RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 MED10Q9BTT4 135 aa15.27■□□□□ 0.03
TCOF1-207ENST00000504761 KCNK9Q9NPC2 374 aa15.27■□□□□ 0.03
TCOF1-207ENST00000504761 ROBO1Q9Y6N7 1651 aa15.27■□□□□ 0.03
TCOF1-207ENST00000504761 MYL3P08590 195 aa15.27■□□□□ 0.03
TCOF1-207ENST00000504761 ACTN1P12814 892 aa15.27■□□□□ 0.03
TCOF1-207ENST00000504761 RNF149Q8NC42 400 aa15.27■□□□□ 0.03
TCOF1-207ENST00000504761 PSMD1Q99460 953 aa15.27■□□□□ 0.03
TCOF1-207ENST00000504761 EMSYQ7Z589 1322 aa15.27■□□□□ 0.03
TCOF1-207ENST00000504761 BPIFB4P59827 614 aa15.26■□□□□ 0.03
TCOF1-207ENST00000504761 GUCY2DQ02846 1103 aa15.26■□□□□ 0.03
TCOF1-207ENST00000504761 KIFC3Q9BVG8 833 aa15.26■□□□□ 0.03
TCOF1-207ENST00000504761 RPF1Q9H9Y2 349 aaKnown RBP15.26■□□□□ 0.03
TCOF1-207ENST00000504761 CEP72Q9P209 647 aa15.26■□□□□ 0.03
TCOF1-207ENST00000504761 LIMA1Q9UHB6 759 aaKnown RBP15.26■□□□□ 0.03
TCOF1-207ENST00000504761 RGPD2P0DJD1 1756 aa15.26■□□□□ 0.03
TCOF1-207ENST00000504761 SEC31AO94979 1220 aaKnown RBP15.26■□□□□ 0.03
TCOF1-207ENST00000504761 IRX5P78411 483 aaPredicted RBP15.26■□□□□ 0.03
TCOF1-207ENST00000504761 PAK2Q13177 524 aa15.26■□□□□ 0.03
TCOF1-207ENST00000504761 NR1I3Q14994 352 aa15.26■□□□□ 0.03
TCOF1-207ENST00000504761 ZNF568Q3ZCX4 644 aa15.26■□□□□ 0.03
TCOF1-207ENST00000504761 ANKS1AQ92625 1134 aa15.26■□□□□ 0.03
TCOF1-207ENST00000504761 RPS6KC1Q96S38 1066 aa15.26■□□□□ 0.03
TCOF1-207ENST00000504761 TLR3O15455 904 aaKnown RBP15.26■□□□□ 0.03
TCOF1-207ENST00000504761 VIL1P09327 827 aaKnown RBP15.26■□□□□ 0.03
TCOF1-207ENST00000504761 CYP11B2P19099 503 aa15.26■□□□□ 0.03
TCOF1-207ENST00000504761 DRAP1Q14919 205 aaPredicted RBP15.26■□□□□ 0.03
TCOF1-207ENST00000504761 CCDC125Q86Z20 511 aa15.26■□□□□ 0.03
TCOF1-207ENST00000504761 GMCL1P1Q8NEA9 526 aa15.26■□□□□ 0.03
TCOF1-207ENST00000504761 CCL15-CCL14A0A0B4J2E2 113 aa15.25■□□□□ 0.03
TCOF1-207ENST00000504761 GOLGA6BA6NDN3 693 aa15.25■□□□□ 0.03
TCOF1-207ENST00000504761 PGK2P07205 417 aa15.25■□□□□ 0.03
TCOF1-207ENST00000504761 CCL15Q16663 113 aa15.25■□□□□ 0.03
TCOF1-207ENST00000504761 MAP1SQ66K74 1059 aaPredicted RBP15.25■□□□□ 0.03
TCOF1-207ENST00000504761 PASD1Q8IV76 773 aa15.25■□□□□ 0.03
TCOF1-207ENST00000504761 PPP1R9AQ9ULJ8 1098 aa15.25■□□□□ 0.03
TCOF1-207ENST00000504761 TTLL3Q9Y4R7 772 aa15.25■□□□□ 0.03
TCOF1-207ENST00000504761 TACC3Q9Y6A5 838 aa15.25■□□□□ 0.03
TCOF1-207ENST00000504761 CACNA1FO60840 1977 aa15.25■□□□□ 0.03
TCOF1-207ENST00000504761 ADM5C9JUS6 153 aa15.25■□□□□ 0.03
TCOF1-207ENST00000504761 SF3A3Q12874 501 aaKnown RBP eCLIP15.25■□□□□ 0.03
TCOF1-207ENST00000504761 SNAPC2Q13487 334 aa15.25■□□□□ 0.03
TCOF1-207ENST00000504761 SLFN12LQ6IEE8 588 aa15.25■□□□□ 0.03
TCOF1-207ENST00000504761 RPGRIP1Q96KN7 1286 aa15.25■□□□□ 0.03
TCOF1-207ENST00000504761 RUSC1Q9BVN2 902 aa15.25■□□□□ 0.03
TCOF1-207ENST00000504761 UNC45AQ9H3U1 944 aa15.25■□□□□ 0.03
TCOF1-207ENST00000504761 GPRC5CQ9NQ84 441 aa15.25■□□□□ 0.03
TCOF1-207ENST00000504761 PHLPP1O60346 1717 aa15.25■□□□□ 0.03
TCOF1-207ENST00000504761 PDXKO00764 312 aa15.25■□□□□ 0.03
TCOF1-207ENST00000504761 MAPK4P31152 587 aa15.25■□□□□ 0.03
TCOF1-207ENST00000504761 SREBF1P36956 1147 aa15.25■□□□□ 0.03
TCOF1-207ENST00000504761 ACOT2P49753 483 aa15.25■□□□□ 0.03
TCOF1-207ENST00000504761 HUNKP57058 714 aa15.25■□□□□ 0.03
TCOF1-207ENST00000504761 PSMC6P62333 389 aa15.25■□□□□ 0.03
TCOF1-207ENST00000504761 CCZ1BP86790 482 aa15.25■□□□□ 0.03
TCOF1-207ENST00000504761 CCZ1P86791 482 aaPredicted RBP15.25■□□□□ 0.03
TCOF1-207ENST00000504761 C2orf54Q08AI8 447 aa15.25■□□□□ 0.03
TCOF1-207ENST00000504761 TAF1CQ15572 869 aaPredicted RBP15.25■□□□□ 0.03
TCOF1-207ENST00000504761 E4F1Q66K89 784 aaPredicted RBP15.25■□□□□ 0.03
TCOF1-207ENST00000504761 FAM149B1Q96BN6 582 aa15.25■□□□□ 0.03
TCOF1-207ENST00000504761 FAM167AQ96KS9 214 aa15.25■□□□□ 0.03
TCOF1-207ENST00000504761 FHDC1Q9C0D6 1143 aaPredicted RBP15.25■□□□□ 0.03
TCOF1-207ENST00000504761 PHLPP2Q6ZVD8 1323 aa15.25■□□□□ 0.03
TCOF1-207ENST00000504761 RIT2Q99578 217 aa15.25■□□□□ 0.03
TCOF1-207ENST00000504761 ADARB2Q9NS39 739 aaKnown RBP15.25■□□□□ 0.03
TCOF1-207ENST00000504761 RSPH14Q9UHP6 348 aa15.25■□□□□ 0.03
TCOF1-207ENST00000504761 WNT7AO00755 349 aa15.24■□□□□ 0.03
TCOF1-207ENST00000504761 DGKZQ13574 1117 aa15.24■□□□□ 0.03
TCOF1-207ENST00000504761 TKFCQ3LXA3 575 aa15.24■□□□□ 0.03
TCOF1-207ENST00000504761 SPOUT1Q5T280 376 aaKnown RBP15.24■□□□□ 0.03
TCOF1-207ENST00000504761 IL17RAQ96F46 866 aa15.24■□□□□ 0.03
TCOF1-207ENST00000504761 IQCGQ9H095 443 aaKnown RBP15.24■□□□□ 0.03
TCOF1-207ENST00000504761 PTPN22Q9Y2R2 807 aa15.24■□□□□ 0.03
TCOF1-207ENST00000504761 E7EVH7 732 aa15.24■□□□□ 0.03
TCOF1-207ENST00000504761 STAM2O75886 525 aa15.24■□□□□ 0.03
TCOF1-207ENST00000504761 CELF2O95319 508 aaKnown RBP15.24■□□□□ 0.03
TCOF1-207ENST00000504761 SSTR3P32745 418 aaPredicted RBP15.24■□□□□ 0.03
TCOF1-207ENST00000504761 ZNF157P51786 506 aaPredicted RBP15.24■□□□□ 0.03
TCOF1-207ENST00000504761 PRKCEQ02156 737 aa15.24■□□□□ 0.03
TCOF1-207ENST00000504761 KBTBD4Q9NVX7 518 aa15.24■□□□□ 0.03
TCOF1-207ENST00000504761 JRKLQ9Y4A0 524 aa15.24■□□□□ 0.03
TCOF1-207ENST00000504761 KCPQ6ZWJ8 1503 aa15.24■□□□□ 0.03
TCOF1-207ENST00000504761 FAM86B1E9PN63 330 aa15.24■□□□□ 0.03
TCOF1-207ENST00000504761 ABL1P00519 1130 aa15.24■□□□□ 0.03
TCOF1-207ENST00000504761 FAM86B2P0C5J1 330 aa15.24■□□□□ 0.03
TCOF1-207ENST00000504761 POLR2BP30876 1174 aaKnown RBP15.24■□□□□ 0.03
TCOF1-207ENST00000504761 XKR3Q5GH77 459 aa15.24■□□□□ 0.03
TCOF1-207ENST00000504761 RBM43Q6ZSC3 357 aaKnown RBP15.24■□□□□ 0.03
TCOF1-207ENST00000504761 OTUD6BQ8N6M0 293 aa15.24■□□□□ 0.03
TCOF1-207ENST00000504761 FAM76AQ8TAV0 307 aa15.24■□□□□ 0.03
TCOF1-207ENST00000504761 TCP11Q8WWU5 503 aa15.24■□□□□ 0.03
TCOF1-207ENST00000504761 FAM204AQ9H8W3 233 aa15.24■□□□□ 0.03
TCOF1-207ENST00000504761 HDAC6Q9UBN7 1215 aa15.24■□□□□ 0.03
TCOF1-207ENST00000504761 CAPN9O14815 690 aa15.23■□□□□ 0.03
TCOF1-207ENST00000504761 EPHX2P34913 555 aa15.23■□□□□ 0.03
TCOF1-207ENST00000504761 TMEM270Q6UE05 265 aa15.23■□□□□ 0.03
TCOF1-207ENST00000504761 PPP1R21Q6ZMI0 780 aa15.23■□□□□ 0.03
TCOF1-207ENST00000504761 GLYCTKQ8IVS8 523 aa15.23■□□□□ 0.03
TCOF1-207ENST00000504761 TC2NQ8N9U0 490 aa15.23■□□□□ 0.03
TCOF1-207ENST00000504761 EPC1Q9H2F5 836 aa15.23■□□□□ 0.03
TCOF1-207ENST00000504761 GRIN3BO60391 1043 aa15.23■□□□□ 0.03
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