RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 TRIM49BA6NDI0 452 aa13.26□□□□□ -0.29
POLR2J3-211ENST00000506060 LRRC10BA6NIK2 292 aa13.26□□□□□ -0.29
POLR2J3-211ENST00000506060 RSPH10B2B2RC85 870 aa13.26□□□□□ -0.29
POLR2J3-211ENST00000506060 N4BP3O15049 544 aa13.26□□□□□ -0.29
POLR2J3-211ENST00000506060 CETN3O15182 167 aa13.26□□□□□ -0.29
POLR2J3-211ENST00000506060 ARIH2O95376 493 aa13.26□□□□□ -0.29
POLR2J3-211ENST00000506060 TPM1P09493 284 aa13.26□□□□□ -0.29
POLR2J3-211ENST00000506060 RSPH10BP0C881 870 aa13.26□□□□□ -0.29
POLR2J3-211ENST00000506060 PRKCSHP14314 528 aaPredicted RBP13.26□□□□□ -0.29
POLR2J3-211ENST00000506060 YY1P25490 414 aa13.26□□□□□ -0.29
POLR2J3-211ENST00000506060 MTIF2P46199 727 aaKnown RBP13.26□□□□□ -0.29
POLR2J3-211ENST00000506060 POLGP54098 1239 aaPredicted RBP13.26□□□□□ -0.29
POLR2J3-211ENST00000506060 RTP1P59025 263 aa13.26□□□□□ -0.29
POLR2J3-211ENST00000506060 SNRPFP62306 86 aaKnown RBP13.26□□□□□ -0.29
POLR2J3-211ENST00000506060 DMP1Q13316 513 aaPredicted RBP13.26□□□□□ -0.29
POLR2J3-211ENST00000506060 ACVR2BQ13705 512 aa13.26□□□□□ -0.29
POLR2J3-211ENST00000506060 PPP2R5AQ15172 486 aa13.26□□□□□ -0.29
POLR2J3-211ENST00000506060 HSP90AA4PQ58FG1 418 aa13.26□□□□□ -0.29
POLR2J3-211ENST00000506060 PLA2G4FQ68DD2 849 aa13.26□□□□□ -0.29
POLR2J3-211ENST00000506060 TAPT1Q6NXT6 567 aa13.26□□□□□ -0.29
POLR2J3-211ENST00000506060 ZNF720Q7Z2F6 126 aa13.26□□□□□ -0.29
POLR2J3-211ENST00000506060 CREBRFQ8IUR6 639 aa13.26□□□□□ -0.29
POLR2J3-211ENST00000506060 NELFCDQ8IXH7 590 aa13.26□□□□□ -0.29
POLR2J3-211ENST00000506060 SCFD1Q8WVM8 642 aa13.26□□□□□ -0.29
POLR2J3-211ENST00000506060 SLC7A3Q8WY07 619 aa13.26□□□□□ -0.29
POLR2J3-211ENST00000506060 BBXQ8WY36 941 aaPredicted RBP13.26□□□□□ -0.29
POLR2J3-211ENST00000506060 SEMA6BQ9H3T3 888 aa13.26□□□□□ -0.29
POLR2J3-211ENST00000506060 TMEM206Q9H813 350 aa13.26□□□□□ -0.29
POLR2J3-211ENST00000506060 TYW1Q9NV66 732 aaKnown RBP13.26□□□□□ -0.29
POLR2J3-211ENST00000506060 ZHX1Q9UKY1 873 aaPredicted RBP13.26□□□□□ -0.29
POLR2J3-211ENST00000506060 EXOC7Q9UPT5 735 aa13.26□□□□□ -0.29
POLR2J3-211ENST00000506060 TRAF3IP3Q9Y228 551 aa13.26□□□□□ -0.29
POLR2J3-211ENST00000506060 SFI1A8K8P3 1242 aa13.25□□□□□ -0.29
POLR2J3-211ENST00000506060 K7ENM7 598 aa13.25□□□□□ -0.29
POLR2J3-211ENST00000506060 SNAI1O95863 264 aaPredicted RBP13.25□□□□□ -0.29
POLR2J3-211ENST00000506060 COPB1P53618 953 aaKnown RBP13.25□□□□□ -0.29
POLR2J3-211ENST00000506060 PMS1P54277 932 aaKnown RBP13.25□□□□□ -0.29
POLR2J3-211ENST00000506060 NPEPPSP55786 919 aa13.25□□□□□ -0.29
POLR2J3-211ENST00000506060 MAPK7Q13164 816 aa13.25□□□□□ -0.29
POLR2J3-211ENST00000506060 HSP90AA2PQ14568 343 aaPredicted RBP13.25□□□□□ -0.29
POLR2J3-211ENST00000506060 KRT31Q15323 416 aa13.25□□□□□ -0.29
POLR2J3-211ENST00000506060 MTERF2Q49AM1 385 aa13.25□□□□□ -0.29
POLR2J3-211ENST00000506060 DUSP28Q4G0W2 176 aa13.25□□□□□ -0.29
POLR2J3-211ENST00000506060 BRDTQ58F21 947 aaPredicted RBP13.25□□□□□ -0.29
POLR2J3-211ENST00000506060 TRMT1LQ7Z2T5 733 aaKnown RBP13.25□□□□□ -0.29
POLR2J3-211ENST00000506060 TMC6Q7Z403 805 aa13.25□□□□□ -0.29
POLR2J3-211ENST00000506060 FILIP1Q7Z7B0 1213 aa13.25□□□□□ -0.29
POLR2J3-211ENST00000506060 VSTM4Q8IW00 320 aa13.25□□□□□ -0.29
POLR2J3-211ENST00000506060 SYCP3Q8IZU3 236 aa13.25□□□□□ -0.29
POLR2J3-211ENST00000506060 CCDC150Q8NCX0 1101 aa13.25□□□□□ -0.29
POLR2J3-211ENST00000506060 PPTC7Q8NI37 304 aa13.25□□□□□ -0.29
POLR2J3-211ENST00000506060 NPLOC4Q8TAT6 608 aa13.25□□□□□ -0.29
POLR2J3-211ENST00000506060 SPIRE2Q8WWL2 714 aa13.25□□□□□ -0.29
POLR2J3-211ENST00000506060 CNOT6LQ96LI5 555 aaKnown RBP13.25□□□□□ -0.29
POLR2J3-211ENST00000506060 ACCSQ96QU6 501 aa13.25□□□□□ -0.29
POLR2J3-211ENST00000506060 ST6GALNAC4Q9H4F1 302 aa13.25□□□□□ -0.29
POLR2J3-211ENST00000506060 BCAS3Q9H6U6 928 aa13.25□□□□□ -0.29
POLR2J3-211ENST00000506060 NRBP1Q9UHY1 535 aa13.25□□□□□ -0.29
POLR2J3-211ENST00000506060 ZNF215Q9UL58 517 aaPredicted RBP13.25□□□□□ -0.29
POLR2J3-211ENST00000506060 ARID2Q68CP9 1835 aa13.25□□□□□ -0.29
POLR2J3-211ENST00000506060 PES1O00541 588 aaKnown RBP13.24□□□□□ -0.29
POLR2J3-211ENST00000506060 HBP1O60381 514 aa13.24□□□□□ -0.29
POLR2J3-211ENST00000506060 PPFIA4O75335 1185 aa13.24□□□□□ -0.29
POLR2J3-211ENST00000506060 PRPF6O94906 941 aaKnown RBP13.24□□□□□ -0.29
POLR2J3-211ENST00000506060 STBD1O95210 358 aa13.24□□□□□ -0.29
POLR2J3-211ENST00000506060 MYBP10242 640 aa13.24□□□□□ -0.29
POLR2J3-211ENST00000506060 PPP2R3AQ06190 1150 aa13.24□□□□□ -0.29
POLR2J3-211ENST00000506060 ARHGAP1Q07960 439 aa13.24□□□□□ -0.29
POLR2J3-211ENST00000506060 TRIM14Q14142 442 aa13.24□□□□□ -0.29
POLR2J3-211ENST00000506060 NR1I3Q14994 352 aa13.24□□□□□ -0.29
POLR2J3-211ENST00000506060 EMC2Q15006 297 aa13.24□□□□□ -0.29
POLR2J3-211ENST00000506060 NFIL3Q16649 462 aa13.24□□□□□ -0.29
POLR2J3-211ENST00000506060 CCDC40Q4G0X9 1142 aa13.24□□□□□ -0.29
POLR2J3-211ENST00000506060 ZCWPW2Q504Y3 356 aa13.24□□□□□ -0.29
POLR2J3-211ENST00000506060 FKBP15Q5T1M5 1219 aa13.24□□□□□ -0.29
POLR2J3-211ENST00000506060 SPECC1LQ69YQ0 1117 aa13.24□□□□□ -0.29
POLR2J3-211ENST00000506060 MAEAQ7L5Y9 396 aa13.24□□□□□ -0.29
POLR2J3-211ENST00000506060 ATP8B4Q8TF62 1192 aa13.24□□□□□ -0.29
POLR2J3-211ENST00000506060 TCP11Q8WWU5 503 aa13.24□□□□□ -0.29
POLR2J3-211ENST00000506060 USP6NLQ92738 828 aa13.24□□□□□ -0.29
POLR2J3-211ENST00000506060 TUBGCP2Q9BSJ2 902 aa13.24□□□□□ -0.29
POLR2J3-211ENST00000506060 GBP3Q9H0R5 595 aa13.24□□□□□ -0.29
POLR2J3-211ENST00000506060 KCTD10Q9H3F6 313 aa13.24□□□□□ -0.29
POLR2J3-211ENST00000506060 RTN4Q9NQC3 1192 aaKnown RBP13.24□□□□□ -0.29
POLR2J3-211ENST00000506060 PDGFCQ9NRA1 345 aa13.24□□□□□ -0.29
POLR2J3-211ENST00000506060 ERAP1Q9NZ08 941 aa13.24□□□□□ -0.29
POLR2J3-211ENST00000506060 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.24□□□□□ -0.29
POLR2J3-211ENST00000506060 DOCK3Q8IZD9 2030 aa13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 PHLPP2Q6ZVD8 1323 aa13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 XRCC5P13010 732 aaKnown RBP13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 MSNP26038 577 aaKnown RBP13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 HOXD10P28358 340 aa13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 NMT1P30419 496 aaKnown RBP13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 MAP2K2P36507 400 aa13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 ADCYAP1R1P41586 468 aa13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 DNM2P50570 870 aa13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 NCKAP1LP55160 1127 aa13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 PEX3P56589 373 aa13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 TNFAIP2Q03169 654 aa13.23□□□□□ -0.29
POLR2J3-211ENST00000506060 TBC1D8BQ0IIM8 1120 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms