANFP55145 182 aaKnown RBP4.07□□□□□ -1.76
GYPB-207ENST00000506679 GJA9P57773 515 aa4.07□□□□□ -1.76
GYPB-207ENST00000506679 NFATC3Q12968 1075 aa4.07□□□□□ -1.76
GYPB-207ENST00000506679 PTPROQ16827 1216 aa4.07□□□□□ -1.76
GYPB-207ENST00000506679 WDR72Q3MJ13 1102 aa4.07□□□□□ -1.76
GYPB-207ENST00000506679 ZBTB41Q5SVQ8 909 aa4.07□□□□□ -1.76
GYPB-207ENST00000506679 PRAMEF9Q5VWM5 478 aa4.07□□□□□ -1.76
GYPB-207ENST00000506679 TRIM68Q6AZZ1 485 aa4.07□□□□□ -1.76
GYPB-207ENST00000506679 GRAMD4Q6IC98 578 aa4.07□□□□□ -1.76
GYPB-207ENST00000506679 UNQ6494/PRO21346Q6UXR6 183 aa4.07□□□□□ -1.76
GYPB-207ENST00000506679 FRMD7Q6ZUT3 714 aa4.07□□□□□ -1.76
GYPB-207ENST00000506679 NECAB2Q7Z6G3 386 aa4.07□□□□□ -1.76
GYPB-207ENST00000506679 CXorf67Q86X51 503 aaPredicted RBP4.07□□□□□ -1.76
GYPB-207ENST00000506679 OR5AN1Q8NGI8 311 aa4.07□□□□□ -1.76
GYPB-207ENST00000506679 WDR66Q8TBY9 1149 aa4.07□□□□□ -1.76
GYPB-207ENST00000506679 LCORQ96JN0 433 aaPredicted RBP4.07□□□□□ -1.76
GYPB-207ENST00000506679 TUBGCP5Q96RT8 1024 aa4.07□□□□□ -1.76
GYPB-207ENST00000506679 MYL10Q9BUA6 226 aa4.07□□□□□ -1.76
GYPB-207ENST00000506679 KCMF1Q9P0J7 381 aa4.07□□□□□ -1.76
GYPB-207ENST00000506679 Q9UFV3 132 aa4.07□□□□□ -1.76
GYPB-207ENST00000506679 MSRAQ9UJ68 235 aa4.07□□□□□ -1.76
GYPB-207ENST00000506679 A0A0A6YYJ9 748 aa4.06□□□□□ -1.76
GYPB-207ENST00000506679 KDM1AO60341 852 aa4.06□□□□□ -1.76
GYPB-207ENST00000506679 PRKD3O94806 890 aa4.06□□□□□ -1.76
GYPB-207ENST00000506679 PFKMP08237 780 aa4.06□□□□□ -1.76
GYPB-207ENST00000506679 BMP7P18075 431 aa4.06□□□□□ -1.76
GYPB-207ENST00000506679 ADCY8P40145 1251 aa4.06□□□□□ -1.76
GYPB-207ENST00000506679 BCAR1P56945 870 aa4.06□□□□□ -1.76
GYPB-207ENST00000506679 ERVK-21P61565 698 aa4.06□□□□□ -1.76
GYPB-207ENST00000506679 TMPRSS15P98073 1019 aa4.06□□□□□ -1.76
GYPB-207ENST00000506679 ADCY2Q08462 1091 aa4.06□□□□□ -1.76
GYPB-207ENST00000506679 MAP3K12Q12852 859 aa4.06□□□□□ -1.76
GYPB-207ENST00000506679 FZD5Q13467 585 aa4.06□□□□□ -1.76
GYPB-207ENST00000506679 NOLC1Q14978 699 aaKnown RBP eCLIP4.06□□□□□ -1.76
GYPB-207ENST00000506679 PDCD1Q15116 288 aa4.06□□□□□ -1.76
GYPB-207ENST00000506679 NT5DC1Q5TFE4 455 aa4.06□□□□□ -1.76
GYPB-207ENST00000506679 TIGD7Q6NT04 549 aaPredicted RBP4.06□□□□□ -1.76
GYPB-207ENST00000506679 ESPNLQ6ZVH7 1005 aa4.06□□□□□ -1.76
GYPB-207ENST00000506679 BMP8AQ7Z5Y6 402 aa4.06□□□□□ -1.76
GYPB-207ENST00000506679 FRMD5Q7Z6J6 570 aa4.06□□□□□ -1.76
GYPB-207ENST00000506679 SLC41A1Q8IVJ1 513 aa4.06□□□□□ -1.76
GYPB-207ENST00000506679 ZCRB1Q8TBF4 217 aaKnown RBP4.06□□□□□ -1.76
GYPB-207ENST00000506679 ORAI2Q96SN7 254 aa4.06□□□□□ -1.76
GYPB-207ENST00000506679 WNT8AQ9H1J5 351 aa4.06□□□□□ -1.76
GYPB-207ENST00000506679 BARX1Q9HBU1 254 aaPredicted RBP4.06□□□□□ -1.76
GYPB-207ENST00000506679 VTA1Q9NP79 307 aa4.06□□□□□ -1.76
GYPB-207ENST00000506679 PARD6AQ9NPB6 346 aa4.06□□□□□ -1.76
GYPB-207ENST00000506679 TOPORSQ9NS56 1045 aaPredicted RBP4.06□□□□□ -1.76
GYPB-207ENST00000506679 RAPGEFL1Q9UHV5 662 aa4.06□□□□□ -1.76
GYPB-207ENST00000506679 TMPRSS11EQ9UL52 423 aa4.06□□□□□ -1.76
GYPB-207ENST00000506679 PPP2R3BQ9Y5P8 575 aa4.06□□□□□ -1.76
GYPB-207ENST00000506679 OTOL1A6NHN0 477 aaPredicted RBP4.05□□□□□ -1.76
GYPB-207ENST00000506679 OPHN1O60890 802 aa4.05□□□□□ -1.76
GYPB-207ENST00000506679 SASH1O94885 1247 aa4.05□□□□□ -1.76
GYPB-207ENST00000506679 CYP1A1P04798 512 aaPredicted RBP4.05□□□□□ -1.76
GYPB-207ENST00000506679 ZNF888P0CJ79 500 aaPredicted RBP4.05□□□□□ -1.76
GYPB-207ENST00000506679 CDK11BP21127 795 aaKnown RBP4.05□□□□□ -1.76
GYPB-207ENST00000506679 ANTXR2P58335 489 aa4.05□□□□□ -1.76
GYPB-207ENST00000506679 KIAA2012Q0VF49 1180 aa4.05□□□□□ -1.76
GYPB-207ENST00000506679 FAPQ12884 760 aa4.05□□□□□ -1.76
GYPB-207ENST00000506679 USP10Q14694 798 aaKnown RBP4.05□□□□□ -1.76
GYPB-207ENST00000506679 ZFYVE27Q5T4F4 411 aa4.05□□□□□ -1.76
GYPB-207ENST00000506679 TTLL10Q6ZVT0 673 aa4.05□□□□□ -1.76
GYPB-207ENST00000506679 LARP4Q71RC2 724 aaKnown RBP eCLIP4.05□□□□□ -1.76
GYPB-207ENST00000506679 OTOP2Q7RTS6 562 aa4.05□□□□□ -1.76
GYPB-207ENST00000506679 HDGFL2Q7Z4V5 671 aaPredicted RBP4.05□□□□□ -1.76
GYPB-207ENST00000506679 LYSMD2Q8IV50 215 aa4.05□□□□□ -1.76
GYPB-207ENST00000506679 RPUSD2Q8IZ73 545 aaKnown RBP4.05□□□□□ -1.76
GYPB-207ENST00000506679 PRPF38AQ8NAV1 312 aaKnown RBP4.05□□□□□ -1.76
GYPB-207ENST00000506679 ATL2Q8NHH9 583 aa4.05□□□□□ -1.76
GYPB-207ENST00000506679 PPP1R14CQ8TAE6 165 aa4.05□□□□□ -1.76
GYPB-207ENST00000506679 FEZF2Q8TBJ5 459 aa4.05□□□□□ -1.76
GYPB-207ENST00000506679 COG1Q8WTW3 980 aa4.05□□□□□ -1.76
GYPB-207ENST00000506679 NKD2Q969F2 451 aaPredicted RBP4.05□□□□□ -1.76
GYPB-207ENST00000506679 CARD11Q9BXL7 1154 aa4.05□□□□□ -1.76
GYPB-207ENST00000506679 KRTAP4-2Q9BYR5 136 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms