RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 PPP6R2O75170 966 aa17.36■□□□□ 0.37
CPNE1-228ENST00000498814 CHRNA1P02708 482 aa17.36■□□□□ 0.37
CPNE1-228ENST00000498814 PFKMP08237 780 aa17.36■□□□□ 0.37
CPNE1-228ENST00000498814 CTSHP09668 335 aa17.36■□□□□ 0.37
CPNE1-228ENST00000498814 RARRES1P49788 294 aa17.36■□□□□ 0.37
CPNE1-228ENST00000498814 EPHB4P54760 987 aa17.36■□□□□ 0.37
CPNE1-228ENST00000498814 MBTPS1Q14703 1052 aa17.36■□□□□ 0.37
CPNE1-228ENST00000498814 GPNMBQ14956 572 aa17.36■□□□□ 0.37
CPNE1-228ENST00000498814 C16orf59Q7L2K0 433 aa17.36■□□□□ 0.37
CPNE1-228ENST00000498814 ZNF710Q8N1W2 664 aa17.36■□□□□ 0.37
CPNE1-228ENST00000498814 KRI1Q8N9T8 703 aaKnown RBP17.36■□□□□ 0.37
CPNE1-228ENST00000498814 SLC7A3Q8WY07 619 aa17.36■□□□□ 0.37
CPNE1-228ENST00000498814 VWCEQ96DN2 955 aa17.36■□□□□ 0.37
CPNE1-228ENST00000498814 CSRNP2Q9H175 543 aa17.36■□□□□ 0.37
CPNE1-228ENST00000498814 SUGCTQ9HAC7 445 aa17.36■□□□□ 0.37
CPNE1-228ENST00000498814 DDX19AQ9NUU7 478 aaKnown RBP17.36■□□□□ 0.37
CPNE1-228ENST00000498814 KDM3AQ9Y4C1 1321 aa17.36■□□□□ 0.37
CPNE1-228ENST00000498814 A0A087WWV3 80 aa17.35■□□□□ 0.37
CPNE1-228ENST00000498814 GAS2O43903 313 aaKnown RBP17.35■□□□□ 0.37
CPNE1-228ENST00000498814 NBNO60934 754 aa17.35■□□□□ 0.37
CPNE1-228ENST00000498814 CXCL10P02778 98 aa17.35■□□□□ 0.37
CPNE1-228ENST00000498814 UBA7P41226 1012 aa17.35■□□□□ 0.37
CPNE1-228ENST00000498814 DNM2P50570 870 aa17.35■□□□□ 0.37
CPNE1-228ENST00000498814 CLCN3P51790 818 aa17.35■□□□□ 0.37
CPNE1-228ENST00000498814 POLGP54098 1239 aaPredicted RBP17.35■□□□□ 0.37
CPNE1-228ENST00000498814 MKRN4PQ13434 485 aaPredicted RBP17.35■□□□□ 0.37
CPNE1-228ENST00000498814 CABP7Q86V35 215 aa17.35■□□□□ 0.37
CPNE1-228ENST00000498814 LRRC71Q8N4P6 559 aa17.35■□□□□ 0.37
CPNE1-228ENST00000498814 CCDC43Q96MW1 224 aaKnown RBP17.35■□□□□ 0.37
CPNE1-228ENST00000498814 PNMA5Q96PV4 448 aa17.35■□□□□ 0.37
CPNE1-228ENST00000498814 MAP7D2Q96T17 732 aa17.35■□□□□ 0.37
CPNE1-228ENST00000498814 CELF4Q9BZC1 486 aaKnown RBP17.35■□□□□ 0.37
CPNE1-228ENST00000498814 NT5C3AQ9H0P0 336 aa17.35■□□□□ 0.37
CPNE1-228ENST00000498814 DNM3Q9UQ16 869 aa17.35■□□□□ 0.37
CPNE1-228ENST00000498814 TRPV2Q9Y5S1 764 aa17.35■□□□□ 0.37
CPNE1-228ENST00000498814 CDY2AQ9Y6F7 541 aa17.35■□□□□ 0.37
CPNE1-228ENST00000498814 M0QZ92 97 aa17.34■□□□□ 0.37
CPNE1-228ENST00000498814 DGAT1O75907 488 aa17.34■□□□□ 0.37
CPNE1-228ENST00000498814 RANBP2P49792 3224 aaKnown RBP17.34■□□□□ 0.37
CPNE1-228ENST00000498814 GRB10Q13322 594 aa17.34■□□□□ 0.37
CPNE1-228ENST00000498814 EMC2Q15006 297 aa17.34■□□□□ 0.37
CPNE1-228ENST00000498814 PSRC1Q6PGN9 363 aaPredicted RBP17.34■□□□□ 0.37
CPNE1-228ENST00000498814 DEFB128Q7Z7B8 93 aa17.34■□□□□ 0.37
CPNE1-228ENST00000498814 KCNG4Q8TDN1 519 aa17.34■□□□□ 0.37
CPNE1-228ENST00000498814 CLIC6Q96NY7 704 aa17.34■□□□□ 0.37
CPNE1-228ENST00000498814 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.34■□□□□ 0.378e-7■□□□□ 9.1
CPNE1-228ENST00000498814 CCSER1Q9C0I3 900 aa17.34■□□□□ 0.37
CPNE1-228ENST00000498814 TSHZ2Q9NRE2 1034 aa17.34■□□□□ 0.37
CPNE1-228ENST00000498814 RCOR1Q9UKL0 485 aa17.34■□□□□ 0.37
CPNE1-228ENST00000498814 CIZ1Q9ULV3 898 aaPredicted RBP17.34■□□□□ 0.37
CPNE1-228ENST00000498814 COLQQ9Y215 455 aaPredicted RBP17.34■□□□□ 0.37
CPNE1-228ENST00000498814 AKT3Q9Y243 479 aa17.34■□□□□ 0.37
CPNE1-228ENST00000498814 RBM19Q9Y4C8 960 aaKnown RBP17.34■□□□□ 0.37
CPNE1-228ENST00000498814 SQORQ9Y6N5 450 aa17.34■□□□□ 0.37
CPNE1-228ENST00000498814 A0A1W2PPC1 479 aa17.33■□□□□ 0.36
CPNE1-228ENST00000498814 ARHGEF35A5YM69 484 aa17.33■□□□□ 0.36
CPNE1-228ENST00000498814 EYA4O95677 639 aa17.33■□□□□ 0.36
CPNE1-228ENST00000498814 FGBP02675 491 aa17.33■□□□□ 0.36
CPNE1-228ENST00000498814 VTNP04004 478 aa17.33■□□□□ 0.36
CPNE1-228ENST00000498814 ACRP10323 421 aa17.33■□□□□ 0.36
CPNE1-228ENST00000498814 CDC42EP1Q00587 391 aa17.33■□□□□ 0.36
CPNE1-228ENST00000498814 TMEM62Q0P6H9 643 aa17.33■□□□□ 0.36
CPNE1-228ENST00000498814 DRP2Q13474 957 aa17.33■□□□□ 0.36
CPNE1-228ENST00000498814 TMEM119Q4V9L6 283 aa17.33■□□□□ 0.36
CPNE1-228ENST00000498814 TMEM240Q5SV17 173 aa17.33■□□□□ 0.36
CPNE1-228ENST00000498814 ZNF365Q70YC5 407 aa17.33■□□□□ 0.36
CPNE1-228ENST00000498814 TCP11Q8WWU5 503 aa17.33■□□□□ 0.36
CPNE1-228ENST00000498814 CALML4Q96GE6 196 aa17.33■□□□□ 0.36
CPNE1-228ENST00000498814 EPSTI1Q96J88 318 aa17.33■□□□□ 0.36
CPNE1-228ENST00000498814 CDK5RAP3Q96JB5 506 aa17.33■□□□□ 0.36
CPNE1-228ENST00000498814 MTRQ99707 1265 aa17.33■□□□□ 0.36
CPNE1-228ENST00000498814 XPNPEP1Q9NQW7 623 aa17.33■□□□□ 0.36
CPNE1-228ENST00000498814 SUCLA2Q9P2R7 463 aaPredicted RBP17.33■□□□□ 0.36
CPNE1-228ENST00000498814 E9PMD0 336 aa17.32■□□□□ 0.36
CPNE1-228ENST00000498814 GPR32O75388 356 aa17.32■□□□□ 0.36
CPNE1-228ENST00000498814 CRYBB1P53674 252 aaPredicted RBP17.32■□□□□ 0.36
CPNE1-228ENST00000498814 KRT85P78386 507 aa17.32■□□□□ 0.36
CPNE1-228ENST00000498814 LPIN1Q14693 890 aa17.32■□□□□ 0.36
CPNE1-228ENST00000498814 SHHQ15465 462 aa17.32■□□□□ 0.36
CPNE1-228ENST00000498814 ZRSR1Q15695 479 aaKnown RBP17.32■□□□□ 0.36
CPNE1-228ENST00000498814 PLEKHG4Q58EX7 1191 aa17.32■□□□□ 0.36
CPNE1-228ENST00000498814 SPECC1Q5M775 1068 aa17.32■□□□□ 0.36
CPNE1-228ENST00000498814 FBXO47Q5MNV8 452 aa17.32■□□□□ 0.36
CPNE1-228ENST00000498814 PADI6Q6TGC4 694 aa17.32■□□□□ 0.36
CPNE1-228ENST00000498814 USP49Q70CQ1 688 aa17.32■□□□□ 0.36
CPNE1-228ENST00000498814 KCNK18Q7Z418 384 aa17.32■□□□□ 0.36
CPNE1-228ENST00000498814 TDHQ8IZJ6 230 aa17.32■□□□□ 0.36
CPNE1-228ENST00000498814 USP38Q8NB14 1042 aa17.32■□□□□ 0.36
CPNE1-228ENST00000498814 SYMPKQ92797 1274 aaKnown RBP17.32■□□□□ 0.36
CPNE1-228ENST00000498814 OSBPL7Q9BZF2 842 aa17.32■□□□□ 0.36
CPNE1-228ENST00000498814 BHMT2Q9H2M3 363 aa17.32■□□□□ 0.36
CPNE1-228ENST00000498814 ADAMTS10Q9H324 1103 aa17.32■□□□□ 0.36
CPNE1-228ENST00000498814 ATP6V0A4Q9HBG4 840 aa17.32■□□□□ 0.36
CPNE1-228ENST00000498814 CUTAO60888 179 aa17.31■□□□□ 0.36
CPNE1-228ENST00000498814 CYP11B2P19099 503 aa17.31■□□□□ 0.36
CPNE1-228ENST00000498814 GPC3P51654 580 aa17.31■□□□□ 0.36
CPNE1-228ENST00000498814 NLRP11P59045 1033 aaKnown RBP17.31■□□□□ 0.36
CPNE1-228ENST00000498814 KIZQ2M2Z5 673 aa17.31■□□□□ 0.36
CPNE1-228ENST00000498814 C9orf50Q5SZB4 431 aa17.31■□□□□ 0.36
CPNE1-228ENST00000498814 CNKSR3Q6P9H4 555 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms