RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 NXPE1Q8N323 547 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 IGSF22Q8N9C0 903 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 DAGLBQ8NCG7 672 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 IL17REQ8NFR9 667 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 MYRIPQ8NFW9 859 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 PIWIL2Q8TC59 973 aaKnown RBP3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 CHTF18Q8WVB6 975 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 DPF3Q92784 378 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 PHF20Q9BVI0 1012 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 CARD10Q9BWT7 1032 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 NAA15Q9BXJ9 866 aaKnown RBP3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 HDAC8Q9BY41 377 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 HELZ2Q9BYK8 2649 aaKnown RBP3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 NLRC4Q9NPP4 1024 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 PLCB1Q9NQ66 1216 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 OXSMQ9NWU1 459 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 USP36Q9P275 1121 aaKnown RBP3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 GJD2Q9UKL4 321 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 PNMA2Q9UL42 364 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 INTUQ9ULD6 942 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 ZBTB21Q9ULJ3 1066 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 ZKSCAN5Q9Y2L8 839 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 ZNF281Q9Y2X9 895 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 PCDHA8Q9Y5H6 950 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 BACE2Q9Y5Z0 518 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 CSADQ9Y600 493 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 RPS6KL1Q9Y6S9 549 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 SCINQ9Y6U3 715 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 CDH23Q9H251 3354 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 MYO18BQ8IUG5 2567 aa3.06□□□□□ -1.92
CKS1BP2-201ENST00000497342 SLIT3O75094 1523 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 ACEP12821 1306 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 TTC21AQ8NDW8 1320 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 KLHL33A6NCF5 533 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 FAM155AB1AL88 458 aaPredicted RBP3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 WDR64B1ANS9 1081 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 H3BML4 177 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 M0R082 166 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 TPP1O14773 563 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 MSCO60682 206 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 WDHD1O75717 1129 aaPredicted RBP3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 TUSC2O75896 110 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 APPP05067 770 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 CENPBP07199 599 aaPredicted RBP3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 NBPF7P0C2Y1 421 aaPredicted RBP3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 ZNF865P0CJ78 1059 aaPredicted RBP3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 SRGNP10124 158 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 MYBL2P10244 700 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 EPHX2P34913 555 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 WASP42768 502 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 CTSKP43235 329 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 SARSP49591 514 aaKnown RBP3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 NEK3P51956 506 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 KPNA1P52294 538 aaPredicted RBP3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 AK2P54819 239 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 NLRP12P59046 1061 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 IL2P60568 153 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 KIF23Q02241 960 aaPredicted RBP3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 TBC1D8BQ0IIM8 1120 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 SCRN1Q12765 414 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 SART3Q15020 963 aaKnown RBP3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 PRSS53Q2L4Q9 553 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 PKDCCQ504Y2 493 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 COBLL1Q53SF7 1204 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 PRR16Q569H4 304 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 TMEM31Q5JXX7 168 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 DGKKQ5KSL6 1271 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 DUSP27Q5VZP5 1158 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 EEF1DP3Q658K8 133 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 IL31Q6EBC2 164 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 C1orf229Q6ZS94 237 aaPredicted RBP3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 USP53Q70EK8 1073 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 CHSY3Q70JA7 882 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 PPIL6Q8IXY8 311 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 KIAA0319LQ8IZA0 1049 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 ZNF417Q8TAU3 575 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 NUDT8Q8WV74 236 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 SNRNP27Q8WVK2 155 aaKnown RBP3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 DIO2Q92813 273 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 BRF1Q92994 677 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 HPS3Q969F9 1004 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 ACAP3Q96P50 834 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 ZNF587Q96SQ5 575 aaPredicted RBP3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 NAP1L4Q99733 375 aaKnown RBP3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 PTPN18Q99952 460 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 DPH2Q9BQC3 489 aaPredicted RBP3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 ISCA1Q9BUE6 129 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 BOCQ9BWV1 1114 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 GPR62Q9BZJ7 368 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 ZDHHC5Q9C0B5 715 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 WNT8AQ9H1J5 351 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 NOL6Q9H6R4 1146 aaKnown RBP3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 JADE2Q9NQC1 790 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 GPATCH2Q9NW75 528 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 LUZP4Q9P127 313 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 STAP2Q9UGK3 403 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 DDX20Q9UHI6 824 aaKnown RBP3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 HACL1Q9UJ83 578 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 DNM3Q9UQ16 869 aa3.05□□□□□ -1.92
CKS1BP2-201ENST00000497342 LZTS1Q9Y250 596 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms