RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 C17orf102A2RUQ5 167 aa15.37■□□□□ 0.05
CYSTM1-202ENST00000504227 ZBTB42B2RXF5 422 aa15.37■□□□□ 0.05
CYSTM1-202ENST00000504227 TBCAO75347 108 aaKnown RBP15.37■□□□□ 0.05
CYSTM1-202ENST00000504227 MAFO75444 373 aaPredicted RBP15.37■□□□□ 0.05
CYSTM1-202ENST00000504227 PRR29P0C7W0 189 aa15.37■□□□□ 0.05
CYSTM1-202ENST00000504227 KLRC1P26715 233 aa15.37■□□□□ 0.05
CYSTM1-202ENST00000504227 CASP1P29466 404 aa15.37■□□□□ 0.05
CYSTM1-202ENST00000504227 GJA8P48165 433 aa15.37■□□□□ 0.05
CYSTM1-202ENST00000504227 DPYDQ12882 1025 aa15.37■□□□□ 0.05
CYSTM1-202ENST00000504227 GIT2Q14161 759 aa15.37■□□□□ 0.05
CYSTM1-202ENST00000504227 CCDC65Q8IXS2 484 aa15.37■□□□□ 0.05
CYSTM1-202ENST00000504227 RETREG2Q8NC44 543 aa15.37■□□□□ 0.05
CYSTM1-202ENST00000504227 TRAPPC12Q8WVT3 735 aa15.37■□□□□ 0.05
CYSTM1-202ENST00000504227 SMARCE1Q969G3 411 aa15.37■□□□□ 0.05
CYSTM1-202ENST00000504227 CCDC47Q96A33 483 aaKnown RBP15.37■□□□□ 0.05
CYSTM1-202ENST00000504227 CEP89Q96ST8 783 aa15.37■□□□□ 0.05
CYSTM1-202ENST00000504227 DHX33Q9H6R0 707 aaKnown RBP15.37■□□□□ 0.05
CYSTM1-202ENST00000504227 PDLIM7Q9NR12 457 aa15.37■□□□□ 0.05
CYSTM1-202ENST00000504227 KIAA1468Q9P260 1216 aa15.37■□□□□ 0.05
CYSTM1-202ENST00000504227 HDAC6Q9UBN7 1215 aa15.37■□□□□ 0.05
CYSTM1-202ENST00000504227 KAT6AQ92794 2004 aa15.36■□□□□ 0.05
CYSTM1-202ENST00000504227 PVALEFA0A1B0GWK0 134 aa15.36■□□□□ 0.05
CYSTM1-202ENST00000504227 A0A1W2PQ45 241 aaPredicted RBP15.36■□□□□ 0.05
CYSTM1-202ENST00000504227 A0A1W2PQY0 241 aa15.36■□□□□ 0.05
CYSTM1-202ENST00000504227 GAS2O43903 313 aaKnown RBP15.36■□□□□ 0.05
CYSTM1-202ENST00000504227 IDEP14735 1019 aa15.36■□□□□ 0.05
CYSTM1-202ENST00000504227 DNM2P50570 870 aa15.36■□□□□ 0.05
CYSTM1-202ENST00000504227 RAD51AP2Q09MP3 1159 aa15.36■□□□□ 0.05
CYSTM1-202ENST00000504227 ITGA7Q13683 1181 aa15.36■□□□□ 0.05
CYSTM1-202ENST00000504227 EMC2Q15006 297 aa15.36■□□□□ 0.05
CYSTM1-202ENST00000504227 FAM47CQ5HY64 1035 aa15.36■□□□□ 0.05
CYSTM1-202ENST00000504227 FAM102BQ5T8I3 360 aa15.36■□□□□ 0.05
CYSTM1-202ENST00000504227 NFRKBQ6P4R8 1299 aa15.36■□□□□ 0.05
CYSTM1-202ENST00000504227 ANKLE1Q8NAG6 615 aa15.36■□□□□ 0.05
CYSTM1-202ENST00000504227 DNAJC19Q96DA6 116 aa15.36■□□□□ 0.05
CYSTM1-202ENST00000504227 DRC1Q96MC2 740 aa15.36■□□□□ 0.05
CYSTM1-202ENST00000504227 REEP2Q9BRK0 252 aa15.36■□□□□ 0.05
CYSTM1-202ENST00000504227 SEZ6LQ9BYH1 1024 aa15.36■□□□□ 0.05
CYSTM1-202ENST00000504227 ZHX3Q9H4I2 956 aa15.36■□□□□ 0.05
CYSTM1-202ENST00000504227 SUGCTQ9HAC7 445 aa15.36■□□□□ 0.05
CYSTM1-202ENST00000504227 STARD7Q9NQZ5 370 aa15.36■□□□□ 0.05
CYSTM1-202ENST00000504227 PANK4Q9NVE7 773 aa15.36■□□□□ 0.05
CYSTM1-202ENST00000504227 ODF2LQ9ULJ1 636 aa15.36■□□□□ 0.05
CYSTM1-202ENST00000504227 PCDHA5Q9Y5H7 936 aa15.36■□□□□ 0.05
CYSTM1-202ENST00000504227 LOXHD1Q8IVV2 1947 aa15.35■□□□□ 0.05
CYSTM1-202ENST00000504227 A0A0U1RQG5 324 aaPredicted RBP15.35■□□□□ 0.05
CYSTM1-202ENST00000504227 HIP1RO75146 1068 aa15.35■□□□□ 0.05
CYSTM1-202ENST00000504227 FAM13AO94988 1023 aa15.35■□□□□ 0.05
CYSTM1-202ENST00000504227 RPN1P04843 607 aaKnown RBP15.35■□□□□ 0.05
CYSTM1-202ENST00000504227 GAP43P17677 238 aa15.35■□□□□ 0.05
CYSTM1-202ENST00000504227 TMOD1P28289 359 aa15.35■□□□□ 0.05
CYSTM1-202ENST00000504227 CACNB1Q02641 598 aaPredicted RBP15.35■□□□□ 0.05
CYSTM1-202ENST00000504227 PTPN11Q06124 597 aaPredicted RBP15.35■□□□□ 0.05
CYSTM1-202ENST00000504227 EFCAB12Q6NXP0 572 aa15.35■□□□□ 0.05
CYSTM1-202ENST00000504227 MTHFD1LQ6UB35 978 aa15.35■□□□□ 0.05
CYSTM1-202ENST00000504227 UNC13DQ70J99 1090 aa15.35■□□□□ 0.05
CYSTM1-202ENST00000504227 MAEAQ7L5Y9 396 aa15.35■□□□□ 0.05
CYSTM1-202ENST00000504227 SESTD1Q86VW0 696 aa15.35■□□□□ 0.05
CYSTM1-202ENST00000504227 METTL13Q8N6R0 699 aa15.35■□□□□ 0.05
CYSTM1-202ENST00000504227 LMBR1Q8WVP7 490 aa15.35■□□□□ 0.05
CYSTM1-202ENST00000504227 TCP11Q8WWU5 503 aa15.35■□□□□ 0.05
CYSTM1-202ENST00000504227 KIFAP3Q92845 792 aa15.35■□□□□ 0.05
CYSTM1-202ENST00000504227 ERCC4Q92889 916 aaPredicted RBP15.35■□□□□ 0.05
CYSTM1-202ENST00000504227 GSDMAQ96QA5 445 aa15.35■□□□□ 0.05
CYSTM1-202ENST00000504227 XPNPEP1Q9NQW7 623 aa15.35■□□□□ 0.05
CYSTM1-202ENST00000504227 EXOC1Q9NV70 894 aa15.35■□□□□ 0.05
CYSTM1-202ENST00000504227 RMND1Q9NWS8 449 aa15.35■□□□□ 0.05
CYSTM1-202ENST00000504227 COL4A3BPQ9Y5P4 624 aa15.35■□□□□ 0.05
CYSTM1-202ENST00000504227 SCN10AQ9Y5Y9 1956 aa15.35■□□□□ 0.05
CYSTM1-202ENST00000504227 IGKV6-21A0A0C4DH24 114 aa15.34■□□□□ 0.05
CYSTM1-202ENST00000504227 C22orf31O95567 290 aa15.34■□□□□ 0.05
CYSTM1-202ENST00000504227 SARSP49591 514 aaKnown RBP15.34■□□□□ 0.05
CYSTM1-202ENST00000504227 MARCH8Q5T0T0 291 aa15.34■□□□□ 0.05
CYSTM1-202ENST00000504227 IER5Q5VY09 327 aa15.34■□□□□ 0.05
CYSTM1-202ENST00000504227 MYCT1Q8N699 235 aa15.34■□□□□ 0.05
CYSTM1-202ENST00000504227 SPATA20Q8TB22 786 aa15.34■□□□□ 0.05
CYSTM1-202ENST00000504227 PPP1R13LQ8WUF5 828 aa15.34■□□□□ 0.05
CYSTM1-202ENST00000504227 TMEM143Q96AN5 459 aa15.34■□□□□ 0.05
CYSTM1-202ENST00000504227 GTPBP4Q9BZE4 634 aaKnown RBP15.34■□□□□ 0.05
CYSTM1-202ENST00000504227 SENP6Q9GZR1 1112 aaPredicted RBP15.34■□□□□ 0.05
CYSTM1-202ENST00000504227 POLD4Q9HCU8 107 aa15.34■□□□□ 0.05
CYSTM1-202ENST00000504227 GTF2IRD1Q9UHL9 959 aa15.34■□□□□ 0.05
CYSTM1-202ENST00000504227 KCNG1Q9UIX4 513 aa15.34■□□□□ 0.05
CYSTM1-202ENST00000504227 TUBE1Q9UJT0 475 aa15.34■□□□□ 0.05
CYSTM1-202ENST00000504227 PCDHA2Q9Y5H9 948 aa15.34■□□□□ 0.05
CYSTM1-202ENST00000504227 GRIN2DO15399 1336 aa15.34■□□□□ 0.05
CYSTM1-202ENST00000504227 MBLAC1A4D2B0 266 aaPredicted RBP15.33■□□□□ 0.04
CYSTM1-202ENST00000504227 SFI1A8K8P3 1242 aa15.33■□□□□ 0.04
CYSTM1-202ENST00000504227 KLRC4O43908 158 aa15.33■□□□□ 0.04
CYSTM1-202ENST00000504227 CYP2C9P11712 490 aa15.33■□□□□ 0.04
CYSTM1-202ENST00000504227 HOXC8P31273 242 aa15.33■□□□□ 0.04
CYSTM1-202ENST00000504227 ADAM17P78536 824 aa15.33■□□□□ 0.04
CYSTM1-202ENST00000504227 KCNB1Q14721 858 aa15.33■□□□□ 0.04
CYSTM1-202ENST00000504227 KMT5BQ4FZB7 885 aa15.33■□□□□ 0.04
CYSTM1-202ENST00000504227 HERC4Q5GLZ8 1057 aaPredicted RBP15.33■□□□□ 0.04
CYSTM1-202ENST00000504227 NT5DC1Q5TFE4 455 aa15.33■□□□□ 0.04
CYSTM1-202ENST00000504227 SASS6Q6UVJ0 657 aa15.33■□□□□ 0.04
CYSTM1-202ENST00000504227 RBM43Q6ZSC3 357 aaKnown RBP15.33■□□□□ 0.04
CYSTM1-202ENST00000504227 LRRC71Q8N4P6 559 aa15.33■□□□□ 0.04
CYSTM1-202ENST00000504227 IFT74Q96LB3 600 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms