RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 MAP3K12Q12852 859 aa6.92□□□□□ -1.3
SNX13-211ENST00000496855 SLFN12LQ6IEE8 588 aa6.92□□□□□ -1.3
SNX13-211ENST00000496855 SCYL1Q96KG9 808 aa6.92□□□□□ -1.3
SNX13-211ENST00000496855 TUBGCP5Q96RT8 1024 aa6.92□□□□□ -1.3
SNX13-211ENST00000496855 ZMAT4Q9H898 229 aa6.92□□□□□ -1.3
SNX13-211ENST00000496855 SPTLC3Q9NUV7 552 aa6.92□□□□□ -1.3
SNX13-211ENST00000496855 ADCYAP1R1P41586 468 aa6.91□□□□□ -1.3
SNX13-211ENST00000496855 LSSP48449 732 aa6.91□□□□□ -1.3
SNX13-211ENST00000496855 MASP1P48740 699 aa6.91□□□□□ -1.3
SNX13-211ENST00000496855 IL2P60568 153 aa6.91□□□□□ -1.3
SNX13-211ENST00000496855 SMAD3P84022 425 aaKnown RBP6.91□□□□□ -1.3
SNX13-211ENST00000496855 PLP2Q04941 152 aa6.91□□□□□ -1.3
SNX13-211ENST00000496855 ZNF827Q17R98 1081 aa6.91□□□□□ -1.3
SNX13-211ENST00000496855 PRAMEF9Q5VWM5 478 aa6.91□□□□□ -1.3
SNX13-211ENST00000496855 EGFLAMQ63HQ2 1017 aa6.91□□□□□ -1.3
SNX13-211ENST00000496855 TRIM68Q6AZZ1 485 aa6.91□□□□□ -1.3
SNX13-211ENST00000496855 RTF1Q92541 710 aaKnown RBP6.91□□□□□ -1.3
SNX13-211ENST00000496855 RBM15Q96T37 977 aaKnown RBP eCLIP6.91□□□□□ -1.3
SNX13-211ENST00000496855 FKBP9O95302 570 aa6.9□□□□□ -1.31
SNX13-211ENST00000496855 CNOT4O95628 575 aaKnown RBP6.9□□□□□ -1.31
SNX13-211ENST00000496855 ITGB3P05106 788 aa6.9□□□□□ -1.31
SNX13-211ENST00000496855 CELA3BP08861 270 aa6.9□□□□□ -1.31
SNX13-211ENST00000496855 STAT3P40763 770 aa6.9□□□□□ -1.31
SNX13-211ENST00000496855 RRADP55042 308 aa6.9□□□□□ -1.31
SNX13-211ENST00000496855 LRRC32Q14392 662 aa6.9□□□□□ -1.31
SNX13-211ENST00000496855 DHCR24Q15392 516 aa6.9□□□□□ -1.31
SNX13-211ENST00000496855 ZMAT1Q5H9K5 638 aa6.9□□□□□ -1.31
SNX13-211ENST00000496855 LARP4Q71RC2 724 aaKnown RBP eCLIP6.9□□□□□ -1.31
SNX13-211ENST00000496855 FKBP9P1Q75LS8 142 aa6.9□□□□□ -1.31
SNX13-211ENST00000496855 PHYKPLQ8IUZ5 450 aa6.9□□□□□ -1.31
SNX13-211ENST00000496855 C7orf31Q8N865 590 aa6.9□□□□□ -1.31
SNX13-211ENST00000496855 CAAP1Q9H8G2 361 aa6.9□□□□□ -1.31
SNX13-211ENST00000496855 PPP4R1LQ9P1A2 415 aa6.9□□□□□ -1.31
SNX13-211ENST00000496855 CD40P25942 277 aa6.89□□□□□ -1.31
SNX13-211ENST00000496855 MYBPC3Q14896 1274 aa6.89□□□□□ -1.31
SNX13-211ENST00000496855 NOLC1Q14978 699 aaKnown RBP eCLIP6.89□□□□□ -1.31
SNX13-211ENST00000496855 ZNF568Q3ZCX4 644 aa6.89□□□□□ -1.31
SNX13-211ENST00000496855 GPR158Q5T848 1215 aa6.89□□□□□ -1.31
SNX13-211ENST00000496855 DDX46Q7L014 1031 aaKnown RBP6.89□□□□□ -1.31
SNX13-211ENST00000496855 C11orf74Q86VG3 221 aa6.89□□□□□ -1.31
SNX13-211ENST00000496855 BCL6BQ8N143 479 aaPredicted RBP6.89□□□□□ -1.31
SNX13-211ENST00000496855 JADE2Q9NQC1 790 aa6.89□□□□□ -1.31
SNX13-211ENST00000496855 CNOT11Q9UKZ1 510 aaKnown RBP6.89□□□□□ -1.31
SNX13-211ENST00000496855 BPIP17213 487 aa6.88□□□□□ -1.31
SNX13-211ENST00000496855 SOX5P35711 763 aa6.88□□□□□ -1.31
SNX13-211ENST00000496855 STAT5BP51692 787 aa6.88□□□□□ -1.31
SNX13-211ENST00000496855 PHC1P78364 1004 aa6.88□□□□□ -1.31
SNX13-211ENST00000496855 PCOLCEQ15113 449 aa6.88□□□□□ -1.31
SNX13-211ENST00000496855 SLFN13Q68D06 897 aa6.88□□□□□ -1.31
SNX13-211ENST00000496855 TIGD7Q6NT04 549 aaPredicted RBP6.88□□□□□ -1.31
SNX13-211ENST00000496855 RTKN2Q8IZC4 609 aa6.88□□□□□ -1.31
SNX13-211ENST00000496855 UBR7Q8N806 425 aa6.88□□□□□ -1.31
SNX13-211ENST00000496855 CHAC2Q8WUX2 184 aa6.88□□□□□ -1.31
SNX13-211ENST00000496855 USP7Q93009 1102 aa6.88□□□□□ -1.31
SNX13-211ENST00000496855 PTPN18Q99952 460 aa6.88□□□□□ -1.31
SNX13-211ENST00000496855 SSBP3Q9BWW4 388 aaPredicted RBP6.88□□□□□ -1.31
SNX13-211ENST00000496855 KIAA1683Q9H0B3 1180 aa6.88□□□□□ -1.31
SNX13-211ENST00000496855 POFUT1Q9H488 388 aa6.88□□□□□ -1.31
SNX13-211ENST00000496855 SEC61A2Q9H9S3 476 aa6.88□□□□□ -1.31
SNX13-211ENST00000496855 EMC7Q9NPA0 242 aa6.88□□□□□ -1.31
SNX13-211ENST00000496855 KCMF1Q9P0J7 381 aa6.88□□□□□ -1.31
SNX13-211ENST00000496855 NPEPPSL1A6NEC2 478 aa6.87□□□□□ -1.31
SNX13-211ENST00000496855 PRPF6O94906 941 aaKnown RBP6.87□□□□□ -1.31
SNX13-211ENST00000496855 MRE11P49959 708 aa6.87□□□□□ -1.31
SNX13-211ENST00000496855 MEOX1P50221 254 aa6.87□□□□□ -1.31
SNX13-211ENST00000496855 BCAR1P56945 870 aa6.87□□□□□ -1.31
SNX13-211ENST00000496855 ADCY2Q08462 1091 aa6.87□□□□□ -1.31
SNX13-211ENST00000496855 AGBL4Q5VU57 503 aa6.87□□□□□ -1.31
SNX13-211ENST00000496855 GLB1LQ6UWU2 654 aa6.87□□□□□ -1.31
SNX13-211ENST00000496855 KANSL1Q7Z3B3 1105 aa6.87□□□□□ -1.31
SNX13-211ENST00000496855 LIMS2Q7Z4I7 341 aa6.87□□□□□ -1.31
SNX13-211ENST00000496855 FILIP1Q7Z7B0 1213 aa6.87□□□□□ -1.31
SNX13-211ENST00000496855 ZNF610Q8N9Z0 462 aa6.87□□□□□ -1.31
SNX13-211ENST00000496855 OR5AN1Q8NGI8 311 aa6.87□□□□□ -1.31
SNX13-211ENST00000496855 MYL10Q9BUA6 226 aa6.87□□□□□ -1.31
SNX13-211ENST00000496855 MEGF9Q9H1U4 602 aa6.87□□□□□ -1.31
SNX13-211ENST00000496855 USP36Q9P275 1121 aaKnown RBP6.87□□□□□ -1.31
SNX13-211ENST00000496855 B8ZZF3 427 aa6.86□□□□□ -1.31
SNX13-211ENST00000496855 K7ESM1 405 aa6.86□□□□□ -1.31
SNX13-211ENST00000496855 LSP1P33241 339 aa6.86□□□□□ -1.31
SNX13-211ENST00000496855 STRN3Q13033 797 aa6.86□□□□□ -1.31
SNX13-211ENST00000496855 TERF2Q15554 542 aa6.86□□□□□ -1.31
SNX13-211ENST00000496855 DGKDQ16760 1214 aa6.86□□□□□ -1.31
SNX13-211ENST00000496855 RNF151Q2KHN1 245 aa6.86□□□□□ -1.31
SNX13-211ENST00000496855 LCE1DQ5T752 114 aa6.86□□□□□ -1.31
SNX13-211ENST00000496855 RPGRQ92834 1020 aaKnown RBP6.86□□□□□ -1.31
SNX13-211ENST00000496855 ZNF496Q96IT1 587 aaPredicted RBP6.86□□□□□ -1.31
SNX13-211ENST00000496855 OR10A2Q9H208 303 aa6.86□□□□□ -1.31
SNX13-211ENST00000496855 IFT22Q9H7X7 185 aa6.86□□□□□ -1.31
SNX13-211ENST00000496855 SAE1Q9UBE0 346 aaPredicted RBP6.86□□□□□ -1.31
SNX13-211ENST00000496855 MAGEL2Q9UJ55 1249 aa6.86□□□□□ -1.31
SNX13-211ENST00000496855 PRKAB1Q9Y478 270 aa6.86□□□□□ -1.31
SNX13-211ENST00000496855 NEMP1O14524 444 aa6.85□□□□□ -1.31
SNX13-211ENST00000496855 ZEB2O60315 1214 aa6.85□□□□□ -1.31
SNX13-211ENST00000496855 APOL3O95236 402 aa6.85□□□□□ -1.31
SNX13-211ENST00000496855 VIL1P09327 827 aaKnown RBP6.85□□□□□ -1.31
SNX13-211ENST00000496855 ANTXR2P58335 489 aa6.85□□□□□ -1.31
SNX13-211ENST00000496855 RAC3P60763 192 aa6.85□□□□□ -1.31
SNX13-211ENST00000496855 NFYCQ13952 458 aa6.85□□□□□ -1.31
SNX13-211ENST00000496855 TBR1Q16650 682 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms