RNA–Protein interactions for RNA: ENST00000503084.1

TNPO1-202, Transcript of transportin 1, humanhuman

TSL 2

Gene TNPO1, Length 623 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-202ENST00000503084 SLC24A5Q71RS6 500 aa13.23□□□□□ -0.29
TNPO1-202ENST00000503084 FTSJ3Q8IY81 847 aaKnown RBP13.23□□□□□ -0.29
TNPO1-202ENST00000503084 SLC39A11Q8N1S5 342 aa13.23□□□□□ -0.29
TNPO1-202ENST00000503084 LRRC43Q8N309 656 aa13.23□□□□□ -0.29
TNPO1-202ENST00000503084 DDX1Q92499 740 aaKnown RBP13.23□□□□□ -0.29
TNPO1-202ENST00000503084 GLG1Q92896 1179 aa13.23□□□□□ -0.29
TNPO1-202ENST00000503084 ADAM2Q99965 735 aa13.23□□□□□ -0.29
TNPO1-202ENST00000503084 BCO2Q9BYV7 579 aa13.23□□□□□ -0.29
TNPO1-202ENST00000503084 ATP6V0A4Q9HBG4 840 aa13.23□□□□□ -0.29
TNPO1-202ENST00000503084 C1orf112Q9NSG2 853 aa13.23□□□□□ -0.29
TNPO1-202ENST00000503084 RNF19AQ9NV58 838 aa13.23□□□□□ -0.29
TNPO1-202ENST00000503084 LHX6Q9UPM6 363 aa13.23□□□□□ -0.29
TNPO1-202ENST00000503084 DENND3A2RUS2 1198 aa13.22□□□□□ -0.29
TNPO1-202ENST00000503084 SPDYE4A6NLX3 237 aa13.22□□□□□ -0.29
TNPO1-202ENST00000503084 CXCL14O95715 111 aa13.22□□□□□ -0.29
TNPO1-202ENST00000503084 RPLP2P05387 115 aaKnown RBP13.22□□□□□ -0.29
TNPO1-202ENST00000503084 ZFYP08048 801 aaPredicted RBP13.22□□□□□ -0.29
TNPO1-202ENST00000503084 GBP2P32456 591 aaPredicted RBP13.22□□□□□ -0.29
TNPO1-202ENST00000503084 STARD6P59095 220 aa13.22□□□□□ -0.29
TNPO1-202ENST00000503084 RING1Q06587 406 aa13.22□□□□□ -0.29
TNPO1-202ENST00000503084 PTPN14Q15678 1187 aa13.22□□□□□ -0.29
TNPO1-202ENST00000503084 RRP12Q5JTH9 1297 aaKnown RBP13.22□□□□□ -0.29
TNPO1-202ENST00000503084 PRR23CQ6ZRP0 262 aa13.22□□□□□ -0.29
TNPO1-202ENST00000503084 ADGRF4Q8IZF3 695 aa13.22□□□□□ -0.29
TNPO1-202ENST00000503084 KDF1Q8NAX2 398 aaPredicted RBP13.22□□□□□ -0.29
TNPO1-202ENST00000503084 MYADMQ96S97 322 aa13.22□□□□□ -0.29
TNPO1-202ENST00000503084 CELF4Q9BZC1 486 aaKnown RBP13.22□□□□□ -0.29
TNPO1-202ENST00000503084 TMEM117Q9H0C3 514 aa13.22□□□□□ -0.29
TNPO1-202ENST00000503084 ZBP1Q9H171 429 aa13.22□□□□□ -0.29
TNPO1-202ENST00000503084 RGS18Q9NS28 235 aa13.22□□□□□ -0.29
TNPO1-202ENST00000503084 TOMM22Q9NS69 142 aa13.22□□□□□ -0.29
TNPO1-202ENST00000503084 EPS15L1Q9UBC2 864 aa13.22□□□□□ -0.29
TNPO1-202ENST00000503084 LAMA4Q16363 1823 aa13.22□□□□□ -0.29
TNPO1-202ENST00000503084 SPATA31C2B4DYI2 1134 aa13.21□□□□□ -0.29
TNPO1-202ENST00000503084 TCF7P36402 384 aaPredicted RBP13.21□□□□□ -0.29
TNPO1-202ENST00000503084 GNPTABQ3T906 1256 aa13.21□□□□□ -0.29
TNPO1-202ENST00000503084 LAIR1Q6GTX8 287 aa13.21□□□□□ -0.29
TNPO1-202ENST00000503084 TMEM87AQ8NBN3 555 aa13.21□□□□□ -0.29
TNPO1-202ENST00000503084 CASD1Q96PB1 797 aa13.21□□□□□ -0.29
TNPO1-202ENST00000503084 INPP4AQ96PE3 977 aaPredicted RBP13.21□□□□□ -0.29
TNPO1-202ENST00000503084 SLC2A4RGQ9NR83 387 aa13.21□□□□□ -0.29
TNPO1-202ENST00000503084 SEMA4GQ9NTN9 838 aa13.21□□□□□ -0.29
TNPO1-202ENST00000503084 TMEM161AQ9NX61 479 aa13.21□□□□□ -0.29
TNPO1-202ENST00000503084 MTF2Q9Y483 593 aaPredicted RBP13.21□□□□□ -0.29
TNPO1-202ENST00000503084 PCDHA1Q9Y5I3 950 aa13.21□□□□□ -0.29
TNPO1-202ENST00000503084 KDM3AQ9Y4C1 1321 aa13.2□□□□□ -0.3
TNPO1-202ENST00000503084 SRRM3A6NNA2 597 aaPredicted RBP13.2□□□□□ -0.3
TNPO1-202ENST00000503084 LRP3O75074 770 aa13.2□□□□□ -0.3
TNPO1-202ENST00000503084 RAB11FIP3O75154 756 aa13.2□□□□□ -0.3
TNPO1-202ENST00000503084 NCLP19338 710 aaKnown RBP13.2□□□□□ -0.3
TNPO1-202ENST00000503084 VPS52Q8N1B4 723 aa13.2□□□□□ -0.3
TNPO1-202ENST00000503084 PRMT8Q9NR22 394 aaPredicted RBP13.2□□□□□ -0.3
TNPO1-202ENST00000503084 TCP11L1Q9NUJ3 509 aa13.2□□□□□ -0.3
TNPO1-202ENST00000503084 ERAP1Q9NZ08 941 aa13.2□□□□□ -0.3
TNPO1-202ENST00000503084 ANAPC4Q9UJX5 808 aa13.2□□□□□ -0.3
TNPO1-202ENST00000503084 RAB23Q9ULC3 237 aa13.2□□□□□ -0.3
TNPO1-202ENST00000503084 NOC2LQ9Y3T9 749 aaKnown RBP13.2□□□□□ -0.3
TNPO1-202ENST00000503084 CLUHO75153 1309 aa13.19□□□□□ -0.3
TNPO1-202ENST00000503084 KANSL1LA0AUZ9 987 aa13.19□□□□□ -0.3
TNPO1-202ENST00000503084 ZNF316A6NFI3 1004 aaPredicted RBP13.19□□□□□ -0.3
TNPO1-202ENST00000503084 FIBPO43427 364 aa13.19□□□□□ -0.3
TNPO1-202ENST00000503084 RETP07949 1114 aa13.19□□□□□ -0.3
TNPO1-202ENST00000503084 FGRP09769 529 aa13.19□□□□□ -0.3
TNPO1-202ENST00000503084 METAP2P50579 478 aaKnown RBP eCLIP13.19□□□□□ -0.3
TNPO1-202ENST00000503084 MRPS9P82933 396 aaKnown RBP13.19□□□□□ -0.3
TNPO1-202ENST00000503084 KRT76Q01546 638 aa13.19□□□□□ -0.3
TNPO1-202ENST00000503084 HTR4Q13639 388 aa13.19□□□□□ -0.3
TNPO1-202ENST00000503084 UBXN2BQ14CS0 331 aa13.19□□□□□ -0.3
TNPO1-202ENST00000503084 TSHZ3Q63HK5 1081 aa13.19□□□□□ -0.3
TNPO1-202ENST00000503084 IL31Q6EBC2 164 aa13.19□□□□□ -0.3
TNPO1-202ENST00000503084 C15orf39Q6ZRI6 1047 aa13.19□□□□□ -0.3
TNPO1-202ENST00000503084 TMEM173Q86WV6 379 aaPredicted RBP13.19□□□□□ -0.3
TNPO1-202ENST00000503084 ST13P5Q8NFI4 369 aaPredicted RBP13.19□□□□□ -0.3
TNPO1-202ENST00000503084 TRAPPC12Q8WVT3 735 aa13.19□□□□□ -0.3
TNPO1-202ENST00000503084 TMEM40Q8WWA1 233 aa13.19□□□□□ -0.3
TNPO1-202ENST00000503084 NXPE3Q969Y0 559 aa13.19□□□□□ -0.3
TNPO1-202ENST00000503084 DDX23Q9BUQ8 820 aaKnown RBP13.19□□□□□ -0.3
TNPO1-202ENST00000503084 GINS2Q9Y248 185 aa13.19□□□□□ -0.3
TNPO1-202ENST00000503084 LAMA5O15230 3695 aa13.18□□□□□ -0.3
TNPO1-202ENST00000503084 NT5C1B-RDH14C9J2C7 533 aa13.18□□□□□ -0.3
TNPO1-202ENST00000503084 TAF4O00268 1085 aa13.18□□□□□ -0.3
TNPO1-202ENST00000503084 DHX16O60231 1041 aaKnown RBP13.18□□□□□ -0.3
TNPO1-202ENST00000503084 RPS6KA5O75582 802 aa13.18□□□□□ -0.3
TNPO1-202ENST00000503084 INSRRP14616 1297 aa13.18□□□□□ -0.3
TNPO1-202ENST00000503084 FAM189BP81408 668 aa13.18□□□□□ -0.3
TNPO1-202ENST00000503084 BMS1Q14692 1282 aaKnown RBP13.18□□□□□ -0.3
TNPO1-202ENST00000503084 WTAPQ15007 396 aa13.18□□□□□ -0.3
TNPO1-202ENST00000503084 CSRP2Q16527 193 aa13.18□□□□□ -0.3
TNPO1-202ENST00000503084 SHDQ96IW2 340 aa13.18□□□□□ -0.3
TNPO1-202ENST00000503084 TMEM121BQ9BXQ6 578 aaPredicted RBP13.18□□□□□ -0.3
TNPO1-202ENST00000503084 ELAC1Q9H777 363 aaKnown RBP13.18□□□□□ -0.3
TNPO1-202ENST00000503084 JMJD4Q9H9V9 463 aa13.18□□□□□ -0.3
TNPO1-202ENST00000503084 WDR6Q9NNW5 1121 aaKnown RBP13.18□□□□□ -0.3
TNPO1-202ENST00000503084 ECHDC1Q9NTX5 307 aa13.18□□□□□ -0.3
TNPO1-202ENST00000503084 ST3GAL5Q9UNP4 418 aa13.18□□□□□ -0.3
TNPO1-202ENST00000503084 IRAK3Q9Y616 596 aa13.18□□□□□ -0.3
TNPO1-202ENST00000503084 MYH15Q9Y2K3 1946 aa13.17□□□□□ -0.3
TNPO1-202ENST00000503084 FRMPD4Q14CM0 1322 aa13.17□□□□□ -0.3
TNPO1-202ENST00000503084 PPP1R11O60927 126 aaPredicted RBP13.17□□□□□ -0.3
TNPO1-202ENST00000503084 CTSAP10619 480 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms