RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 CELF4Q9BZC1 486 aaKnown RBP18.72■□□□□ 0.59
PRKCB-210ENST00000498739 OSBPL7Q9BZF2 842 aa18.72■□□□□ 0.59
PRKCB-210ENST00000498739 MTIF3Q9H2K0 278 aaKnown RBP18.72■□□□□ 0.59
PRKCB-210ENST00000498739 ANKEF1Q9NU02 776 aa18.72■□□□□ 0.59
PRKCB-210ENST00000498739 CEP290O15078 2479 aa18.71■□□□□ 0.59
PRKCB-210ENST00000498739 MUTP22033 750 aa18.71■□□□□ 0.59
PRKCB-210ENST00000498739 RFC5P40937 340 aa18.71■□□□□ 0.59
PRKCB-210ENST00000498739 PTPAQ15257 358 aa18.71■□□□□ 0.59
PRKCB-210ENST00000498739 ECM1Q16610 540 aa18.71■□□□□ 0.59
PRKCB-210ENST00000498739 NACC1Q96RE7 527 aa18.71■□□□□ 0.59
PRKCB-210ENST00000498739 IGKV6-21A0A0C4DH24 114 aa18.7■□□□□ 0.58
PRKCB-210ENST00000498739 XRCC6P12956 609 aaKnown RBP eCLIP18.7■□□□□ 0.581e-7■■■■□ 19.5
PRKCB-210ENST00000498739 MARCKSP29966 332 aaPredicted RBP18.7■□□□□ 0.58
PRKCB-210ENST00000498739 RARRES1P49788 294 aa18.7■□□□□ 0.58
PRKCB-210ENST00000498739 DNM2P50570 870 aa18.7■□□□□ 0.58
PRKCB-210ENST00000498739 MKRN4PQ13434 485 aaPredicted RBP18.7■□□□□ 0.58
PRKCB-210ENST00000498739 DRP2Q13474 957 aa18.7■□□□□ 0.58
PRKCB-210ENST00000498739 LPIN1Q14693 890 aa18.7■□□□□ 0.58
PRKCB-210ENST00000498739 KIZQ2M2Z5 673 aa18.7■□□□□ 0.58
PRKCB-210ENST00000498739 TCTN1Q2MV58 587 aa18.7■□□□□ 0.58
PRKCB-210ENST00000498739 PLEKHG4Q58EX7 1191 aa18.7■□□□□ 0.58
PRKCB-210ENST00000498739 FBXO47Q5MNV8 452 aa18.7■□□□□ 0.58
PRKCB-210ENST00000498739 EXOC8Q8IYI6 725 aa18.7■□□□□ 0.58
PRKCB-210ENST00000498739 DBF4BQ8NFT6 615 aa18.7■□□□□ 0.58
PRKCB-210ENST00000498739 DHX33Q9H6R0 707 aaKnown RBP18.7■□□□□ 0.58
PRKCB-210ENST00000498739 DDX19AQ9NUU7 478 aaKnown RBP18.7■□□□□ 0.58
PRKCB-210ENST00000498739 CXXC1Q9P0U4 656 aaPredicted RBP18.7■□□□□ 0.58
PRKCB-210ENST00000498739 DAXXQ9UER7 740 aaPredicted RBP18.7■□□□□ 0.58
PRKCB-210ENST00000498739 KIAA1024Q9UPX6 916 aa18.7■□□□□ 0.58
PRKCB-210ENST00000498739 KDM3AQ9Y4C1 1321 aa18.7■□□□□ 0.58
PRKCB-210ENST00000498739 NLRP11P59045 1033 aaKnown RBP18.69■□□□□ 0.58
PRKCB-210ENST00000498739 GRIN1Q05586 938 aa18.69■□□□□ 0.58
PRKCB-210ENST00000498739 EMC2Q15006 297 aa18.69■□□□□ 0.58
PRKCB-210ENST00000498739 ZRSR1Q15695 479 aaKnown RBP18.69■□□□□ 0.58
PRKCB-210ENST00000498739 RASIP1Q5U651 963 aa18.69■□□□□ 0.58
PRKCB-210ENST00000498739 TSHZ1Q6ZSZ6 1077 aa18.69■□□□□ 0.58
PRKCB-210ENST00000498739 SEPT8Q92599 483 aa18.69■□□□□ 0.58
PRKCB-210ENST00000498739 ZNF668Q96K58 619 aaPredicted RBP18.69■□□□□ 0.58
PRKCB-210ENST00000498739 AK8Q96MA6 479 aa18.69■□□□□ 0.58
PRKCB-210ENST00000498739 SCLT1Q96NL6 688 aa18.69■□□□□ 0.58
PRKCB-210ENST00000498739 OSMRQ99650 979 aa18.69■□□□□ 0.58
PRKCB-210ENST00000498739 MTRQ99707 1265 aa18.69■□□□□ 0.58
PRKCB-210ENST00000498739 MMTAG2Q9BU76 263 aaKnown RBP18.69■□□□□ 0.58
PRKCB-210ENST00000498739 IFIH1Q9BYX4 1025 aaKnown RBP18.69■□□□□ 0.58
PRKCB-210ENST00000498739 CDHR5Q9HBB8 845 aa18.69■□□□□ 0.58
PRKCB-210ENST00000498739 SUCLA2Q9P2R7 463 aaPredicted RBP18.69■□□□□ 0.58
PRKCB-210ENST00000498739 TFIP11Q9UBB9 837 aaKnown RBP18.69■□□□□ 0.58
PRKCB-210ENST00000498739 DBR1Q9UK59 544 aaKnown RBP18.69■□□□□ 0.58
PRKCB-210ENST00000498739 SIP14410 1827 aa18.69■□□□□ 0.58
PRKCB-210ENST00000498739 USO1O60763 962 aaKnown RBP18.68■□□□□ 0.58
PRKCB-210ENST00000498739 GPR32O75388 356 aa18.68■□□□□ 0.58
PRKCB-210ENST00000498739 BAIAP3O94812 1187 aa18.68■□□□□ 0.58
PRKCB-210ENST00000498739 BRD1O95696 1058 aa18.68■□□□□ 0.58
PRKCB-210ENST00000498739 LONP1P36776 959 aaKnown RBP18.68■□□□□ 0.58
PRKCB-210ENST00000498739 NASPP49321 788 aaPredicted RBP18.68■□□□□ 0.58
PRKCB-210ENST00000498739 IKBKEQ14164 716 aa18.68■□□□□ 0.58
PRKCB-210ENST00000498739 SLC39A14Q15043 492 aa18.68■□□□□ 0.58
PRKCB-210ENST00000498739 STK38Q15208 465 aa18.68■□□□□ 0.58
PRKCB-210ENST00000498739 LRIT3Q3SXY7 679 aa18.68■□□□□ 0.58
PRKCB-210ENST00000498739 TMEM143Q96AN5 459 aa18.68■□□□□ 0.58
PRKCB-210ENST00000498739 ATP6V0A4Q9HBG4 840 aa18.68■□□□□ 0.58
PRKCB-210ENST00000498739 FBXO2Q9UK22 296 aaPredicted RBP18.68■□□□□ 0.58
PRKCB-210ENST00000498739 SLC4A7Q9Y6M7 1214 aa18.68■□□□□ 0.58
PRKCB-210ENST00000498739 ARID2Q68CP9 1835 aa18.67■□□□□ 0.58
PRKCB-210ENST00000498739 ARHGEF35A5YM69 484 aa18.67■□□□□ 0.58
PRKCB-210ENST00000498739 GAS2O43903 313 aaKnown RBP18.67■□□□□ 0.58
PRKCB-210ENST00000498739 DGAT1O75907 488 aa18.67■□□□□ 0.58
PRKCB-210ENST00000498739 CD52P31358 61 aa18.67■□□□□ 0.58
PRKCB-210ENST00000498739 KCNJ6P48051 423 aa18.67■□□□□ 0.58
PRKCB-210ENST00000498739 GPC3P51654 580 aa18.67■□□□□ 0.58
PRKCB-210ENST00000498739 CRYBB1P53674 252 aaPredicted RBP18.67■□□□□ 0.58
PRKCB-210ENST00000498739 CABP7Q86V35 215 aa18.67■□□□□ 0.58
PRKCB-210ENST00000498739 RHPN2Q8IUC4 686 aa18.67■□□□□ 0.58
PRKCB-210ENST00000498739 USP38Q8NB14 1042 aa18.67■□□□□ 0.58
PRKCB-210ENST00000498739 TMEM40Q8WWA1 233 aa18.67■□□□□ 0.58
PRKCB-210ENST00000498739 NLRP7Q8WX94 980 aa18.67■□□□□ 0.58
PRKCB-210ENST00000498739 APBB2Q92870 758 aa18.67■□□□□ 0.58
PRKCB-210ENST00000498739 CDK5RAP3Q96JB5 506 aa18.67■□□□□ 0.58
PRKCB-210ENST00000498739 CSRNP2Q9H175 543 aa18.67■□□□□ 0.58
PRKCB-210ENST00000498739 AGO3Q9H9G7 860 aaKnown RBP18.67■□□□□ 0.58
PRKCB-210ENST00000498739 XPNPEP1Q9NQW7 623 aa18.67■□□□□ 0.58
PRKCB-210ENST00000498739 ZDHHC9Q9Y397 364 aa18.67■□□□□ 0.58
PRKCB-210ENST00000498739 SRPRBQ9Y5M8 271 aaKnown RBP18.67■□□□□ 0.58
PRKCB-210ENST00000498739 SQORQ9Y6N5 450 aa18.67■□□□□ 0.58
PRKCB-210ENST00000498739 MYH15Q9Y2K3 1946 aa18.66■□□□□ 0.58
PRKCB-210ENST00000498739 ABHD14A-ACY1A0A1B0GW23 586 aa18.66■□□□□ 0.58
PRKCB-210ENST00000498739 E9PMD0 336 aa18.66■□□□□ 0.58
PRKCB-210ENST00000498739 RPS6KA5O75582 802 aa18.66■□□□□ 0.58
PRKCB-210ENST00000498739 UBA7P41226 1012 aa18.66■□□□□ 0.58
PRKCB-210ENST00000498739 PAK2Q13177 524 aa18.66■□□□□ 0.58
PRKCB-210ENST00000498739 ZNF710Q8N1W2 664 aa18.66■□□□□ 0.58
PRKCB-210ENST00000498739 LINC00301Q8NCQ3 95 aa18.66■□□□□ 0.58
PRKCB-210ENST00000498739 TCP11Q8WWU5 503 aa18.66■□□□□ 0.58
PRKCB-210ENST00000498739 PSPC1Q8WXF1 523 aaKnown RBP18.66■□□□□ 0.58
PRKCB-210ENST00000498739 NLRP4Q96MN2 994 aa18.66■□□□□ 0.58
PRKCB-210ENST00000498739 PNMA5Q96PV4 448 aa18.66■□□□□ 0.58
PRKCB-210ENST00000498739 PLIN2Q99541 437 aa18.66■□□□□ 0.58
PRKCB-210ENST00000498739 NT5C3AQ9H0P0 336 aa18.66■□□□□ 0.58
PRKCB-210ENST00000498739 BHMT2Q9H2M3 363 aa18.66■□□□□ 0.58
PRKCB-210ENST00000498739 ADAMTS10Q9H324 1103 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms