RNA–Protein interactions for RNA: ENST00000504223.1

SH3TC1-208, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 3

Gene SH3TC1, Length 698 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-208ENST00000504223 VTNP04004 478 aa20.26■□□□□ 0.83
SH3TC1-208ENST00000504223 LINC00271P0C7V0 271 aa20.26■□□□□ 0.83
SH3TC1-208ENST00000504223 TMEM266Q2M3C6 531 aa20.26■□□□□ 0.83
SH3TC1-208ENST00000504223 EPC2Q52LR7 807 aa20.26■□□□□ 0.83
SH3TC1-208ENST00000504223 LRRC71Q8N4P6 559 aa20.26■□□□□ 0.83
SH3TC1-208ENST00000504223 FBXO22Q8NEZ5 403 aa20.26■□□□□ 0.83
SH3TC1-208ENST00000504223 FAM20AQ96MK3 541 aa20.26■□□□□ 0.83
SH3TC1-208ENST00000504223 SAMD11Q96NU1 681 aa20.26■□□□□ 0.83
SH3TC1-208ENST00000504223 TSPYL2Q9H2G4 693 aaPredicted RBP20.26■□□□□ 0.83
SH3TC1-208ENST00000504223 SH2B1Q9NRF2 756 aaPredicted RBP20.26■□□□□ 0.83
SH3TC1-208ENST00000504223 WRAP73Q9P2S5 460 aaPredicted RBP20.26■□□□□ 0.83
SH3TC1-208ENST00000504223 NOC2LQ9Y3T9 749 aaKnown RBP20.26■□□□□ 0.83
SH3TC1-208ENST00000504223 MAGEB2O15479 319 aa20.25■□□□□ 0.83
SH3TC1-208ENST00000504223 KIZQ2M2Z5 673 aa20.25■□□□□ 0.83
SH3TC1-208ENST00000504223 METTL13Q8N6R0 699 aa20.25■□□□□ 0.83
SH3TC1-208ENST00000504223 ZNF689Q96CS4 500 aaPredicted RBP20.25■□□□□ 0.83
SH3TC1-208ENST00000504223 TBC1D32Q96NH3 1257 aa20.25■□□□□ 0.83
SH3TC1-208ENST00000504223 ASB2Q96Q27 587 aa20.25■□□□□ 0.83
SH3TC1-208ENST00000504223 ERVK-5Q9HDB9 667 aa20.25■□□□□ 0.83
SH3TC1-208ENST00000504223 GINS2Q9Y248 185 aa20.25■□□□□ 0.83
SH3TC1-208ENST00000504223 TBX3O15119 743 aa20.24■□□□□ 0.83
SH3TC1-208ENST00000504223 GPR32O75388 356 aa20.24■□□□□ 0.83
SH3TC1-208ENST00000504223 DGKIO75912 1065 aa20.24■□□□□ 0.83
SH3TC1-208ENST00000504223 CRYBB1P53674 252 aaPredicted RBP20.24■□□□□ 0.83
SH3TC1-208ENST00000504223 DRP2Q13474 957 aa20.24■□□□□ 0.83
SH3TC1-208ENST00000504223 TRIM29Q14134 588 aa20.24■□□□□ 0.83
SH3TC1-208ENST00000504223 C8orf76Q96K31 380 aa20.24■□□□□ 0.83
SH3TC1-208ENST00000504223 NIFKQ9BYG3 293 aaKnown RBP20.24■□□□□ 0.83
SH3TC1-208ENST00000504223 NRBP2Q9NSY0 501 aa20.24■□□□□ 0.83
SH3TC1-208ENST00000504223 SEPT9Q9UHD8 586 aaPredicted RBP20.24■□□□□ 0.83
SH3TC1-208ENST00000504223 ARID2Q68CP9 1835 aa20.24■□□□□ 0.83
SH3TC1-208ENST00000504223 ADGRA3Q8IWK6 1321 aa20.24■□□□□ 0.83
SH3TC1-208ENST00000504223 MGEA5O60502 916 aa20.23■□□□□ 0.83
SH3TC1-208ENST00000504223 RPS6KA5O75582 802 aa20.23■□□□□ 0.83
SH3TC1-208ENST00000504223 MRPS5P82675 430 aaKnown RBP20.23■□□□□ 0.83
SH3TC1-208ENST00000504223 MTERF2Q49AM1 385 aa20.23■□□□□ 0.83
SH3TC1-208ENST00000504223 XKR3Q5GH77 459 aa20.23■□□□□ 0.83
SH3TC1-208ENST00000504223 EFCAB12Q6NXP0 572 aa20.23■□□□□ 0.83
SH3TC1-208ENST00000504223 FAM43BQ6ZT52 329 aaPredicted RBP20.23■□□□□ 0.83
SH3TC1-208ENST00000504223 ANO5Q75V66 913 aa20.23■□□□□ 0.83
SH3TC1-208ENST00000504223 TMEM192Q8IY95 271 aa20.23■□□□□ 0.83
SH3TC1-208ENST00000504223 FIBCD1Q8N539 461 aa20.23■□□□□ 0.83
SH3TC1-208ENST00000504223 FBXO18Q8NFZ0 1043 aa20.23■□□□□ 0.83
SH3TC1-208ENST00000504223 SYMPKQ92797 1274 aaKnown RBP20.23■□□□□ 0.83
SH3TC1-208ENST00000504223 ZNF668Q96K58 619 aaPredicted RBP20.23■□□□□ 0.83
SH3TC1-208ENST00000504223 OSMRQ99650 979 aa20.23■□□□□ 0.83
SH3TC1-208ENST00000504223 NAP1L4Q99733 375 aaKnown RBP20.23■□□□□ 0.83
SH3TC1-208ENST00000504223 TMEM60Q9H2L4 133 aa20.23■□□□□ 0.83
SH3TC1-208ENST00000504223 H3BNC9 293 aa20.22■□□□□ 0.83
SH3TC1-208ENST00000504223 PSMC5P62195 406 aa20.22■□□□□ 0.83
SH3TC1-208ENST00000504223 HMGN5P82970 282 aaKnown RBP20.22■□□□□ 0.83
SH3TC1-208ENST00000504223 PLA2G4FQ68DD2 849 aa20.22■□□□□ 0.83
SH3TC1-208ENST00000504223 FAM228AQ86W67 206 aa20.22■□□□□ 0.83
SH3TC1-208ENST00000504223 NPAS4Q8IUM7 802 aa20.22■□□□□ 0.83
SH3TC1-208ENST00000504223 ZNF579Q8NAF0 562 aaKnown RBP20.22■□□□□ 0.83
SH3TC1-208ENST00000504223 ADAMTS10Q9H324 1103 aa20.22■□□□□ 0.83
SH3TC1-208ENST00000504223 RGL1Q9NZL6 768 aa20.22■□□□□ 0.83
SH3TC1-208ENST00000504223 ST3GAL5Q9UNP4 418 aa20.22■□□□□ 0.83
SH3TC1-208ENST00000504223 KIAA1671Q9BY89 1806 aa20.21■□□□□ 0.83
SH3TC1-208ENST00000504223 C5orf67F2Z3F1 127 aa20.21■□□□□ 0.83
SH3TC1-208ENST00000504223 TFF2Q03403 129 aa20.21■□□□□ 0.83
SH3TC1-208ENST00000504223 NFX1Q12986 1120 aaKnown RBP20.21■□□□□ 0.83
SH3TC1-208ENST00000504223 EPHA7Q15375 998 aa20.21■□□□□ 0.83
SH3TC1-208ENST00000504223 SKIV2LQ15477 1246 aaKnown RBP20.21■□□□□ 0.83
SH3TC1-208ENST00000504223 NCAPH2Q6IBW4 605 aa20.21■□□□□ 0.83
SH3TC1-208ENST00000504223 CLP1Q92989 425 aaKnown RBP20.21■□□□□ 0.83
SH3TC1-208ENST00000504223 TMX3Q96JJ7 454 aa20.21■□□□□ 0.83
SH3TC1-208ENST00000504223 MTMR9Q96QG7 549 aa20.21■□□□□ 0.83
SH3TC1-208ENST00000504223 RALGAPA2Q2PPJ7 1873 aa20.2■□□□□ 0.82
SH3TC1-208ENST00000504223 ATG2AQ2TAZ0 1938 aa20.2■□□□□ 0.82
SH3TC1-208ENST00000504223 BDP1A6H8Y1 2624 aa20.2■□□□□ 0.82
SH3TC1-208ENST00000504223 IGKV6-21A0A0C4DH24 114 aa20.2■□□□□ 0.82
SH3TC1-208ENST00000504223 DDX11L8A8MPP1 907 aa20.2■□□□□ 0.82
SH3TC1-208ENST00000504223 GPR182O15218 404 aa20.2■□□□□ 0.82
SH3TC1-208ENST00000504223 ATP2B1P20020 1258 aa20.2■□□□□ 0.82
SH3TC1-208ENST00000504223 TMOD1P28289 359 aa20.2■□□□□ 0.82
SH3TC1-208ENST00000504223 QARSP47897 775 aaKnown RBP20.2■□□□□ 0.82
SH3TC1-208ENST00000504223 NPEPPSP55786 919 aa20.2■□□□□ 0.82
SH3TC1-208ENST00000504223 NLRP11P59045 1033 aaKnown RBP20.2■□□□□ 0.82
SH3TC1-208ENST00000504223 TBC1D8BQ0IIM8 1120 aa20.2■□□□□ 0.82
SH3TC1-208ENST00000504223 GPM6BQ13491 265 aa20.2■□□□□ 0.82
SH3TC1-208ENST00000504223 BTG3Q14201 252 aaPredicted RBP20.2■□□□□ 0.82
SH3TC1-208ENST00000504223 CALCRLQ16602 461 aa20.2■□□□□ 0.82
SH3TC1-208ENST00000504223 DYDC2Q96IM9 177 aa20.2■□□□□ 0.82
SH3TC1-208ENST00000504223 MAP7D2Q96T17 732 aa20.2■□□□□ 0.82
SH3TC1-208ENST00000504223 LXNQ9BS40 222 aa20.2■□□□□ 0.82
SH3TC1-208ENST00000504223 RGS18Q9NS28 235 aa20.2■□□□□ 0.82
SH3TC1-208ENST00000504223 COG5Q9UP83 839 aa20.2■□□□□ 0.82
SH3TC1-208ENST00000504223 AKT3Q9Y243 479 aa20.2■□□□□ 0.82
SH3TC1-208ENST00000504223 ZBTB39O15060 712 aa20.19■□□□□ 0.82
SH3TC1-208ENST00000504223 ST18O60284 1047 aa20.19■□□□□ 0.82
SH3TC1-208ENST00000504223 NEMFO60524 1076 aa20.19■□□□□ 0.82
SH3TC1-208ENST00000504223 P4HBP07237 508 aaKnown RBP20.19■□□□□ 0.82
SH3TC1-208ENST00000504223 STAG3L1P0CL83 205 aa20.19■□□□□ 0.82
SH3TC1-208ENST00000504223 BMPR1AP36894 532 aa20.19■□□□□ 0.82
SH3TC1-208ENST00000504223 SARSP49591 514 aaKnown RBP20.19■□□□□ 0.82
SH3TC1-208ENST00000504223 GPC3P51654 580 aa20.19■□□□□ 0.82
SH3TC1-208ENST00000504223 CTTNQ14247 550 aaKnown RBP20.19■□□□□ 0.82
SH3TC1-208ENST00000504223 ODR4Q5SWX8 454 aa20.19■□□□□ 0.82
SH3TC1-208ENST00000504223 SLFN12Q8IYM2 578 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms