RNA–Protein interactions for RNA: ENST00000502443.1

USP46-203, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-203ENST00000502443 FBXO47Q5MNV8 452 aa8.16□□□□□ -1.1
USP46-203ENST00000502443 HAUS3Q68CZ6 603 aa8.16□□□□□ -1.1
USP46-203ENST00000502443 FAM109BQ6ICB4 259 aaPredicted RBP8.16□□□□□ -1.1
USP46-203ENST00000502443 FAM173BQ6P4H8 233 aa8.16□□□□□ -1.1
USP46-203ENST00000502443 IGSF22Q8N9C0 903 aa8.16□□□□□ -1.1
USP46-203ENST00000502443 ZNF579Q8NAF0 562 aaKnown RBP8.16□□□□□ -1.1
USP46-203ENST00000502443 PIGOQ8TEQ8 1089 aa8.16□□□□□ -1.1
USP46-203ENST00000502443 SLC7A3Q8WY07 619 aa8.16□□□□□ -1.1
USP46-203ENST00000502443 SEPT8Q92599 483 aa8.16□□□□□ -1.1
USP46-203ENST00000502443 CCDC43Q96MW1 224 aaKnown RBP8.16□□□□□ -1.1
USP46-203ENST00000502443 CEP89Q96ST8 783 aa8.16□□□□□ -1.1
USP46-203ENST00000502443 JPH2Q9BR39 696 aaPredicted RBP8.16□□□□□ -1.1
USP46-203ENST00000502443 POLR3CQ9BUI4 534 aaPredicted RBP8.16□□□□□ -1.1
USP46-203ENST00000502443 ZSCAN16Q9H4T2 348 aaPredicted RBP8.16□□□□□ -1.1
USP46-203ENST00000502443 CDHR5Q9HBB8 845 aa8.16□□□□□ -1.1
USP46-203ENST00000502443 TUFT1Q9NNX1 390 aa8.16□□□□□ -1.1
USP46-203ENST00000502443 ARID2Q68CP9 1835 aa8.15□□□□□ -1.1
USP46-203ENST00000502443 KDM3AQ9Y4C1 1321 aa8.15□□□□□ -1.1
USP46-203ENST00000502443 IGKV6-21A0A0C4DH24 114 aa8.15□□□□□ -1.1
USP46-203ENST00000502443 VWA3AA6NCI4 1184 aa8.15□□□□□ -1.1
USP46-203ENST00000502443 GRXCR1A8MXD5 290 aa8.15□□□□□ -1.1
USP46-203ENST00000502443 EFCAB14O75071 495 aa8.15□□□□□ -1.1
USP46-203ENST00000502443 GPR32O75388 356 aa8.15□□□□□ -1.1
USP46-203ENST00000502443 BMP15O95972 392 aa8.15□□□□□ -1.1
USP46-203ENST00000502443 XRCC6P12956 609 aaKnown RBP eCLIP8.15□□□□□ -1.1
USP46-203ENST00000502443 RPA1P27694 616 aa8.15□□□□□ -1.1
USP46-203ENST00000502443 CDC25AP30304 524 aa8.15□□□□□ -1.1
USP46-203ENST00000502443 CD52P31358 61 aa8.15□□□□□ -1.1
USP46-203ENST00000502443 CCT6AP40227 531 aaKnown RBP8.15□□□□□ -1.1
USP46-203ENST00000502443 RFC5P40937 340 aa8.15□□□□□ -1.1
USP46-203ENST00000502443 WDR5P61964 334 aaKnown RBP8.15□□□□□ -1.1
USP46-203ENST00000502443 SMAD3P84022 425 aaKnown RBP8.15□□□□□ -1.1
USP46-203ENST00000502443 CEBPZQ03701 1054 aaKnown RBP8.15□□□□□ -1.1
USP46-203ENST00000502443 PAK2Q13177 524 aa8.15□□□□□ -1.1
USP46-203ENST00000502443 DRP2Q13474 957 aa8.15□□□□□ -1.1
USP46-203ENST00000502443 BECN1Q14457 450 aa8.15□□□□□ -1.1
USP46-203ENST00000502443 FOXD4L5Q5VV16 416 aaPredicted RBP8.15□□□□□ -1.1
USP46-203ENST00000502443 KRT79Q5XKE5 535 aa8.15□□□□□ -1.1
USP46-203ENST00000502443 ARL6IP4Q66PJ3 421 aaKnown RBP8.15□□□□□ -1.1
USP46-203ENST00000502443 POTEGQ6S5H5 508 aa8.15□□□□□ -1.1
USP46-203ENST00000502443 TSHZ1Q6ZSZ6 1077 aa8.15□□□□□ -1.1
USP46-203ENST00000502443 EXOC8Q8IYI6 725 aa8.15□□□□□ -1.1
USP46-203ENST00000502443 LINC01465Q8N7H1 131 aa8.15□□□□□ -1.1
USP46-203ENST00000502443 USP38Q8NB14 1042 aa8.15□□□□□ -1.1
USP46-203ENST00000502443 SNX29Q8TEQ0 813 aa8.15□□□□□ -1.1
USP46-203ENST00000502443 FOXD4L4Q8WXT5 416 aaPredicted RBP8.15□□□□□ -1.1
USP46-203ENST00000502443 APBB2Q92870 758 aa8.15□□□□□ -1.1
USP46-203ENST00000502443 ZNF668Q96K58 619 aaPredicted RBP8.15□□□□□ -1.1
USP46-203ENST00000502443 SCLT1Q96NL6 688 aa8.15□□□□□ -1.1
USP46-203ENST00000502443 NACC1Q96RE7 527 aa8.15□□□□□ -1.1
USP46-203ENST00000502443 OSMRQ99650 979 aa8.15□□□□□ -1.1
USP46-203ENST00000502443 DHX33Q9H6R0 707 aaKnown RBP8.15□□□□□ -1.1
USP46-203ENST00000502443 AGO3Q9H9G7 860 aaKnown RBP8.15□□□□□ -1.1
USP46-203ENST00000502443 BMP2KQ9NSY1 1161 aaPredicted RBP8.15□□□□□ -1.1
USP46-203ENST00000502443 ANKEF1Q9NU02 776 aa8.15□□□□□ -1.1
USP46-203ENST00000502443 SUCLA2Q9P2R7 463 aaPredicted RBP8.15□□□□□ -1.1
USP46-203ENST00000502443 PPME1Q9Y570 386 aa8.15□□□□□ -1.1
USP46-203ENST00000502443 CLIC4Q9Y696 253 aa8.15□□□□□ -1.1
USP46-203ENST00000502443 STK24Q9Y6E0 443 aa8.15□□□□□ -1.1
USP46-203ENST00000502443 SQORQ9Y6N5 450 aa8.15□□□□□ -1.1
USP46-203ENST00000502443 MICAL3Q7RTP6 2002 aa8.15□□□□□ -1.11
USP46-203ENST00000502443 PP2D1A8MPX8 630 aa8.14□□□□□ -1.11
USP46-203ENST00000502443 GAS2O43903 313 aaKnown RBP8.14□□□□□ -1.11
USP46-203ENST00000502443 RPS6KA5O75582 802 aa8.14□□□□□ -1.11
USP46-203ENST00000502443 DGAT1O75907 488 aa8.14□□□□□ -1.11
USP46-203ENST00000502443 AMHP03971 560 aa8.14□□□□□ -1.11
USP46-203ENST00000502443 ZSCAN22P10073 491 aaPredicted RBP8.14□□□□□ -1.11
USP46-203ENST00000502443 MUTP22033 750 aa8.14□□□□□ -1.11
USP46-203ENST00000502443 PBX2P40425 430 aa8.14□□□□□ -1.11
USP46-203ENST00000502443 RARRES1P49788 294 aa8.14□□□□□ -1.11
USP46-203ENST00000502443 RABGGTBP53611 331 aa8.14□□□□□ -1.11
USP46-203ENST00000502443 CRYBB1P53674 252 aaPredicted RBP8.14□□□□□ -1.11
USP46-203ENST00000502443 DEFB103AP81534 67 aa8.14□□□□□ -1.11
USP46-203ENST00000502443 CDC42EP1Q00587 391 aa8.14□□□□□ -1.11
USP46-203ENST00000502443 NFX1Q12986 1120 aaKnown RBP8.14□□□□□ -1.11
USP46-203ENST00000502443 MKRN4PQ13434 485 aaPredicted RBP8.14□□□□□ -1.11
USP46-203ENST00000502443 EMC2Q15006 297 aa8.14□□□□□ -1.11
USP46-203ENST00000502443 ZRSR1Q15695 479 aaKnown RBP8.14□□□□□ -1.11
USP46-203ENST00000502443 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.14□□□□□ -1.11
USP46-203ENST00000502443 TMCO2Q7Z6W1 182 aaPredicted RBP8.14□□□□□ -1.11
USP46-203ENST00000502443 RHPN2Q8IUC4 686 aa8.14□□□□□ -1.11
USP46-203ENST00000502443 MYOCDQ8IZQ8 938 aa8.14□□□□□ -1.11
USP46-203ENST00000502443 ZNF710Q8N1W2 664 aa8.14□□□□□ -1.11
USP46-203ENST00000502443 PHOSPHO2Q8TCD6 241 aa8.14□□□□□ -1.11
USP46-203ENST00000502443 TMEM40Q8WWA1 233 aa8.14□□□□□ -1.11
USP46-203ENST00000502443 NLRP7Q8WX94 980 aa8.14□□□□□ -1.11
USP46-203ENST00000502443 TMEM143Q96AN5 459 aa8.14□□□□□ -1.11
USP46-203ENST00000502443 SLC9A7Q96T83 725 aa8.14□□□□□ -1.11
USP46-203ENST00000502443 MTRQ99707 1265 aa8.14□□□□□ -1.11
USP46-203ENST00000502443 ZBED2Q9BTP6 218 aa8.14□□□□□ -1.11
USP46-203ENST00000502443 PBX4Q9BYU1 374 aa8.14□□□□□ -1.11
USP46-203ENST00000502443 ADAMTS10Q9H324 1103 aa8.14□□□□□ -1.11
USP46-203ENST00000502443 DDX19AQ9NUU7 478 aaKnown RBP8.14□□□□□ -1.11
USP46-203ENST00000502443 MSRAQ9UJ68 235 aa8.14□□□□□ -1.11
USP46-203ENST00000502443 PADI3Q9ULW8 664 aa8.14□□□□□ -1.11
USP46-203ENST00000502443 KIAA1024Q9UPX6 916 aa8.14□□□□□ -1.11
USP46-203ENST00000502443 NOC2LQ9Y3T9 749 aaKnown RBP8.14□□□□□ -1.11
USP46-203ENST00000502443 GBF1Q92538 1859 aa8.14□□□□□ -1.11
USP46-203ENST00000502443 LAMA3Q16787 3333 aa8.13□□□□□ -1.11
USP46-203ENST00000502443 A0A087WZ62 844 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms