RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 C17orf80Q9BSJ5 609 aa16.01■□□□□ 0.15
HOXC9-202ENST00000504557 BMP2KQ9NSY1 1161 aaPredicted RBP16.01■□□□□ 0.15
HOXC9-202ENST00000504557 NOC2LQ9Y3T9 749 aaKnown RBP16.01■□□□□ 0.15
HOXC9-202ENST00000504557 GTPBP6O43824 516 aaPredicted RBP16■□□□□ 0.15
HOXC9-202ENST00000504557 NEMFO60524 1076 aa16■□□□□ 0.15
HOXC9-202ENST00000504557 MCM7P33993 719 aa16■□□□□ 0.15
HOXC9-202ENST00000504557 TXKP42681 527 aa16■□□□□ 0.15
HOXC9-202ENST00000504557 PSMC5P62195 406 aa16■□□□□ 0.15
HOXC9-202ENST00000504557 HMGN5P82970 282 aaKnown RBP16■□□□□ 0.15
HOXC9-202ENST00000504557 GRB10Q13322 594 aa16■□□□□ 0.15
HOXC9-202ENST00000504557 PPP2R5CQ13362 524 aa16■□□□□ 0.15
HOXC9-202ENST00000504557 CTTNQ14247 550 aaKnown RBP16■□□□□ 0.15
HOXC9-202ENST00000504557 XKR3Q5GH77 459 aa16■□□□□ 0.15
HOXC9-202ENST00000504557 B3GNT9Q6UX72 402 aa16■□□□□ 0.15
HOXC9-202ENST00000504557 SLFN12Q8IYM2 578 aa16■□□□□ 0.15
HOXC9-202ENST00000504557 LINC01599Q8WXQ3 324 aa16■□□□□ 0.15
HOXC9-202ENST00000504557 DYDC2Q96IM9 177 aa16■□□□□ 0.15
HOXC9-202ENST00000504557 RGL1Q9NZL6 768 aa16■□□□□ 0.15
HOXC9-202ENST00000504557 PRUNE2Q8WUY3 3088 aa16■□□□□ 0.15
HOXC9-202ENST00000504557 DENND3A2RUS2 1198 aa15.99■□□□□ 0.15
HOXC9-202ENST00000504557 TBX3O15119 743 aa15.99■□□□□ 0.15
HOXC9-202ENST00000504557 CSPG5O95196 566 aa15.99■□□□□ 0.15
HOXC9-202ENST00000504557 CD2BP2O95400 341 aaKnown RBP15.99■□□□□ 0.15
HOXC9-202ENST00000504557 QARSP47897 775 aaKnown RBP15.99■□□□□ 0.15
HOXC9-202ENST00000504557 HTRA4P83105 476 aaPredicted RBP15.99■□□□□ 0.15
HOXC9-202ENST00000504557 DRP2Q13474 957 aa15.99■□□□□ 0.15
HOXC9-202ENST00000504557 PAN2Q504Q3 1202 aaKnown RBP15.99■□□□□ 0.15
HOXC9-202ENST00000504557 RTN4RL1Q86UN2 441 aaPredicted RBP15.99■□□□□ 0.15
HOXC9-202ENST00000504557 FBXO22Q8NEZ5 403 aa15.99■□□□□ 0.15
HOXC9-202ENST00000504557 NLRP7Q8WX94 980 aa15.99■□□□□ 0.15
HOXC9-202ENST00000504557 LXNQ9BS40 222 aa15.99■□□□□ 0.15
HOXC9-202ENST00000504557 TMX1Q9H3N1 280 aa15.99■□□□□ 0.15
HOXC9-202ENST00000504557 LRFN2Q9ULH4 789 aa15.99■□□□□ 0.15
HOXC9-202ENST00000504557 ST3GAL5Q9UNP4 418 aa15.99■□□□□ 0.15
HOXC9-202ENST00000504557 FNDC1Q4ZHG4 1894 aaPredicted RBP15.99■□□□□ 0.15
HOXC9-202ENST00000504557 KDM3AQ9Y4C1 1321 aa15.98■□□□□ 0.15
HOXC9-202ENST00000504557 MGEA5O60502 916 aa15.98■□□□□ 0.15
HOXC9-202ENST00000504557 GPR32O75388 356 aa15.98■□□□□ 0.15
HOXC9-202ENST00000504557 CSDE1O75534 798 aaKnown RBP15.98■□□□□ 0.15
HOXC9-202ENST00000504557 STBD1O95210 358 aa15.98■□□□□ 0.15
HOXC9-202ENST00000504557 FGFR4P22455 802 aa15.98■□□□□ 0.15
HOXC9-202ENST00000504557 CRYBB1P53674 252 aaPredicted RBP15.98■□□□□ 0.15
HOXC9-202ENST00000504557 NPEPPSP55786 919 aa15.98■□□□□ 0.15
HOXC9-202ENST00000504557 ZNF174Q15697 407 aa15.98■□□□□ 0.15
HOXC9-202ENST00000504557 ANO5Q75V66 913 aa15.98■□□□□ 0.15
HOXC9-202ENST00000504557 TPH2Q8IWU9 490 aa15.98■□□□□ 0.15
HOXC9-202ENST00000504557 ADAM2Q99965 735 aa15.98■□□□□ 0.15
HOXC9-202ENST00000504557 FTHL17Q9BXU8 183 aa15.98■□□□□ 0.15
HOXC9-202ENST00000504557 TTC12Q9H892 705 aaPredicted RBP15.98■□□□□ 0.15
HOXC9-202ENST00000504557 ERVK-5Q9HDB9 667 aa15.98■□□□□ 0.15
HOXC9-202ENST00000504557 WRAP73Q9P2S5 460 aaPredicted RBP15.98■□□□□ 0.15
HOXC9-202ENST00000504557 PCDHA12Q9UN75 941 aa15.98■□□□□ 0.15
HOXC9-202ENST00000504557 TCF20Q9UGU0 1960 aaKnown RBP15.98■□□□□ 0.15
HOXC9-202ENST00000504557 MYO7AQ13402 2215 aa15.97■□□□□ 0.15
HOXC9-202ENST00000504557 GPR182O15218 404 aa15.97■□□□□ 0.15
HOXC9-202ENST00000504557 P4HBP07237 508 aaKnown RBP15.97■□□□□ 0.15
HOXC9-202ENST00000504557 GATMP50440 423 aa15.97■□□□□ 0.15
HOXC9-202ENST00000504557 ERVK-21P61565 698 aa15.97■□□□□ 0.15
HOXC9-202ENST00000504557 BTG3Q14201 252 aaPredicted RBP15.97■□□□□ 0.15
HOXC9-202ENST00000504557 EPHA7Q15375 998 aa15.97■□□□□ 0.15
HOXC9-202ENST00000504557 TARBP2Q15633 366 aaKnown RBP15.97■□□□□ 0.15
HOXC9-202ENST00000504557 FAM228AQ86W67 206 aa15.97■□□□□ 0.15
HOXC9-202ENST00000504557 FIBCD1Q8N539 461 aa15.97■□□□□ 0.15
HOXC9-202ENST00000504557 ZNF579Q8NAF0 562 aaKnown RBP15.97■□□□□ 0.15
HOXC9-202ENST00000504557 FBXO18Q8NFZ0 1043 aa15.97■□□□□ 0.15
HOXC9-202ENST00000504557 TMX3Q96JJ7 454 aa15.97■□□□□ 0.15
HOXC9-202ENST00000504557 CEP170P1Q96L14 293 aa15.97■□□□□ 0.15
HOXC9-202ENST00000504557 TBC1D32Q96NH3 1257 aa15.97■□□□□ 0.15
HOXC9-202ENST00000504557 NIFKQ9BYG3 293 aaKnown RBP15.97■□□□□ 0.15
HOXC9-202ENST00000504557 TMEM60Q9H2L4 133 aa15.97■□□□□ 0.15
HOXC9-202ENST00000504557 MTCH2Q9Y6C9 303 aa15.97■□□□□ 0.15
HOXC9-202ENST00000504557 SQORQ9Y6N5 450 aa15.97■□□□□ 0.15
HOXC9-202ENST00000504557 ATG2AQ2TAZ0 1938 aa15.97■□□□□ 0.15
HOXC9-202ENST00000504557 ADGRA3Q8IWK6 1321 aa15.96■□□□□ 0.15
HOXC9-202ENST00000504557 A0A087WWV3 80 aa15.96■□□□□ 0.15
HOXC9-202ENST00000504557 POTEMA6NI47 508 aa15.96■□□□□ 0.15
HOXC9-202ENST00000504557 ZBTB39O15060 712 aa15.96■□□□□ 0.15
HOXC9-202ENST00000504557 CTNNB1P35222 781 aa15.96■□□□□ 0.15
HOXC9-202ENST00000504557 DNM2P50570 870 aa15.96■□□□□ 0.15
HOXC9-202ENST00000504557 NBR1Q14596 966 aa15.96■□□□□ 0.15
HOXC9-202ENST00000504557 XKR9Q5GH70 373 aa15.96■□□□□ 0.15
HOXC9-202ENST00000504557 MCTP1Q6DN14 999 aa15.96■□□□□ 0.15
HOXC9-202ENST00000504557 RHPN2Q8IUC4 686 aa15.96■□□□□ 0.15
HOXC9-202ENST00000504557 LINC01465Q8N7H1 131 aa15.96■□□□□ 0.15
HOXC9-202ENST00000504557 SP7Q8TDD2 431 aaPredicted RBP15.96■□□□□ 0.15
HOXC9-202ENST00000504557 NLRP4Q96MN2 994 aa15.96■□□□□ 0.15
HOXC9-202ENST00000504557 EIF2AK1Q9BQI3 630 aaKnown RBP15.96■□□□□ 0.15
HOXC9-202ENST00000504557 TSPYL2Q9H2G4 693 aaPredicted RBP15.96■□□□□ 0.15
HOXC9-202ENST00000504557 CYP26B1Q9NR63 512 aa15.96■□□□□ 0.15
HOXC9-202ENST00000504557 SUCLA2Q9P2R7 463 aaPredicted RBP15.96■□□□□ 0.15
HOXC9-202ENST00000504557 LPXNO60711 386 aa15.95■□□□□ 0.14
HOXC9-202ENST00000504557 DKC1O60832 514 aaKnown RBP eCLIP15.95■□□□□ 0.14
HOXC9-202ENST00000504557 STAG3L1P0CL83 205 aa15.95■□□□□ 0.14
HOXC9-202ENST00000504557 YWHABP31946 246 aaKnown RBP15.95■□□□□ 0.14
HOXC9-202ENST00000504557 GPC3P51654 580 aa15.95■□□□□ 0.14
HOXC9-202ENST00000504557 POLGP54098 1239 aaPredicted RBP15.95■□□□□ 0.14
HOXC9-202ENST00000504557 SPIRE1Q08AE8 756 aa15.95■□□□□ 0.14
HOXC9-202ENST00000504557 EPC2Q52LR7 807 aa15.95■□□□□ 0.14
HOXC9-202ENST00000504557 TTC38Q5R3I4 469 aa15.95■□□□□ 0.14
HOXC9-202ENST00000504557 ODR4Q5SWX8 454 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms