RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 NACC1Q96RE7 527 aa18.41■□□□□ 0.54
SCLT1-205ENST00000503401 MAFO75444 373 aaPredicted RBP18.4■□□□□ 0.54
SCLT1-205ENST00000503401 UBA7P41226 1012 aa18.4■□□□□ 0.54
SCLT1-205ENST00000503401 POLGP54098 1239 aaPredicted RBP18.4■□□□□ 0.54
SCLT1-205ENST00000503401 MKRN4PQ13434 485 aaPredicted RBP18.4■□□□□ 0.54
SCLT1-205ENST00000503401 KCNK18Q7Z418 384 aa18.4■□□□□ 0.54
SCLT1-205ENST00000503401 LINC01465Q8N7H1 131 aa18.4■□□□□ 0.54
SCLT1-205ENST00000503401 VWCEQ96DN2 955 aa18.4■□□□□ 0.54
SCLT1-205ENST00000503401 ZNF668Q96K58 619 aaPredicted RBP18.4■□□□□ 0.54
SCLT1-205ENST00000503401 UBE2OQ9C0C9 1292 aaKnown RBP18.4■□□□□ 0.54
SCLT1-205ENST00000503401 ANKEF1Q9NU02 776 aa18.4■□□□□ 0.54
SCLT1-205ENST00000503401 CFAP45Q9UL16 551 aa18.4■□□□□ 0.54
SCLT1-205ENST00000503401 AKT3Q9Y243 479 aa18.4■□□□□ 0.54
SCLT1-205ENST00000503401 GINS2Q9Y248 185 aa18.4■□□□□ 0.54
SCLT1-205ENST00000503401 STK24Q9Y6E0 443 aa18.4■□□□□ 0.54
SCLT1-205ENST00000503401 CDY2AQ9Y6F7 541 aa18.4■□□□□ 0.54
SCLT1-205ENST00000503401 E9PMD0 336 aa18.39■□□□□ 0.53
SCLT1-205ENST00000503401 NBNO60934 754 aa18.39■□□□□ 0.53
SCLT1-205ENST00000503401 MRPS6P82932 125 aaKnown RBP18.39■□□□□ 0.53
SCLT1-205ENST00000503401 GRB10Q13322 594 aa18.39■□□□□ 0.53
SCLT1-205ENST00000503401 KARSQ15046 597 aaKnown RBP18.39■□□□□ 0.53
SCLT1-205ENST00000503401 ATL3Q6DD88 541 aa18.39■□□□□ 0.53
SCLT1-205ENST00000503401 C16orf59Q7L2K0 433 aa18.39■□□□□ 0.53
SCLT1-205ENST00000503401 RPAINQ86UA6 219 aa18.39■□□□□ 0.53
SCLT1-205ENST00000503401 SLC7A3Q8WY07 619 aa18.39■□□□□ 0.53
SCLT1-205ENST00000503401 SYMPKQ92797 1274 aaKnown RBP18.39■□□□□ 0.53
SCLT1-205ENST00000503401 DHX33Q9H6R0 707 aaKnown RBP18.39■□□□□ 0.53
SCLT1-205ENST00000503401 MORC2Q9Y6X9 1032 aaPredicted RBP18.39■□□□□ 0.53
SCLT1-205ENST00000503401 IGKV6-21A0A0C4DH24 114 aa18.38■□□□□ 0.53
SCLT1-205ENST00000503401 USO1O60763 962 aaKnown RBP18.38■□□□□ 0.53
SCLT1-205ENST00000503401 CAND2O75155 1236 aa18.38■□□□□ 0.53
SCLT1-205ENST00000503401 PPP6R2O75170 966 aa18.38■□□□□ 0.53
SCLT1-205ENST00000503401 MUTP22033 750 aa18.38■□□□□ 0.53
SCLT1-205ENST00000503401 TMOD1P28289 359 aa18.38■□□□□ 0.53
SCLT1-205ENST00000503401 KRT85P78386 507 aa18.38■□□□□ 0.53
SCLT1-205ENST00000503401 MGAT3Q09327 533 aa18.38■□□□□ 0.53
SCLT1-205ENST00000503401 PPIGQ13427 754 aaKnown RBP eCLIP18.38■□□□□ 0.53
SCLT1-205ENST00000503401 EMC2Q15006 297 aa18.38■□□□□ 0.53
SCLT1-205ENST00000503401 TMEM143Q96AN5 459 aa18.38■□□□□ 0.53
SCLT1-205ENST00000503401 CDK5RAP3Q96JB5 506 aa18.38■□□□□ 0.53
SCLT1-205ENST00000503401 BHMT2Q9H2M3 363 aa18.38■□□□□ 0.53
SCLT1-205ENST00000503401 CDHR5Q9HBB8 845 aa18.38■□□□□ 0.53
SCLT1-205ENST00000503401 ATP6V1DQ9Y5K8 247 aa18.38■□□□□ 0.53
SCLT1-205ENST00000503401 KDM3AQ9Y4C1 1321 aa18.38■□□□□ 0.53
SCLT1-205ENST00000503401 XRCC6P12956 609 aaKnown RBP eCLIP18.38■□□□□ 0.535e-6■■□□□ 13.3
SCLT1-205ENST00000503401 RFC5P40937 340 aa18.38■□□□□ 0.53
SCLT1-205ENST00000503401 KIZQ2M2Z5 673 aa18.38■□□□□ 0.53
SCLT1-205ENST00000503401 HYIQ5T013 277 aa18.38■□□□□ 0.53
SCLT1-205ENST00000503401 IER5Q5VY09 327 aa18.38■□□□□ 0.53
SCLT1-205ENST00000503401 MAEAQ7L5Y9 396 aa18.38■□□□□ 0.53
SCLT1-205ENST00000503401 RASSF8Q8NHQ8 419 aa18.38■□□□□ 0.53
SCLT1-205ENST00000503401 LRRC15Q8TF66 581 aa18.38■□□□□ 0.53
SCLT1-205ENST00000503401 MAP7D2Q96T17 732 aa18.38■□□□□ 0.53
SCLT1-205ENST00000503401 IL23AQ9NPF7 189 aa18.38■□□□□ 0.53
SCLT1-205ENST00000503401 XPNPEP1Q9NQW7 623 aa18.38■□□□□ 0.53
SCLT1-205ENST00000503401 DBR1Q9UK59 544 aaKnown RBP18.38■□□□□ 0.53
SCLT1-205ENST00000503401 DNM3Q9UQ16 869 aa18.38■□□□□ 0.53
SCLT1-205ENST00000503401 TRIOBPQ9H2D6 2365 aa18.37■□□□□ 0.53
SCLT1-205ENST00000503401 ARHGEF35A5YM69 484 aa18.37■□□□□ 0.53
SCLT1-205ENST00000503401 M0QZ92 97 aa18.37■□□□□ 0.53
SCLT1-205ENST00000503401 ME1P48163 572 aa18.37■□□□□ 0.53
SCLT1-205ENST00000503401 TMEM119Q4V9L6 283 aa18.37■□□□□ 0.53
SCLT1-205ENST00000503401 FAM26DQ5JW98 314 aa18.37■□□□□ 0.53
SCLT1-205ENST00000503401 C9orf50Q5SZB4 431 aa18.37■□□□□ 0.53
SCLT1-205ENST00000503401 KSR1Q8IVT5 923 aa18.37■□□□□ 0.53
SCLT1-205ENST00000503401 NME8Q8N427 588 aa18.37■□□□□ 0.53
SCLT1-205ENST00000503401 KCNG4Q8TDN1 519 aa18.37■□□□□ 0.53
SCLT1-205ENST00000503401 CALML4Q96GE6 196 aa18.37■□□□□ 0.53
SCLT1-205ENST00000503401 MTRQ99707 1265 aa18.37■□□□□ 0.53
SCLT1-205ENST00000503401 GDPD2Q9HCC8 539 aa18.37■□□□□ 0.53
SCLT1-205ENST00000503401 SUCLA2Q9P2R7 463 aaPredicted RBP18.37■□□□□ 0.53
SCLT1-205ENST00000503401 RCOR1Q9UKL0 485 aa18.37■□□□□ 0.53
SCLT1-205ENST00000503401 PCDHA7Q9UN72 937 aa18.37■□□□□ 0.53
SCLT1-205ENST00000503401 COLQQ9Y215 455 aaPredicted RBP18.37■□□□□ 0.53
SCLT1-205ENST00000503401 TRPV2Q9Y5S1 764 aa18.37■□□□□ 0.53
SCLT1-205ENST00000503401 GHRP10912 638 aa18.36■□□□□ 0.53
SCLT1-205ENST00000503401 PLCG1P19174 1290 aa18.36■□□□□ 0.53
SCLT1-205ENST00000503401 NLRP11P59045 1033 aaKnown RBP18.36■□□□□ 0.53
SCLT1-205ENST00000503401 PADI6Q6TGC4 694 aa18.36■□□□□ 0.53
SCLT1-205ENST00000503401 ZNF365Q70YC5 407 aa18.36■□□□□ 0.53
SCLT1-205ENST00000503401 LEO1Q8WVC0 666 aaPredicted RBP18.36■□□□□ 0.53
SCLT1-205ENST00000503401 SPATA32Q96LK8 384 aa18.36■□□□□ 0.53
SCLT1-205ENST00000503401 OSMRQ99650 979 aa18.36■□□□□ 0.53
SCLT1-205ENST00000503401 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.36■□□□□ 0.53
SCLT1-205ENST00000503401 CELF4Q9BZC1 486 aaKnown RBP18.36■□□□□ 0.53
SCLT1-205ENST00000503401 CCSER1Q9C0I3 900 aa18.36■□□□□ 0.53
SCLT1-205ENST00000503401 NT5C3AQ9H0P0 336 aa18.36■□□□□ 0.53
SCLT1-205ENST00000503401 PRO3102Q9H379 93 aa18.36■□□□□ 0.53
SCLT1-205ENST00000503401 ATP6V0A4Q9HBG4 840 aa18.36■□□□□ 0.53
SCLT1-205ENST00000503401 POLD4Q9HCU8 107 aa18.36■□□□□ 0.53
SCLT1-205ENST00000503401 CIZ1Q9ULV3 898 aaPredicted RBP18.36■□□□□ 0.53
SCLT1-205ENST00000503401 PPME1Q9Y570 386 aa18.36■□□□□ 0.53
SCLT1-205ENST00000503401 GPR32O75388 356 aa18.35■□□□□ 0.53
SCLT1-205ENST00000503401 DGAT1O75907 488 aa18.35■□□□□ 0.53
SCLT1-205ENST00000503401 EYA4O95677 639 aa18.35■□□□□ 0.53
SCLT1-205ENST00000503401 RFC2P35250 354 aa18.35■□□□□ 0.53
SCLT1-205ENST00000503401 DNM2P50570 870 aa18.35■□□□□ 0.53
SCLT1-205ENST00000503401 TCTN1Q2MV58 587 aa18.35■□□□□ 0.53
SCLT1-205ENST00000503401 TMEM240Q5SV17 173 aa18.35■□□□□ 0.53
SCLT1-205ENST00000503401 AXDND1Q5T1B0 1012 aaPredicted RBP18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms