RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 TJP2Q9UDY2 1190 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 A0A0G2JS52 829 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 DGKIO75912 1065 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 CKMP06732 381 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 CD33P20138 364 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 CEBPAP49715 358 aaPredicted RBP5.91□□□□□ -1.46
NIPBL-204ENST00000504430 GSTM4Q03013 218 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 MAJINQ3KP22 176 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 TTLL5Q6EMB2 1281 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 SLC30A6Q6NXT4 461 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 TATDN1Q6P1N9 297 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 CACNA2D3Q8IZS8 1091 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 ZSCAN31Q96LW9 406 aaPredicted RBP5.91□□□□□ -1.46
NIPBL-204ENST00000504430 ZFYVE1Q9HBF4 777 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 WASF2Q9Y6W5 498 aa5.91□□□□□ -1.46
NIPBL-204ENST00000504430 B4DLN1 442 aa5.9□□□□□ -1.46
NIPBL-204ENST00000504430 DLL1O00548 723 aa5.9□□□□□ -1.46
NIPBL-204ENST00000504430 KIF20AO95235 890 aa5.9□□□□□ -1.46
NIPBL-204ENST00000504430 CSTBP04080 98 aaKnown RBP5.9□□□□□ -1.46
NIPBL-204ENST00000504430 PHKA1P46020 1223 aa5.9□□□□□ -1.46
NIPBL-204ENST00000504430 TRPC1P48995 793 aa5.9□□□□□ -1.46
NIPBL-204ENST00000504430 SPEM2Q0P670 501 aa5.9□□□□□ -1.46
NIPBL-204ENST00000504430 KIAA2012Q0VF49 1180 aa5.9□□□□□ -1.46
NIPBL-204ENST00000504430 SETMARQ53H47 684 aaPredicted RBP5.9□□□□□ -1.46
NIPBL-204ENST00000504430 RPS26P11Q5JNZ5 115 aaPredicted RBP5.9□□□□□ -1.46
NIPBL-204ENST00000504430 VWA5B2Q8N398 1253 aa5.9□□□□□ -1.46
NIPBL-204ENST00000504430 C2orf69Q8N8R5 385 aa5.9□□□□□ -1.46
NIPBL-204ENST00000504430 YME1L1Q96TA2 773 aa5.9□□□□□ -1.46
NIPBL-204ENST00000504430 TMEM120AQ9BXJ8 343 aa5.9□□□□□ -1.46
NIPBL-204ENST00000504430 EMC9Q9Y3B6 208 aa5.9□□□□□ -1.46
NIPBL-204ENST00000504430 FAM227AF5H4B4 570 aa5.9□□□□□ -1.46
NIPBL-204ENST00000504430 SOX1O00570 391 aaPredicted RBP5.9□□□□□ -1.46
NIPBL-204ENST00000504430 ACKR2O00590 384 aa5.9□□□□□ -1.46
NIPBL-204ENST00000504430 ZNF862O60290 1169 aa5.9□□□□□ -1.46
NIPBL-204ENST00000504430 CLEC3AO75596 197 aa5.9□□□□□ -1.46
NIPBL-204ENST00000504430 IL1RL1Q01638 556 aa5.9□□□□□ -1.46
NIPBL-204ENST00000504430 TTC39AQ5SRH9 613 aa5.9□□□□□ -1.46
NIPBL-204ENST00000504430 FAM117BQ6P1L5 589 aa5.9□□□□□ -1.46
NIPBL-204ENST00000504430 LRRTM4Q86VH4 590 aa5.9□□□□□ -1.46
NIPBL-204ENST00000504430 CCDC103Q8IW40 242 aa5.9□□□□□ -1.46
NIPBL-204ENST00000504430 PCDH19Q8TAB3 1148 aa5.9□□□□□ -1.46
NIPBL-204ENST00000504430 UTP15Q8TED0 518 aaKnown RBP5.9□□□□□ -1.46
NIPBL-204ENST00000504430 RAB24Q969Q5 203 aa5.9□□□□□ -1.46
NIPBL-204ENST00000504430 SEMA4AQ9H3S1 761 aa5.9□□□□□ -1.46
NIPBL-204ENST00000504430 RABEP2Q9H5N1 569 aa5.9□□□□□ -1.46
NIPBL-204ENST00000504430 CABP5Q9NP86 173 aa5.9□□□□□ -1.46
NIPBL-204ENST00000504430 ADD3Q9UEY8 706 aaKnown RBP5.9□□□□□ -1.46
NIPBL-204ENST00000504430 USP19O94966 1318 aa5.9□□□□□ -1.46
NIPBL-204ENST00000504430 VGLL3A8MV65 326 aa5.9□□□□□ -1.47
NIPBL-204ENST00000504430 TUSC2O75896 110 aa5.9□□□□□ -1.47
NIPBL-204ENST00000504430 GOSR1O95249 250 aa5.9□□□□□ -1.47
NIPBL-204ENST00000504430 CIAPIN1Q6FI81 312 aa5.9□□□□□ -1.47
NIPBL-204ENST00000504430 ISM2Q6H9L7 571 aa5.9□□□□□ -1.47
NIPBL-204ENST00000504430 DARS2Q6PI48 645 aaKnown RBP5.9□□□□□ -1.47
NIPBL-204ENST00000504430 NUP54Q7Z3B4 507 aa5.9□□□□□ -1.47
NIPBL-204ENST00000504430 RTN4RL1Q86UN2 441 aaPredicted RBP5.9□□□□□ -1.47
NIPBL-204ENST00000504430 ERC1Q8IUD2 1116 aa5.9□□□□□ -1.47
NIPBL-204ENST00000504430 IQCF2Q8IXL9 164 aa5.9□□□□□ -1.47
NIPBL-204ENST00000504430 CHST14Q8NCH0 376 aa5.9□□□□□ -1.47
NIPBL-204ENST00000504430 PLBD2Q8NHP8 589 aa5.9□□□□□ -1.47
NIPBL-204ENST00000504430 GABPB2Q8TAK5 448 aaPredicted RBP5.9□□□□□ -1.47
NIPBL-204ENST00000504430 MXD3Q9BW11 206 aa5.9□□□□□ -1.47
NIPBL-204ENST00000504430 L1RE1Q9UN81 338 aa5.9□□□□□ -1.47
NIPBL-204ENST00000504430 A0A0B4J203 849 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 KDM1AO60341 852 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 NDUFS2O75306 463 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 CPB1P15086 417 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 PDCP20941 246 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 ICA1Q05084 483 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 PSMD6Q15008 389 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 GDF6Q6KF10 455 aaPredicted RBP5.89□□□□□ -1.47
NIPBL-204ENST00000504430 FIP1L1Q6UN15 594 aaKnown RBP5.89□□□□□ -1.47
NIPBL-204ENST00000504430 DENND1CQ8IV53 801 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 VPS52Q8N1B4 723 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 ALPK1Q96QP1 1244 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 ADPGKQ9BRR6 497 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 IRAK4Q9NWZ3 460 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 RSF1Q96T23 1441 aaPredicted RBP5.89□□□□□ -1.47
NIPBL-204ENST00000504430 AQP12BA6NM10 295 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 DDX58O95786 925 aaKnown RBP5.89□□□□□ -1.47
NIPBL-204ENST00000504430 KRT1P04264 644 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 HTR1BP28222 390 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 GBP1P32455 592 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 HOXD13P35453 343 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 SCRN1Q12765 414 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 FOXC1Q12948 553 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 PRKG1Q13976 671 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 PDE3AQ14432 1141 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 PGS1Q32NB8 556 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 ALKBH5Q6P6C2 394 aaKnown RBP5.89□□□□□ -1.47
NIPBL-204ENST00000504430 HDXQ7Z353 690 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 SRGAP1Q7Z6B7 1085 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 CELF5Q8N6W0 485 aaKnown RBP5.89□□□□□ -1.47
NIPBL-204ENST00000504430 BAG1Q99933 345 aaPredicted RBP5.89□□□□□ -1.47
NIPBL-204ENST00000504430 C7orf25Q9BPX7 421 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 MCMBPQ9BTE3 642 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 TXLNGYQ9BZA5 131 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 SOX13Q9UN79 622 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 SPDYE3A6NKU9 549 aa5.89□□□□□ -1.47
NIPBL-204ENST00000504430 SPTLC2O15270 562 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms