RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 UBE4AQ14139 1066 aa14.12□□□□□ -0.15
GAPVD1-220ENST00000497580 SETDB1Q15047 1291 aa14.12□□□□□ -0.15
GAPVD1-220ENST00000497580 PUM3Q15397 648 aaKnown RBP14.12□□□□□ -0.15
GAPVD1-220ENST00000497580 HHATQ5VTY9 493 aa14.12□□□□□ -0.15
GAPVD1-220ENST00000497580 DTX3LQ8TDB6 740 aa14.12□□□□□ -0.15
GAPVD1-220ENST00000497580 C18orf8Q96DM3 657 aa14.12□□□□□ -0.15
GAPVD1-220ENST00000497580 GBP5Q96PP8 586 aa14.12□□□□□ -0.15
GAPVD1-220ENST00000497580 ERP44Q9BS26 406 aa14.12□□□□□ -0.15
GAPVD1-220ENST00000497580 TMEM165Q9HC07 324 aa14.12□□□□□ -0.15
GAPVD1-220ENST00000497580 MTRF1LQ9UGC7 380 aaKnown RBP14.12□□□□□ -0.15
GAPVD1-220ENST00000497580 MEGF6O75095 1541 aa14.12□□□□□ -0.15
GAPVD1-220ENST00000497580 RBAK-RBAKDNI3L0D1 243 aa14.12□□□□□ -0.15
GAPVD1-220ENST00000497580 H2AFZP0C0S5 128 aa14.12□□□□□ -0.15
GAPVD1-220ENST00000497580 GOLGA8HP0CJ92 632 aa14.12□□□□□ -0.15
GAPVD1-220ENST00000497580 EPHB2P29323 1055 aa14.12□□□□□ -0.15
GAPVD1-220ENST00000497580 H2AFVQ71UI9 128 aa14.12□□□□□ -0.15
GAPVD1-220ENST00000497580 APBB1IPQ7Z5R6 666 aaPredicted RBP14.12□□□□□ -0.15
GAPVD1-220ENST00000497580 DDX50Q9BQ39 737 aaKnown RBP14.12□□□□□ -0.15
GAPVD1-220ENST00000497580 RXFP1Q9HBX9 757 aa14.12□□□□□ -0.15
GAPVD1-220ENST00000497580 RIC1Q4ADV7 1423 aa14.12□□□□□ -0.15
GAPVD1-220ENST00000497580 CETN3O15182 167 aa14.12□□□□□ -0.15
GAPVD1-220ENST00000497580 MARCH6O60337 910 aa14.12□□□□□ -0.15
GAPVD1-220ENST00000497580 SLC9A1P19634 815 aa14.12□□□□□ -0.15
GAPVD1-220ENST00000497580 ATP6V1C1P21283 382 aa14.12□□□□□ -0.15
GAPVD1-220ENST00000497580 EXOC3L1Q86VI1 746 aa14.12□□□□□ -0.15
GAPVD1-220ENST00000497580 JAMLQ86YT9 394 aa14.12□□□□□ -0.15
GAPVD1-220ENST00000497580 PGM2Q96G03 612 aa14.12□□□□□ -0.15
GAPVD1-220ENST00000497580 FAM210AQ96ND0 272 aa14.12□□□□□ -0.15
GAPVD1-220ENST00000497580 C7orf25Q9BPX7 421 aa14.12□□□□□ -0.15
GAPVD1-220ENST00000497580 EPB41L4BQ9H329 900 aa14.12□□□□□ -0.15
GAPVD1-220ENST00000497580 CUEDC2Q9H467 287 aa14.12□□□□□ -0.15
GAPVD1-220ENST00000497580 MYH7P12883 1935 aa14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 UBTFL6P0CB48 400 aaPredicted RBP14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 CNGA1P29973 690 aa14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 LRRC55Q6ZSA7 311 aa14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 MIGA2Q7L4E1 593 aa14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 CCNJLQ8IV13 435 aa14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 PHC3Q8NDX5 983 aa14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 FAM81AQ8TBF8 368 aa14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 STK32AQ8WU08 396 aa14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 SPIRE2Q8WWL2 714 aa14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 KIFAP3Q92845 792 aa14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 UTP4Q969X6 686 aaKnown RBP14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 UBE2OQ9C0C9 1292 aaKnown RBP14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 STMN4Q9H169 189 aaPredicted RBP14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 PCMTD2Q9NV79 361 aa14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 CHCHD3Q9NX63 227 aaKnown RBP14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 WDR35Q9P2L0 1181 aa14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 DISP2A7MBM2 1401 aa14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 PEX11AO75192 247 aa14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 KCNA3P22001 575 aa14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 RCAN1P53805 252 aa14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 KIAA1755Q5JYT7 1200 aa14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 RFX8Q6ZV50 586 aa14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 MYOCDQ8IZQ8 938 aa14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 EIF1ADQ8N9N8 165 aaKnown RBP14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 MYLK2Q9H1R3 596 aa14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 NAGPAQ9UK23 515 aa14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 PCDHA6Q9UN73 950 aa14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 PCDHA8Q9Y5H6 950 aa14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 MYH1P12882 1939 aa14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 POTEMA6NI47 508 aa14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 CBX6O95503 412 aa14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 PPP1R2P41236 205 aa14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 AUHQ13825 339 aaKnown RBP14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 MAIP1Q8WWC4 291 aa14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 RBM41Q96IZ5 413 aaKnown RBP14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 ARMCX3Q9UH62 379 aaPredicted RBP14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 RASAL2Q9UJF2 1139 aa14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 RPS6KL1Q9Y6S9 549 aa14.11□□□□□ -0.15
GAPVD1-220ENST00000497580 NID2Q14112 1375 aa14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 STARD3NLO95772 234 aa14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 ZCCHC18P0CG32 403 aa14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 TPBGLP0DKB5 382 aa14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 BRAFP15056 766 aa14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 GM2AP17900 193 aa14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 GYG1P46976 350 aa14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 FKBP3Q00688 224 aaKnown RBP14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 PLS1Q14651 629 aa14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 GALNTL6Q49A17 601 aa14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 KLHL23Q8NBE8 558 aa14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 FAM13CQ8NE31 585 aa14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 DDX12PQ92771 950 aa14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 CYP39A1Q9NYL5 469 aa14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 ANKIB1Q9P2G1 1089 aa14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 C5P01031 1676 aa14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 GJB7Q6PEY0 223 aa14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 MTHFD1LQ6UB35 978 aa14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 ECHDC2Q86YB7 292 aa14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 LARP4BQ92615 738 aaKnown RBP14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 PITPNM3Q9BZ71 974 aa14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 UBA5Q9GZZ9 404 aa14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 TXLNGQ9NUQ3 528 aa14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 FBXO3Q9UK99 471 aa14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 NVLO15381 856 aaKnown RBP14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 RAD21O60216 631 aa14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 DDAH1O94760 285 aa14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 UNC5CO95185 931 aa14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 CYP2D6P10635 497 aa14.1□□□□□ -0.15
GAPVD1-220ENST00000497580 NAPAP54920 295 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms