RNA–Protein interactions for RNA: ENST00000506443.5

COPS4-204, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 4

Gene COPS4, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-204ENST00000506443 CHD1LQ86WJ1 897 aa10.27□□□□□ -0.77
COPS4-204ENST00000506443 TMEM173Q86WV6 379 aaPredicted RBP10.27□□□□□ -0.77
COPS4-204ENST00000506443 SEPT1Q8WYJ6 367 aa10.27□□□□□ -0.77
COPS4-204ENST00000506443 MYL10Q9BUA6 226 aa10.27□□□□□ -0.77
COPS4-204ENST00000506443 FTHL17Q9BXU8 183 aa10.27□□□□□ -0.77
COPS4-204ENST00000506443 LRFN2Q9ULH4 789 aa10.27□□□□□ -0.77
COPS4-204ENST00000506443 DOCK8Q8NF50 2099 aa10.26□□□□□ -0.77
COPS4-204ENST00000506443 RRN3P2A6NIE6 340 aa10.26□□□□□ -0.77
COPS4-204ENST00000506443 HIP1O00291 1037 aa10.26□□□□□ -0.77
COPS4-204ENST00000506443 IFIT3O14879 490 aaKnown RBP10.26□□□□□ -0.77
COPS4-204ENST00000506443 IGHDP01880 384 aa10.26□□□□□ -0.77
COPS4-204ENST00000506443 CYP21A2P08686 494 aa10.26□□□□□ -0.77
COPS4-204ENST00000506443 EPCAMP16422 314 aa10.26□□□□□ -0.77
COPS4-204ENST00000506443 SARSP49591 514 aaKnown RBP10.26□□□□□ -0.77
COPS4-204ENST00000506443 NUCB1Q02818 461 aa10.26□□□□□ -0.77
COPS4-204ENST00000506443 IER5Q5VY09 327 aa10.26□□□□□ -0.77
COPS4-204ENST00000506443 TMEM184AQ6ZMB5 413 aa10.26□□□□□ -0.77
COPS4-204ENST00000506443 NLRX1Q86UT6 975 aa10.26□□□□□ -0.77
COPS4-204ENST00000506443 CCDC105Q8IYK2 499 aa10.26□□□□□ -0.77
COPS4-204ENST00000506443 IGDCC4Q8TDY8 1250 aa10.26□□□□□ -0.77
COPS4-204ENST00000506443 BCL7CQ8WUZ0 217 aaPredicted RBP10.26□□□□□ -0.77
COPS4-204ENST00000506443 GLG1Q92896 1179 aa10.26□□□□□ -0.77
COPS4-204ENST00000506443 GPRASP2Q96D09 838 aa10.26□□□□□ -0.77
COPS4-204ENST00000506443 PGBD1Q96JS3 809 aa10.26□□□□□ -0.77
COPS4-204ENST00000506443 ZNF668Q96K58 619 aaPredicted RBP10.26□□□□□ -0.77
COPS4-204ENST00000506443 HS3ST6Q96QI5 342 aa10.26□□□□□ -0.77
COPS4-204ENST00000506443 ADAM2Q99965 735 aa10.26□□□□□ -0.77
COPS4-204ENST00000506443 MFSD1Q9H3U5 465 aa10.26□□□□□ -0.77
COPS4-204ENST00000506443 SMARCAD1Q9H4L7 1026 aa10.26□□□□□ -0.77
COPS4-204ENST00000506443 UBIAD1Q9Y5Z9 338 aa10.26□□□□□ -0.77
COPS4-204ENST00000506443 CFAP47Q6ZTR5 3102 aa10.26□□□□□ -0.77
COPS4-204ENST00000506443 CACNA1IQ9P0X4 2223 aa10.25□□□□□ -0.77
COPS4-204ENST00000506443 hCG_1642624A0A1W2PR95 340 aa10.25□□□□□ -0.77
COPS4-204ENST00000506443 C9IYK1 514 aa10.25□□□□□ -0.77
COPS4-204ENST00000506443 NT5C1B-RDH14C9J2C7 533 aa10.25□□□□□ -0.77
COPS4-204ENST00000506443 B4GALT3O60512 393 aa10.25□□□□□ -0.77
COPS4-204ENST00000506443 CLASP2O75122 1294 aaKnown RBP10.25□□□□□ -0.77
COPS4-204ENST00000506443 SMARCA1P28370 1054 aa10.25□□□□□ -0.77
COPS4-204ENST00000506443 ANTXR2P58335 489 aa10.25□□□□□ -0.77
COPS4-204ENST00000506443 DGLUCYQ7Z3D6 616 aa10.25□□□□□ -0.77
COPS4-204ENST00000506443 FAM228AQ86W67 206 aa10.25□□□□□ -0.77
COPS4-204ENST00000506443 EFCAB3Q8N7B9 438 aa10.25□□□□□ -0.77
COPS4-204ENST00000506443 SMARCC2Q8TAQ2 1214 aa10.25□□□□□ -0.77
COPS4-204ENST00000506443 RSAD2Q8WXG1 361 aa10.25□□□□□ -0.77
COPS4-204ENST00000506443 MRPS27Q92552 414 aaKnown RBP10.25□□□□□ -0.77
COPS4-204ENST00000506443 MAP3K14Q99558 947 aa10.25□□□□□ -0.77
COPS4-204ENST00000506443 OSMRQ99650 979 aa10.25□□□□□ -0.77
COPS4-204ENST00000506443 SPZ1Q9BXG8 430 aa10.25□□□□□ -0.77
COPS4-204ENST00000506443 CELF4Q9BZC1 486 aaKnown RBP10.25□□□□□ -0.77
COPS4-204ENST00000506443 PCDHB12Q9Y5F1 795 aa10.25□□□□□ -0.77
COPS4-204ENST00000506443 PCDHA2Q9Y5H9 948 aa10.25□□□□□ -0.77
COPS4-204ENST00000506443 KDM3AQ9Y4C1 1321 aa10.25□□□□□ -0.77
COPS4-204ENST00000506443 WDR81Q562E7 1941 aa10.25□□□□□ -0.77
COPS4-204ENST00000506443 MYH9P35579 1960 aaKnown RBP10.25□□□□□ -0.77
COPS4-204ENST00000506443 C2orf71A6NGG8 1288 aa10.24□□□□□ -0.77
COPS4-204ENST00000506443 E7EWF7 191 aa10.24□□□□□ -0.77
COPS4-204ENST00000506443 MAFGO15525 162 aa10.24□□□□□ -0.77
COPS4-204ENST00000506443 N4BP1O75113 896 aaKnown RBP10.24□□□□□ -0.77
COPS4-204ENST00000506443 RPLP2P05387 115 aaKnown RBP10.24□□□□□ -0.77
COPS4-204ENST00000506443 STAG3L1P0CL83 205 aa10.24□□□□□ -0.77
COPS4-204ENST00000506443 MYBP10242 640 aa10.24□□□□□ -0.77
COPS4-204ENST00000506443 AOC1P19801 751 aa10.24□□□□□ -0.77
COPS4-204ENST00000506443 CA8P35219 290 aa10.24□□□□□ -0.77
COPS4-204ENST00000506443 PTH1RQ03431 593 aa10.24□□□□□ -0.77
COPS4-204ENST00000506443 UBE3AQ05086 875 aa10.24□□□□□ -0.77
COPS4-204ENST00000506443 WTAPQ15007 396 aa10.24□□□□□ -0.77
COPS4-204ENST00000506443 CLLU1OSQ5K130 101 aa10.24□□□□□ -0.77
COPS4-204ENST00000506443 MCTP2Q6DN12 878 aa10.24□□□□□ -0.77
COPS4-204ENST00000506443 TMC5Q6UXY8 1006 aa10.24□□□□□ -0.77
COPS4-204ENST00000506443 RAB11FIP4Q86YS3 637 aa10.24□□□□□ -0.77
COPS4-204ENST00000506443 UBALD2Q8IYN6 164 aa10.24□□□□□ -0.77
COPS4-204ENST00000506443 SIX5Q8N196 739 aa10.24□□□□□ -0.77
COPS4-204ENST00000506443 CMTR1Q8N1G2 835 aaKnown RBP10.24□□□□□ -0.77
COPS4-204ENST00000506443 TDRD5Q8NAT2 981 aaKnown RBP10.24□□□□□ -0.77
COPS4-204ENST00000506443 CYP2W1Q8TAV3 490 aa10.24□□□□□ -0.77
COPS4-204ENST00000506443 CDHR1Q96JP9 859 aa10.24□□□□□ -0.77
COPS4-204ENST00000506443 CASD1Q96PB1 797 aa10.24□□□□□ -0.77
COPS4-204ENST00000506443 CDCA3Q99618 268 aaPredicted RBP10.24□□□□□ -0.77
COPS4-204ENST00000506443 IRF2BPLQ9H1B7 796 aa10.24□□□□□ -0.77
COPS4-204ENST00000506443 DOCK6Q96HP0 2047 aa10.24□□□□□ -0.77
COPS4-204ENST00000506443 PATJQ8NI35 1801 aa10.23□□□□□ -0.77
COPS4-204ENST00000506443 SMIM35A0A1B0GVV1 85 aa10.23□□□□□ -0.77
COPS4-204ENST00000506443 KRBA1A5PL33 1030 aa10.23□□□□□ -0.77
COPS4-204ENST00000506443 ZBTB42B2RXF5 422 aa10.23□□□□□ -0.77
COPS4-204ENST00000506443 LRRN2O75325 713 aa10.23□□□□□ -0.77
COPS4-204ENST00000506443 PLEKHA8P1O95397 391 aa10.23□□□□□ -0.77
COPS4-204ENST00000506443 METAP2P50579 478 aaKnown RBP eCLIP10.23□□□□□ -0.77
COPS4-204ENST00000506443 FAM189BP81408 668 aa10.23□□□□□ -0.77
COPS4-204ENST00000506443 KRT76Q01546 638 aa10.23□□□□□ -0.77
COPS4-204ENST00000506443 TRDNQ13061 729 aa10.23□□□□□ -0.77
COPS4-204ENST00000506443 ITGB3BPQ13352 177 aaPredicted RBP10.23□□□□□ -0.77
COPS4-204ENST00000506443 MTMR1Q13613 665 aa10.23□□□□□ -0.77
COPS4-204ENST00000506443 KIZQ2M2Z5 673 aa10.23□□□□□ -0.77
COPS4-204ENST00000506443 KCNT2Q6UVM3 1135 aa10.23□□□□□ -0.77
COPS4-204ENST00000506443 FAM43BQ6ZT52 329 aaPredicted RBP10.23□□□□□ -0.77
COPS4-204ENST00000506443 PLPPR4Q7Z2D5 763 aa10.23□□□□□ -0.77
COPS4-204ENST00000506443 CATIPQ7Z7H3 387 aa10.23□□□□□ -0.77
COPS4-204ENST00000506443 NME8Q8N427 588 aa10.23□□□□□ -0.77
COPS4-204ENST00000506443 SRBD1Q8N5C6 995 aaKnown RBP10.23□□□□□ -0.77
COPS4-204ENST00000506443 DTWD2Q8NBA8 298 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms