RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 URI1O94763 535 aaPredicted RBP23.43■■□□□ 1.34
UBE2D3-216ENST00000503742 NCBP1Q09161 790 aaKnown RBP23.43■■□□□ 1.34
UBE2D3-216ENST00000503742 ALCAMQ13740 583 aa23.43■■□□□ 1.34
UBE2D3-216ENST00000503742 UTP14CQ5TAP6 766 aaKnown RBP23.43■■□□□ 1.34
UBE2D3-216ENST00000503742 DPY19L2P1Q6NXN4 242 aa23.43■■□□□ 1.34
UBE2D3-216ENST00000503742 MAEAQ7L5Y9 396 aa23.43■■□□□ 1.34
UBE2D3-216ENST00000503742 HS2ST1Q7LGA3 356 aa23.43■■□□□ 1.34
UBE2D3-216ENST00000503742 ANKRD35Q8N283 1001 aa23.43■■□□□ 1.34
UBE2D3-216ENST00000503742 SPATC1LQ9H0A9 340 aa23.43■■□□□ 1.34
UBE2D3-216ENST00000503742 AGPAT3Q9NRZ7 376 aa23.43■■□□□ 1.34
UBE2D3-216ENST00000503742 MYO1AQ9UBC5 1043 aa23.43■■□□□ 1.34
UBE2D3-216ENST00000503742 ICAM3P32942 547 aa23.43■■□□□ 1.34
UBE2D3-216ENST00000503742 PPIL2Q13356 520 aa23.43■■□□□ 1.34
UBE2D3-216ENST00000503742 ANO5Q75V66 913 aa23.43■■□□□ 1.34
UBE2D3-216ENST00000503742 CACNA2D4Q7Z3S7 1137 aa23.43■■□□□ 1.34
UBE2D3-216ENST00000503742 GOLGA5Q8TBA6 731 aa23.43■■□□□ 1.34
UBE2D3-216ENST00000503742 ANKRD7Q92527 254 aa23.43■■□□□ 1.34
UBE2D3-216ENST00000503742 SYN2Q92777 582 aaPredicted RBP23.43■■□□□ 1.34
UBE2D3-216ENST00000503742 SLC35C1Q96A29 364 aa23.43■■□□□ 1.34
UBE2D3-216ENST00000503742 CRACR2AQ9BSW2 395 aa23.43■■□□□ 1.34
UBE2D3-216ENST00000503742 NUCKS1Q9H1E3 243 aaKnown RBP23.43■■□□□ 1.34
UBE2D3-216ENST00000503742 GANQ9H2C0 597 aa23.43■■□□□ 1.34
UBE2D3-216ENST00000503742 HAUS4Q9H6D7 363 aa23.43■■□□□ 1.34
UBE2D3-216ENST00000503742 JPH1Q9HDC5 661 aaPredicted RBP23.43■■□□□ 1.34
UBE2D3-216ENST00000503742 K7ENM7 598 aa23.42■■□□□ 1.34
UBE2D3-216ENST00000503742 STBD1O95210 358 aa23.42■■□□□ 1.34
UBE2D3-216ENST00000503742 PSMC2P35998 433 aaKnown RBP23.42■■□□□ 1.34
UBE2D3-216ENST00000503742 CNTN2Q02246 1040 aa23.42■■□□□ 1.34
UBE2D3-216ENST00000503742 STXBP2Q15833 593 aa23.42■■□□□ 1.34
UBE2D3-216ENST00000503742 XKR9Q5GH70 373 aa23.42■■□□□ 1.34
UBE2D3-216ENST00000503742 CCDC43Q96MW1 224 aaKnown RBP23.42■■□□□ 1.34
UBE2D3-216ENST00000503742 SH2D3AQ9BRG2 576 aa23.42■■□□□ 1.34
UBE2D3-216ENST00000503742 ASCC2Q9H1I8 757 aaPredicted RBP23.42■■□□□ 1.34
UBE2D3-216ENST00000503742 ST6GALNAC4Q9H4F1 302 aa23.42■■□□□ 1.34
UBE2D3-216ENST00000503742 SLC9A2Q9UBY0 812 aa23.42■■□□□ 1.34
UBE2D3-216ENST00000503742 ZNF862O60290 1169 aa23.41■■□□□ 1.34
UBE2D3-216ENST00000503742 EIF3JO75822 258 aaKnown RBP23.41■■□□□ 1.34
UBE2D3-216ENST00000503742 PLEKP08567 350 aaPredicted RBP23.41■■□□□ 1.34
UBE2D3-216ENST00000503742 NPEPPSP55786 919 aa23.41■■□□□ 1.34
UBE2D3-216ENST00000503742 IRX3P78415 501 aaPredicted RBP23.41■■□□□ 1.34
UBE2D3-216ENST00000503742 RBM10P98175 930 aaKnown RBP23.41■■□□□ 1.34
UBE2D3-216ENST00000503742 MOGSQ13724 837 aa23.41■■□□□ 1.34
UBE2D3-216ENST00000503742 ZNF569Q5MCW4 686 aa23.41■■□□□ 1.34
UBE2D3-216ENST00000503742 PLA2G4FQ68DD2 849 aa23.41■■□□□ 1.34
UBE2D3-216ENST00000503742 SLC9A9Q8IVB4 645 aa23.41■■□□□ 1.34
UBE2D3-216ENST00000503742 TMEM174Q8WUU8 243 aa23.41■■□□□ 1.34
UBE2D3-216ENST00000503742 DRC1Q96MC2 740 aa23.41■■□□□ 1.34
UBE2D3-216ENST00000503742 PLCB1Q9NQ66 1216 aa23.41■■□□□ 1.34
UBE2D3-216ENST00000503742 GABBR1Q9UBS5 961 aa23.41■■□□□ 1.34
UBE2D3-216ENST00000503742 AGTPBP1Q9UPW5 1226 aa23.41■■□□□ 1.34
UBE2D3-216ENST00000503742 CNMDO75829 334 aa23.41■■□□□ 1.34
UBE2D3-216ENST00000503742 PSAPP07602 524 aa23.41■■□□□ 1.34
UBE2D3-216ENST00000503742 ALDH5A1P51649 535 aaPredicted RBP23.41■■□□□ 1.34
UBE2D3-216ENST00000503742 MYBPC2Q14324 1141 aa23.41■■□□□ 1.34
UBE2D3-216ENST00000503742 NAA30Q147X3 362 aaPredicted RBP23.41■■□□□ 1.34
UBE2D3-216ENST00000503742 ABHD15Q6UXT9 468 aa23.41■■□□□ 1.34
UBE2D3-216ENST00000503742 FAM186BQ8IYM0 893 aa23.41■■□□□ 1.34
UBE2D3-216ENST00000503742 CCDC42Q96M95 316 aa23.41■■□□□ 1.34
UBE2D3-216ENST00000503742 TELO2Q9Y4R8 837 aa23.41■■□□□ 1.34
UBE2D3-216ENST00000503742 ZC3H4Q9UPT8 1303 aaKnown RBP23.41■■□□□ 1.34
UBE2D3-216ENST00000503742 SCN4AP35499 1836 aa23.4■■□□□ 1.34
UBE2D3-216ENST00000503742 GLTPD2A6NH11 291 aa23.4■■□□□ 1.34
UBE2D3-216ENST00000503742 DKC1O60832 514 aaKnown RBP eCLIP23.4■■□□□ 1.34
UBE2D3-216ENST00000503742 LCA5LO95447 670 aa23.4■■□□□ 1.34
UBE2D3-216ENST00000503742 FSTL1Q12841 308 aa23.4■■□□□ 1.34
UBE2D3-216ENST00000503742 TTLL12Q14166 644 aaPredicted RBP23.4■■□□□ 1.34
UBE2D3-216ENST00000503742 HGSNATQ68CP4 663 aa23.4■■□□□ 1.34
UBE2D3-216ENST00000503742 ATP6V0A1Q93050 837 aa23.4■■□□□ 1.34
UBE2D3-216ENST00000503742 NLRC4Q9NPP4 1024 aa23.4■■□□□ 1.34
UBE2D3-216ENST00000503742 MRFAP1Q9Y605 127 aa23.4■■□□□ 1.34
UBE2D3-216ENST00000503742 ARID2Q68CP9 1835 aa23.4■■□□□ 1.34
UBE2D3-216ENST00000503742 SRCAPQ6ZRS2 3230 aa23.4■■□□□ 1.34
UBE2D3-216ENST00000503742 ZNF263O14978 683 aa23.4■■□□□ 1.34
UBE2D3-216ENST00000503742 ACTR2P61160 394 aa23.4■■□□□ 1.34
UBE2D3-216ENST00000503742 POLR2FP61218 127 aaKnown RBP23.4■■□□□ 1.34
UBE2D3-216ENST00000503742 GTF2BQ00403 316 aa23.4■■□□□ 1.34
UBE2D3-216ENST00000503742 SP2Q02086 613 aa23.4■■□□□ 1.34
UBE2D3-216ENST00000503742 APBA1Q02410 837 aa23.4■■□□□ 1.34
UBE2D3-216ENST00000503742 MAPK8IP2Q13387 824 aaPredicted RBP23.4■■□□□ 1.34
UBE2D3-216ENST00000503742 DCAF17Q5H9S7 520 aaPredicted RBP23.4■■□□□ 1.34
UBE2D3-216ENST00000503742 OTUD6AQ7L8S5 288 aa23.4■■□□□ 1.34
UBE2D3-216ENST00000503742 SLC35F6Q8N357 371 aa23.4■■□□□ 1.34
UBE2D3-216ENST00000503742 TMEM206Q9H813 350 aa23.4■■□□□ 1.34
UBE2D3-216ENST00000503742 GPRC5CQ9NQ84 441 aa23.4■■□□□ 1.34
UBE2D3-216ENST00000503742 GTPBP10A4D1E9 387 aaKnown RBP23.39■■□□□ 1.33
UBE2D3-216ENST00000503742 EDNRBP24530 442 aa23.39■■□□□ 1.33
UBE2D3-216ENST00000503742 EIF4A3P38919 411 aaKnown RBP23.39■■□□□ 1.33
UBE2D3-216ENST00000503742 NCKAP1LP55160 1127 aa23.39■■□□□ 1.33
UBE2D3-216ENST00000503742 ASTE1Q2TB18 679 aaPredicted RBP23.39■■□□□ 1.33
UBE2D3-216ENST00000503742 LRRN4CLQ8ND94 238 aa23.39■■□□□ 1.33
UBE2D3-216ENST00000503742 TAF1DQ9H5J8 278 aaPredicted RBP23.39■■□□□ 1.33
UBE2D3-216ENST00000503742 TRIM10Q9UDY6 481 aa23.39■■□□□ 1.33
UBE2D3-216ENST00000503742 SSU72P8A0A1W2PR75 194 aa23.38■■□□□ 1.33
UBE2D3-216ENST00000503742 TLR2O60603 784 aa23.38■■□□□ 1.33
UBE2D3-216ENST00000503742 IPO7O95373 1038 aaKnown RBP23.38■■□□□ 1.33
UBE2D3-216ENST00000503742 PON1P27169 355 aa23.38■■□□□ 1.33
UBE2D3-216ENST00000503742 EXOC3L4Q17RC7 722 aa23.38■■□□□ 1.33
UBE2D3-216ENST00000503742 SWSAP1Q6NVH7 229 aa23.38■■□□□ 1.33
UBE2D3-216ENST00000503742 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.38■■□□□ 1.33
UBE2D3-216ENST00000503742 NCAPG2Q86XI2 1143 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms